RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Tnpo1Q8BFY9 898 aaKnown RBP16.57■□□□□ 0.24
Chfr-202ENSMUST00000112519 Ppp2r3aB2RXC8 1150 aa16.56■□□□□ 0.24
Chfr-202ENSMUST00000112519 Gm10563F6WIE4 79 aa16.56■□□□□ 0.24
Chfr-202ENSMUST00000112519 Uhrf1bp1B2KF50 1429 aa16.56■□□□□ 0.24
Chfr-202ENSMUST00000112519 G3bp1P97855 465 aaKnown RBP16.56■□□□□ 0.24
Chfr-202ENSMUST00000112519 Kif1aP33173 1695 aa16.56■□□□□ 0.24
Chfr-202ENSMUST00000112519 Aplp1Q03157 653 aa16.55■□□□□ 0.24
Chfr-202ENSMUST00000112519 Rreb1Q3UH06 1700 aaKnown RBP16.55■□□□□ 0.24
Chfr-202ENSMUST00000112519 PaskQ8CEE6 1383 aa16.55■□□□□ 0.24
Chfr-202ENSMUST00000112519 Tmem94Q7TSH8 1360 aa16.54■□□□□ 0.24
Chfr-202ENSMUST00000112519 Fgd1P52734 960 aa16.54■□□□□ 0.24
Chfr-202ENSMUST00000112519 1700019A02RikA0A087WPV9 146 aa16.53■□□□□ 0.24
Chfr-202ENSMUST00000112519 Ncbp3Q8BZR9 615 aaKnown RBP16.53■□□□□ 0.24
Chfr-202ENSMUST00000112519 Ciz1Q8VEH2 845 aa16.53■□□□□ 0.24
Chfr-202ENSMUST00000112519 Pibf1E9Q6K3 756 aa16.53■□□□□ 0.24
Chfr-202ENSMUST00000112519 Ppp1r9bQ6R891 817 aaKnown RBP16.53■□□□□ 0.24
Chfr-202ENSMUST00000112519 AU019823E9PUQ3 292 aa16.52■□□□□ 0.24
Chfr-202ENSMUST00000112519 Plekhm2Q80TQ5 1018 aa16.52■□□□□ 0.24
Chfr-202ENSMUST00000112519 Usp16Q99LG0 825 aa16.52■□□□□ 0.24
Chfr-202ENSMUST00000112519 Vamp4O70480 141 aa16.52■□□□□ 0.23
Chfr-202ENSMUST00000112519 Snap23O09044 210 aa16.51■□□□□ 0.23
Chfr-202ENSMUST00000112519 Cabp4Q8VHC5 271 aa16.51■□□□□ 0.23
Chfr-202ENSMUST00000112519 N4bp2F8VQG7 1678 aaKnown RBP16.51■□□□□ 0.23
Chfr-202ENSMUST00000112519 Slc35g1Q8BY79 368 aa16.51■□□□□ 0.23
Chfr-202ENSMUST00000112519 Atp7bQ64446 1462 aa16.51■□□□□ 0.23
Chfr-202ENSMUST00000112519 Gm21190A0A0G2JGJ6 266 aa16.5■□□□□ 0.23
Chfr-202ENSMUST00000112519 Parp14Q2EMV9 1817 aa16.5■□□□□ 0.23
Chfr-202ENSMUST00000112519 Spef2Q8C9J3 1734 aa16.5■□□□□ 0.23
Chfr-202ENSMUST00000112519 Q3UPC7 1272 aa16.49■□□□□ 0.23
Chfr-202ENSMUST00000112519 Nsd3Q6P2L6 1439 aa16.49■□□□□ 0.23
Chfr-202ENSMUST00000112519 Stk31Q99MW1 1018 aa16.49■□□□□ 0.23
Chfr-202ENSMUST00000112519 Dennd6aQ8BH65 605 aa16.48■□□□□ 0.23
Chfr-202ENSMUST00000112519 GorabQ8BRM2 368 aa16.48■□□□□ 0.23
Chfr-202ENSMUST00000112519 Nlgn1Q99K10 843 aa16.48■□□□□ 0.23
Chfr-202ENSMUST00000112519 Abcc10Q8R4P9 1501 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Znf541Q0GGX2 1363 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 MlecQ6ZQI3 291 aaKnown RBP16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 FancaQ9JL70 1439 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Astn2Q80Z10 1352 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Gnai1B2RSH2 354 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Sirt1Q923E4 737 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Gnai3Q9DC51 354 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Kif20bQ80WE4 1774 aaKnown RBP16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Ccdc171E9Q1U1 1324 aa16.47■□□□□ 0.23
Chfr-202ENSMUST00000112519 Vsig10D3YX43 558 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Sptbn5F6UCX4 1208 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Ggnbp2Q5SV77 696 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Hoxb7P09024 217 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Cog6Q8R3I3 657 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Ap3b2Q9JME5 1082 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Pik3c2aQ61194 1686 aa16.46■□□□□ 0.23
Chfr-202ENSMUST00000112519 Htatsf1Q8BGC0 757 aa16.46■□□□□ 0.22
Chfr-202ENSMUST00000112519 D430041D05RikF6ZGR6 1678 aa16.45■□□□□ 0.22
Chfr-202ENSMUST00000112519 Ccne1Q61457 408 aa16.45■□□□□ 0.22
Chfr-202ENSMUST00000112519 Tmem132eQ6IEE6 982 aa16.45■□□□□ 0.22
Chfr-202ENSMUST00000112519 GphnQ8BUV3 769 aaKnown RBP16.45■□□□□ 0.22
Chfr-202ENSMUST00000112519 Rfx1P48377 963 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Pknox2Q8BG99 474 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Frmpd2A0A140LI67 1392 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Zmym3Q9JLM4 1370 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Map2P20357 1828 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Arap3Q8R5G7 1538 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Prim1P20664 417 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Rabep1O35551 862 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Aifm3Q3TY86 605 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 TmpoQ61033 693 aaKnown RBP16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Kif18aQ91WD7 886 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Camta1A2A891 1682 aa16.44■□□□□ 0.22
Chfr-202ENSMUST00000112519 Eya1P97767 591 aa16.43■□□□□ 0.22
Chfr-202ENSMUST00000112519 Ubr1O70481 1757 aa16.42■□□□□ 0.22
Chfr-202ENSMUST00000112519 Map7O88735 730 aa16.42■□□□□ 0.22
Chfr-202ENSMUST00000112519 Aldh1l1Q8R0Y6 902 aa16.42■□□□□ 0.22
Chfr-202ENSMUST00000112519 Atl3Q91YH5 541 aa16.42■□□□□ 0.22
Chfr-202ENSMUST00000112519 C5P06684 1680 aa16.41■□□□□ 0.22
Chfr-202ENSMUST00000112519 Plcb2A3KGF7 1181 aa16.41■□□□□ 0.22
Chfr-202ENSMUST00000112519 Als2Q920R0 1651 aa16.41■□□□□ 0.22
Chfr-202ENSMUST00000112519 Cdk12Q14AX6 1484 aaKnown RBP16.41■□□□□ 0.22
Chfr-202ENSMUST00000112519 Med1Q925J9 1575 aa16.4■□□□□ 0.22
Chfr-202ENSMUST00000112519 Znf335A2A5K6 1337 aa16.4■□□□□ 0.22
Chfr-202ENSMUST00000112519 Stk11ipQ3TAA7 1072 aa16.39■□□□□ 0.21
Chfr-202ENSMUST00000112519 DekQ7TNV0 380 aaKnown RBP16.39■□□□□ 0.21
Chfr-202ENSMUST00000112519 CemipQ8BI06 1361 aa16.39■□□□□ 0.21
Chfr-202ENSMUST00000112519 NalcnQ8BXR5 1738 aa16.39■□□□□ 0.21
Chfr-202ENSMUST00000112519 Ccdc146E9Q9F7 977 aa16.38■□□□□ 0.21
Chfr-202ENSMUST00000112519 Tbc1d32Q3URV1 1296 aa16.38■□□□□ 0.21
Chfr-202ENSMUST00000112519 SkilQ60665 675 aa16.38■□□□□ 0.21
Chfr-202ENSMUST00000112519 Ric3Q8BPM6 367 aa16.38■□□□□ 0.21
Chfr-202ENSMUST00000112519 Catsper2A2ARP9 588 aa16.37■□□□□ 0.21
Chfr-202ENSMUST00000112519 Col16a1Q8BLX7 1580 aa16.37■□□□□ 0.21
Chfr-202ENSMUST00000112519 MvpQ9EQK5 861 aa16.37■□□□□ 0.21
Chfr-202ENSMUST00000112519 C3P01027 1663 aa16.36■□□□□ 0.21
Chfr-202ENSMUST00000112519 Mdc1Q5PSV9 1707 aa16.36■□□□□ 0.21
Chfr-202ENSMUST00000112519 Dnttip2Q8R2M2 758 aaKnown RBP16.36■□□□□ 0.21
Chfr-202ENSMUST00000112519 Irx6Q9ER75 438 aa16.36■□□□□ 0.21
Chfr-202ENSMUST00000112519 Hoxc9P09633 260 aa16.36■□□□□ 0.21
Chfr-202ENSMUST00000112519 Phlpp2Q8BXA7 1320 aa16.35■□□□□ 0.21
Chfr-202ENSMUST00000112519 Ankrd44B2RXR6 993 aa16.35■□□□□ 0.21
Chfr-202ENSMUST00000112519 KnstrnQ9D9Z1 312 aaKnown RBP16.35■□□□□ 0.21
Chfr-202ENSMUST00000112519 Tfip11Q9ERA6 838 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms