RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 ScaperF8VQ70 1398 aaKnown RBP31.78■■■□□ 2.68
Ccdc9-202ENSMUST00000118976 Q4VA45 678 aa31.77■■■□□ 2.68
Ccdc9-202ENSMUST00000118976 Usp32F8VPZ3 1604 aa31.76■■■□□ 2.68
Ccdc9-202ENSMUST00000118976 VgfQ0VGU4 617 aa31.75■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Cgnl1Q6AW69 1298 aa31.75■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 ImpactO55091 318 aa31.75■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Vamp4O70480 141 aa31.74■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 CenppQ9CZ92 286 aa31.74■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Trim27Q62158 513 aa31.74■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Anapc15-psA0A140T8L6 141 aa31.73■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Rasa1E9PYG6 1038 aa31.71■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Fez1Q8K0X8 392 aa31.71■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Cdc37l1Q9CZP7 335 aa31.71■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Ripk4Q9ERK0 786 aa31.71■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Vsig10D3YX43 558 aa31.7■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Zkscan1Q8BGS3 561 aaKnown RBP31.7■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Aldh8a1Q8BH00 487 aa31.7■■■□□ 2.67
Ccdc9-202ENSMUST00000118976 Slc12a5Q91V14 1138 aa31.7■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Zranb1Q7M760 708 aa31.69■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Erich6bQ9D4S6 220 aa31.69■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Ush1cQ9ES64 910 aa31.68■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Gse1Q3U3C9 1213 aa31.68■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Ppip5k2Q6ZQB6 1129 aa31.68■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Erbb4Q61527 1308 aa31.67■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Pdia4P08003 638 aaKnown RBP31.67■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 PtmaP26350 111 aa31.66■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 PalmQ9Z0P4 383 aa31.66■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Mroh1E0CZ22 1640 aa31.65■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Rbm10Q99KG3 930 aaKnown RBP31.65■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Eif4g2Q62448 906 aaKnown RBP31.64■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Ccdc146E9Q9F7 977 aa31.64■■■□□ 2.66
Ccdc9-202ENSMUST00000118976 Gcc1Q9D4H2 778 aa31.63■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Zfp777B9EKF4 885 aa31.62■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 HnrnpuQ8VEK3 800 aaKnown RBP31.62■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 4931400O07RikQ9D4M5 137 aa31.62■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Arid3cA6PWV5 409 aa31.61■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Nom1Q3UFM5 854 aaKnown RBP31.61■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Trim28Q62318 834 aa31.61■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Mknk2Q8CDB0 459 aa31.61■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Stk26Q99JT2 416 aa31.61■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 NinlQ6ZQ12 1394 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Ppp6r3Q922D4 844 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Gli2Q0VGT2 1544 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Gnai1B2RSH2 354 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Mcm2P97310 904 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Gnai3Q9DC51 354 aa31.6■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Gm156Q58A37 223 aa31.59■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Becn1O88597 448 aa31.58■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 PtmsQ9D0J8 101 aaKnown RBP31.58■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Nucb1Q02819 459 aaKnown RBP31.58■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Mdc1Q5PSV9 1707 aa31.58■■■□□ 2.65
Ccdc9-202ENSMUST00000118976 Cavin2Q63918 418 aaKnown RBP31.57■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Elp1Q7TT37 1333 aaKnown RBP31.57■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Gsto1O09131 240 aa31.57■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Arhgap23Q69ZH9 1483 aa31.56■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Pdia3P27773 505 aaKnown RBP31.56■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Gm9992B2RWK3 458 aa31.55■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Unc93aQ710D3 458 aa31.55■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Cyp27a1Q9DBG1 533 aa31.54■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 CltcQ68FD5 1675 aaKnown RBP31.54■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Irf5P56477 497 aa31.54■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Stk11ipQ3TAA7 1072 aa31.53■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 FanclQ9CR14 375 aa31.53■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Zdhhc9P59268 364 aa31.52■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 MarsQ68FL6 902 aaKnown RBP31.52■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Aldh1l2Q8K009 923 aa31.51■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 OvosQ3UU35 1456 aa31.51■■■□□ 2.64
Ccdc9-202ENSMUST00000118976 Ptch1Q61115 1434 aa31.49■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Pnma3Q8JZW8 466 aa31.48■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Rab11fip3Q8CHD8 1047 aa31.47■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Ric3Q8BPM6 367 aa31.47■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Synj2Q9D2G5 1434 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Usp16Q99LG0 825 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Ppp1r15aP17564 657 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Tm6sf1P58749 370 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Gzf1Q4VBD9 706 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Kdm4aQ8BW72 1064 aa31.46■■■□□ 2.63
Ccdc9-202ENSMUST00000118976 Atp10aO54827 1508 aa31.45■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Cdk19Q8BWD8 501 aa31.44■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Cep170bQ80U49 1574 aa31.44■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Sos1Q62245 1319 aa31.44■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Mrps27Q8BK72 415 aaKnown RBP31.44■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Fam13aQ8BGI4 693 aa31.43■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Knl1Q66JQ7 1612 aa31.43■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Pank2Q3U4S0 443 aa31.43■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Rcan3Q9JKK0 239 aa31.43■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Triml2E9PW10 424 aa31.41■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Zscan25B2RX31 543 aa31.41■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Ecm2Q5FW85 670 aa31.41■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Syce3B5KM66 88 aa31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Shq1Q7TMX5 569 aa31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Glipr1l2Q9CQ35 332 aa31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Gdpd2Q9ESM6 539 aa31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Rnf123Q5XPI3 1314 aa31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Senp3Q9EP97 568 aaKnown RBP31.4■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 Kif24Q6NWW5 1356 aa31.39■■■□□ 2.62
Ccdc9-202ENSMUST00000118976 PtprmP28828 1452 aa31.38■■■□□ 2.61
Ccdc9-202ENSMUST00000118976 Atp1b4Q99ME6 356 aa31.38■■■□□ 2.61
Ccdc9-202ENSMUST00000118976 Arhgef28P97433 1693 aa31.37■■■□□ 2.61
Ccdc9-202ENSMUST00000118976 Gripap1Q8VD04 806 aa31.37■■■□□ 2.61
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms