RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Ell2Q3UKU1 639 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Lrrcc1Q69ZB0 1026 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 A0A1L1SQF0 893 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Exoc5Q3TPX4 708 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Sf3a1Q8K4Z5 791 aaKnown RBP9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Psma5Q9Z2U1 241 aaKnown RBP9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ccne1Q61457 408 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 TnikP83510 1323 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Sos1Q62245 1319 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Trappc8E9PWG2 1437 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Exoc6bA6H5Z3 810 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Dixdc1Q80Y83 711 aa9□□□□□ -0.97
Usp40-201ENSMUST00000040783 Abl1P00520 1123 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Hoxa7P02830 229 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Hmgb1P63158 215 aaKnown RBP8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Washc4Q3UMB9 1173 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Glipr1l2Q9CQ35 332 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Stk3Q9JI10 497 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Odf2A3KGV1 830 aaKnown RBP8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Trim30aP15533 496 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Mical1Q8VDP3 1048 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Prkrip1Q9CWV6 186 aaKnown RBP8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Sh3bgrQ9WUZ7 214 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Pde4dQ01063 747 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Tpm4Q6IRU2 248 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ankib1Q6ZPS6 1085 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Smc3Q9CW03 1217 aaKnown RBP8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Gm1043A0A140LJC2 1431 aa8.99□□□□□ -0.97
Usp40-201ENSMUST00000040783 Kif21aQ9QXL2 1672 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Fkbp5Q64378 456 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ttc5Q99LG4 440 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ak7Q9D2H2 614 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Odf2lQ9D478 642 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Nek4Q9Z1J2 792 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 BC005561E9Q5E2 1589 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Cwc27Q3TKY6 469 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Trim29Q8R2Q0 587 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Slx4Q6P1D7 1565 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 SlkO54988 1233 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Rbm28Q8CGC6 750 aaKnown RBP8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Emilin2Q8K482 1074 aa8.98□□□□□ -0.97
Usp40-201ENSMUST00000040783 Cspp1B2RX88 1205 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Gsdma2Q32M21 443 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Nol8Q3UHX0 1147 aaKnown RBP8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ncbp1Q3UYV9 790 aaKnown RBP8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Gcc1Q9D4H2 778 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Map4k4P97820 1233 aaKnown RBP8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Dusp9Q7TNL7 452 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Dzip1Q8BMD2 852 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Rhot2Q8JZN7 620 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Samd9lQ69Z37 1561 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Erich4Q3UNU4 136 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Atp7aQ64430 1491 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 L3mbtl2P59178 703 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Rec8Q8C5S7 591 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Frmpd2A0A140LI67 1392 aa8.97□□□□□ -0.97
Usp40-201ENSMUST00000040783 Map3k13Q1HKZ5 959 aa8.96□□□□□ -0.97
Usp40-201ENSMUST00000040783 ArsiQ32KI9 573 aa8.96□□□□□ -0.97
Usp40-201ENSMUST00000040783 RdxP26043 583 aaKnown RBP8.96□□□□□ -0.97
Usp40-201ENSMUST00000040783 Rfx1P48377 963 aa8.96□□□□□ -0.97
Usp40-201ENSMUST00000040783 Phf14Q9D4H9 881 aa8.96□□□□□ -0.97
Usp40-201ENSMUST00000040783 Prex2Q3LAC4 1598 aa8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Cfap99A0A140LIX9 648 aa8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Rabep1O35551 862 aa8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Nkx1-2P42580 305 aa8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Srgap3Q812A2 1099 aa8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Nup160Q9Z0W3 1402 aaKnown RBP8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Tpm3P21107 285 aaKnown RBP8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 KarsQ99MN1 595 aaKnown RBP8.96□□□□□ -0.98
Usp40-201ENSMUST00000040783 Strn4P58404 760 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Naip6Q9JIB6 1403 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ints3Q7TPD0 1041 aaKnown RBP8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Rprd2Q6NXI6 1469 aaKnown RBP8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Hoxb7P09024 217 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Kif3aP28741 701 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Tpm1P58771 284 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Mex3cQ05A36 652 aaKnown RBP8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ripply1Q2WG77 201 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 Naip7Q9JIB3 1402 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 TnnQ80Z71 1560 aa8.95□□□□□ -0.98
Usp40-201ENSMUST00000040783 EappQ5BU09 281 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Bicd2Q921C5 820 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ssr1Q9CY50 286 aaKnown RBP8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Mre11Q61216 706 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Hook1Q8BIL5 728 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ccdc43Q9CR29 222 aaKnown RBP8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Cfap74Q3UY96 1578 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ube2q2Q8K2Z8 378 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Slc12a5Q91V14 1138 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Pik3c2gO70167 1506 aa8.94□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ppp4r3bQ922R5 820 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ripk4Q9ERK0 786 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Znf518aB2RRF6 1478 aaKnown RBP8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Mum1Q6DID5 682 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Cfap69Q8BH53 942 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Riok1Q922Q2 567 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 NpatQ8BMA5 1420 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Ppp2r3aB2RXC8 1150 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 Samd1D3YXK1 519 aa8.93□□□□□ -0.98
Usp40-201ENSMUST00000040783 TbcaP48428 108 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms