RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Bag4Q8CI61 457 aa17.27■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 BccipQ9CWI3 316 aa17.27■□□□□ 0.36
Hoxc4-201ENSMUST00000100164 Psme1P97371 249 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 PplQ9R269 1755 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Cetn4Q8K4K1 168 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Erich6bQ9D4S6 220 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Ppp1r3fQ9JIG4 799 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 P2rx7Q9Z1M0 595 aa17.26■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Myo3aQ8K3H5 1613 aa17.25■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 DnmbpQ6TXD4 1580 aa17.25■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 FanciQ8K368 1330 aa17.25■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Casq1O09165 405 aa17.25■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Chrna2Q91X60 512 aa17.25■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 1700010I14RikQ7TPG0 532 aa17.24■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Erich6D3Z6S9 713 aa17.24■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Usp40Q8BWR4 1235 aa17.24■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Cdk5rap2Q8K389 1822 aa17.23■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Prrc2bQ7TPM1 1486 aaKnown RBP17.23■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Cald1E9QA15 768 aaKnown RBP17.23■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Bloc1s4Q8VED2 215 aa17.22■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Mroh1E0CZ22 1640 aa17.22■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 ErbinQ80TH2 1402 aa17.22■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Bcl11bQ99PV8 884 aa17.22■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 CastP51125 788 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Znf316Q6PGE4 1016 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Ciz1Q8VEH2 845 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Stk24Q99KH8 431 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Trim26Q99PN3 545 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Thsd7aQ69ZU6 1645 aa17.21■□□□□ 0.35
Hoxc4-201ENSMUST00000100164 Tfip11Q9ERA6 838 aaKnown RBP17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Sipa1l1Q8C0T5 1782 aa17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Wdr63B2RY71 923 aa17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Maco1Q7TQE6 664 aaKnown RBP17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Pnma3Q8JZW8 466 aa17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Abca8aQ8K442 1620 aa17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Ccdc171E9Q1U1 1324 aa17.2■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Ehbp1l1Q99MS7 1716 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 PtmaP26350 111 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 LifrP42703 1092 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Tnnt2P50752 301 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Os9Q8K2C7 672 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Apaf1O88879 1249 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Gzf1Q4VBD9 706 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 PtmsQ9D0J8 101 aaKnown RBP17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 4931400O07RikQ9D4M5 137 aa17.19■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Rims1Q99NE5 1463 aa17.18■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Tbc1d9Q3UYK3 1264 aa17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Zkscan1Q8BGS3 561 aaKnown RBP17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Rps6ka5Q8C050 863 aa17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Ttc21aQ8C0S4 1314 aa17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 NcapgE9PWG6 1004 aa17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Srpk2O54781 681 aaKnown RBP17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Dhx30Q99PU8 1217 aaKnown RBP17.17■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Arhgef28P97433 1693 aa17.16■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Slit3Q9WVB4 1523 aa17.16■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 GapdhsQ64467 440 aa17.16■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 EngaseQ8BX80 734 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Chmp4bQ9D8B3 224 aaKnown RBP17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Sall3Q62255 1320 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Col18a1P39061 1774 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 IghaA0A0A6YXW6 389 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Rasa1E9PYG6 1038 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Kdm4aQ8BW72 1064 aa17.15■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Znf541Q0GGX2 1363 aa17.14■□□□□ 0.34
Hoxc4-201ENSMUST00000100164 Tsen2Q6P7W5 460 aa17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Gtf3c5Q8R2T8 520 aa17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 U2af1Q9D883 239 aaKnown RBP17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Dmrtc1Q9D9R7 182 aa17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Mdc1Q5PSV9 1707 aa17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 AatkQ80YE4 1365 aa17.14■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Anapc15-psA0A140T8L6 141 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Wdr78E9PYY5 807 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Mindy4Q3UQI9 744 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Gys2Q8VCB3 704 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Uhrf1bp1B2KF50 1429 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Ankrd50F7BE84 1390 aa17.13■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Fam43aQ8BUP8 424 aa17.12■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Ccdc94Q9D6J3 314 aa17.12■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Pik3r4Q8VD65 1358 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Fan1Q69ZT1 1020 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Cgnl1Q6AW69 1298 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Glipr1l2Q9CQ35 332 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Nek4Q9Z1J2 792 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Arap3Q8R5G7 1538 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 InsrP15208 1372 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 G3bp1P97855 465 aaKnown RBP17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Amigo3Q8C2S7 508 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 CenppQ9CZ92 286 aa17.11■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 MaddQ80U28 1577 aa17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Tns3Q5SSZ5 1440 aa17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 PaskQ8CEE6 1383 aa17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Scaf1Q5U4C3 1256 aaKnown RBP17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Ccdc60Q8C4J0 545 aa17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Rcan3Q9JKK0 239 aa17.1■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Gm45140A0A0N4SUM8 220 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Gm9992B2RWK3 458 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Tom1O88746 492 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Pank2Q3U4S0 443 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Unc93aQ710D3 458 aa17.09■□□□□ 0.33
Hoxc4-201ENSMUST00000100164 Plxnc1Q9QZC2 1574 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms