RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Txnrd1Q9JMH6 613 aa23.27■■□□□ 1.32
Clk4-201ENSMUST00000093132 Spef2Q8C9J3 1734 aa23.26■■□□□ 1.31
Clk4-201ENSMUST00000093132 Eya1P97767 591 aa23.25■■□□□ 1.31
Clk4-201ENSMUST00000093132 Arhgef1Q61210 920 aaKnown RBP23.25■■□□□ 1.31
Clk4-201ENSMUST00000093132 Uspl1Q3ULM6 1089 aa23.25■■□□□ 1.31
Clk4-201ENSMUST00000093132 Tcerg1Q8CGF7 1100 aaKnown RBP23.25■■□□□ 1.31
Clk4-201ENSMUST00000093132 Lrrc59Q922Q8 307 aaKnown RBP23.24■■□□□ 1.31
Clk4-201ENSMUST00000093132 Apaf1O88879 1249 aa23.23■■□□□ 1.31
Clk4-201ENSMUST00000093132 MpripP97434 1024 aa23.23■■□□□ 1.31
Clk4-201ENSMUST00000093132 Znf541Q0GGX2 1363 aa23.23■■□□□ 1.31
Clk4-201ENSMUST00000093132 Slx1bQ8BX32 270 aa23.21■■□□□ 1.31
Clk4-201ENSMUST00000093132 Q4VA45 678 aa23.2■■□□□ 1.3
Clk4-201ENSMUST00000093132 Ddx54Q8K4L0 874 aaKnown RBP23.2■■□□□ 1.3
Clk4-201ENSMUST00000093132 Kdm6aO70546 1401 aa23.2■■□□□ 1.3
Clk4-201ENSMUST00000093132 Mapk8ip3Q9ESN9 1337 aa23.19■■□□□ 1.3
Clk4-201ENSMUST00000093132 Mcm10Q0VBD2 885 aa23.18■■□□□ 1.3
Clk4-201ENSMUST00000093132 CrbnQ8C7D2 445 aa23.18■■□□□ 1.3
Clk4-201ENSMUST00000093132 OptnQ8K3K8 584 aa23.18■■□□□ 1.3
Clk4-201ENSMUST00000093132 CrklP47941 303 aa23.18■■□□□ 1.3
Clk4-201ENSMUST00000093132 Slit2Q9R1B9 1521 aa23.17■■□□□ 1.3
Clk4-201ENSMUST00000093132 TkfcQ8VC30 578 aa23.17■■□□□ 1.3
Clk4-201ENSMUST00000093132 Rtl5Q5DTT4 599 aa23.16■■□□□ 1.3
Clk4-201ENSMUST00000093132 Ofd1Q80Z25 1017 aa23.16■■□□□ 1.3
Clk4-201ENSMUST00000093132 TnikP83510 1323 aa23.16■■□□□ 1.3
Clk4-201ENSMUST00000093132 Pard3Q99NH2 1333 aa23.16■■□□□ 1.3
Clk4-201ENSMUST00000093132 Ncbp3Q8BZR9 615 aaKnown RBP23.15■■□□□ 1.3
Clk4-201ENSMUST00000093132 Col15a1O35206 1367 aa23.15■■□□□ 1.3
Clk4-201ENSMUST00000093132 RgmbQ7TQ33 436 aa23.14■■□□□ 1.3
Clk4-201ENSMUST00000093132 Ciz1Q8VEH2 845 aa23.14■■□□□ 1.3
Clk4-201ENSMUST00000093132 Stk31Q99MW1 1018 aa23.14■■□□□ 1.3
Clk4-201ENSMUST00000093132 Cavin4A2AMM0 362 aa23.14■■□□□ 1.29
Clk4-201ENSMUST00000093132 Slit1Q80TR4 1531 aa23.13■■□□□ 1.29
Clk4-201ENSMUST00000093132 Zfp444Q3TDV8 331 aaKnown RBP23.13■■□□□ 1.29
Clk4-201ENSMUST00000093132 Ggt6Q6PDE7 497 aa23.13■■□□□ 1.29
Clk4-201ENSMUST00000093132 Plin1Q8CGN5 517 aa23.13■■□□□ 1.29
Clk4-201ENSMUST00000093132 Iqcf3Q9D498 203 aa23.12■■□□□ 1.29
Clk4-201ENSMUST00000093132 Znf710Q3U288 666 aa23.12■■□□□ 1.29
Clk4-201ENSMUST00000093132 Ecm2Q5FW85 670 aa23.12■■□□□ 1.29
Clk4-201ENSMUST00000093132 Rad21Q61550 635 aaKnown RBP23.12■■□□□ 1.29
Clk4-201ENSMUST00000093132 Simc1E9Q6E9 1354 aa23.11■■□□□ 1.29
Clk4-201ENSMUST00000093132 FocadA2AKG8 1798 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Speer4f1Q9D5Q6 258 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Dusp27Q148W8 1138 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Fbxo41Q6NS60 873 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Nyap1Q6PFX7 833 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Ppp1r37Q8BKR5 712 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Rab11fip3Q8CHD8 1047 aa23.1■■□□□ 1.29
Clk4-201ENSMUST00000093132 Uhrf1bp1B2KF50 1429 aa23.09■■□□□ 1.29
Clk4-201ENSMUST00000093132 Gsdma3Q5Y4Y6 464 aa23.09■■□□□ 1.29
Clk4-201ENSMUST00000093132 Ralbp1Q62172 648 aa23.09■■□□□ 1.29
Clk4-201ENSMUST00000093132 Cabp2Q9JLK4 216 aa23.09■■□□□ 1.29
Clk4-201ENSMUST00000093132 HypkQ9CR41 129 aa23.08■■□□□ 1.29
Clk4-201ENSMUST00000093132 Plekhd1B2RPU2 505 aa23.08■■□□□ 1.28
Clk4-201ENSMUST00000093132 Gm10471E9Q1C7 252 aa23.06■■□□□ 1.28
Clk4-201ENSMUST00000093132 TmpoQ61033 693 aaKnown RBP23.06■■□□□ 1.28
Clk4-201ENSMUST00000093132 Swt1Q9DBQ9 907 aa23.06■■□□□ 1.28
Clk4-201ENSMUST00000093132 Sema6bO54951 886 aa23.05■■□□□ 1.28
Clk4-201ENSMUST00000093132 Zranb3Q6NZP1 1069 aa23.05■■□□□ 1.28
Clk4-201ENSMUST00000093132 Cntnap1O54991 1385 aa23.04■■□□□ 1.28
Clk4-201ENSMUST00000093132 Zeb2Q9R0G7 1215 aa23.04■■□□□ 1.28
Clk4-201ENSMUST00000093132 Neurod2Q62414 383 aa23.04■■□□□ 1.28
Clk4-201ENSMUST00000093132 Nhsl1Q8CAF4 1587 aa23.03■■□□□ 1.28
Clk4-201ENSMUST00000093132 Pak3Q61036 559 aa23.02■■□□□ 1.28
Clk4-201ENSMUST00000093132 Emilin2Q8K482 1074 aa23.02■■□□□ 1.28
Clk4-201ENSMUST00000093132 Larp1bA0A0A6YXJ7 370 aaKnown RBP23.02■■□□□ 1.28
Clk4-201ENSMUST00000093132 Amotl1Q9D4H4 968 aa23.02■■□□□ 1.28
Clk4-201ENSMUST00000093132 Trpm3Q5F4S9 1721 aa23.01■■□□□ 1.27
Clk4-201ENSMUST00000093132 Aplp2Q06335 707 aa23.01■■□□□ 1.27
Clk4-201ENSMUST00000093132 Zpr1Q62384 459 aa23.01■■□□□ 1.27
Clk4-201ENSMUST00000093132 Ccdc30Q8BVF4 654 aa23■■□□□ 1.27
Clk4-201ENSMUST00000093132 MypopQ8R4U1 393 aa23■■□□□ 1.27
Clk4-201ENSMUST00000093132 Arfgef2A2A5R2 1792 aa23■■□□□ 1.27
Clk4-201ENSMUST00000093132 Atxn3Q9CVD2 355 aa23■■□□□ 1.27
Clk4-201ENSMUST00000093132 ThemisQ8BGW0 636 aa22.99■■□□□ 1.27
Clk4-201ENSMUST00000093132 Ahnak2E9PYB0 1738 aaKnown RBP22.99■■□□□ 1.27
Clk4-201ENSMUST00000093132 Lrp6O88572 1613 aa22.98■■□□□ 1.27
Clk4-201ENSMUST00000093132 Shank2Q80Z38 1476 aa22.96■■□□□ 1.27
Clk4-201ENSMUST00000093132 Cc2d1aQ8K1A6 943 aa22.96■■□□□ 1.27
Clk4-201ENSMUST00000093132 Psrc1Q9D0P7 329 aa22.96■■□□□ 1.27
Clk4-201ENSMUST00000093132 Nup153E9Q3G8 1462 aaKnown RBP22.95■■□□□ 1.26
Clk4-201ENSMUST00000093132 Fnbp4Q6ZQ03 1031 aa22.94■■□□□ 1.26
Clk4-201ENSMUST00000093132 Anks4bQ8K3X6 423 aa22.94■■□□□ 1.26
Clk4-201ENSMUST00000093132 Adgrb1Q3UHD1 1582 aa22.93■■□□□ 1.26
Clk4-201ENSMUST00000093132 Ccdc129Q14B48 1034 aa22.93■■□□□ 1.26
Clk4-201ENSMUST00000093132 Rtf1A2AQ19 715 aaKnown RBP22.92■■□□□ 1.26
Clk4-201ENSMUST00000093132 4930572O03RikQ8C5Y0 211 aa22.92■■□□□ 1.26
Clk4-201ENSMUST00000093132 Fam50bQ9WTJ8 334 aa22.92■■□□□ 1.26
Clk4-201ENSMUST00000093132 Cypt2Q6P924 180 aa22.92■■□□□ 1.26
Clk4-201ENSMUST00000093132 InhbeO08717 350 aa22.91■■□□□ 1.26
Clk4-201ENSMUST00000093132 Tnks1bp1P58871 1720 aa22.91■■□□□ 1.26
Clk4-201ENSMUST00000093132 Pm20d1Q8C165 503 aa22.9■■□□□ 1.26
Clk4-201ENSMUST00000093132 Aox2Q5SGK3 1345 aa22.9■■□□□ 1.26
Clk4-201ENSMUST00000093132 Snap23O09044 210 aa22.9■■□□□ 1.26
Clk4-201ENSMUST00000093132 Akap11E9Q777 1895 aa22.89■■□□□ 1.26
Clk4-201ENSMUST00000093132 Tns2Q8CGB6 1400 aa22.89■■□□□ 1.26
Clk4-201ENSMUST00000093132 Eno4Q8C042 619 aa22.89■■□□□ 1.25
Clk4-201ENSMUST00000093132 Sf3b2Q3UJB0 878 aaKnown RBP22.87■■□□□ 1.25
Clk4-201ENSMUST00000093132 Ttc21aQ8C0S4 1314 aa22.87■■□□□ 1.25
Clk4-201ENSMUST00000093132 Ankrd50F7BE84 1390 aa22.87■■□□□ 1.25
Clk4-201ENSMUST00000093132 Fer1l6E0CZ42 1862 aa22.86■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms