RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A NCS6P53088 359 aa9.74□□□□□ -0.85
TGA1tA(UGC)A PEX29Q03370 554 aa9.74□□□□□ -0.85
TGA1tA(UGC)A OSH3P38713 996 aaKnown RBP9.73□□□□□ -0.85
TGA1tA(UGC)A YHL050CP38721 697 aa9.73□□□□□ -0.85
TGA1tA(UGC)A RSC30P38781 883 aa9.73□□□□□ -0.85
TGA1tA(UGC)A IRC8P47046 822 aa9.73□□□□□ -0.85
TGA1tA(UGC)A ASH1P34233 588 aa9.72□□□□□ -0.85
TGA1tA(UGC)A TFA1P36100 482 aa9.72□□□□□ -0.85
TGA1tA(UGC)A KEL3Q08979 651 aaPredicted RBP9.72□□□□□ -0.85
TGA1tA(UGC)A YBL028CP38202 106 aa9.71□□□□□ -0.86
TGA1tA(UGC)A TIF4631P39935 952 aaKnown RBP9.71□□□□□ -0.86
TGA1tA(UGC)A SNU71P53207 620 aaKnown RBP9.71□□□□□ -0.86
TGA1tA(UGC)A BRE1Q07457 700 aaKnown RBP9.71□□□□□ -0.86
TGA1tA(UGC)A YDL124WQ07551 312 aaKnown RBP9.71□□□□□ -0.86
TGA1tA(UGC)A MPH3P0CE00 602 aa9.7□□□□□ -0.86
TGA1tA(UGC)A PBY1P38254 753 aa9.7□□□□□ -0.86
TGA1tA(UGC)A ACA1P39970 489 aa9.7□□□□□ -0.86
TGA1tA(UGC)A YDJ1P25491 409 aaKnown RBP9.69□□□□□ -0.86
TGA1tA(UGC)A KTR1P27810 393 aaKnown RBP9.69□□□□□ -0.86
TGA1tA(UGC)A NET1P47035 1189 aa9.69□□□□□ -0.86
TGA1tA(UGC)A NKP2Q06162 153 aa9.69□□□□□ -0.86
TGA1tA(UGC)A SKG3Q06315 1026 aa9.69□□□□□ -0.86
TGA1tA(UGC)A YPL260WQ08977 551 aa9.69□□□□□ -0.86
TGA1tA(UGC)A TAH18Q12181 623 aa9.69□□□□□ -0.86
TGA1tA(UGC)A COQ1P18900 473 aa9.68□□□□□ -0.86
TGA1tA(UGC)A OPI1P21957 404 aa9.68□□□□□ -0.86
TGA1tA(UGC)A PRE8P23639 250 aa9.68□□□□□ -0.86
TGA1tA(UGC)A OCT1P35999 772 aa9.68□□□□□ -0.86
TGA1tA(UGC)A CST26P38226 397 aa9.68□□□□□ -0.86
TGA1tA(UGC)A RFC1P38630 861 aaKnown RBP9.68□□□□□ -0.86
TGA1tA(UGC)A JIP4Q03361 876 aa9.68□□□□□ -0.86
TGA1tA(UGC)A RMD1Q03441 430 aa9.68□□□□□ -0.86
TGA1tA(UGC)A YLR225CQ05948 407 aaKnown RBP9.68□□□□□ -0.86
TGA1tA(UGC)A SRM1P21827 482 aa9.67□□□□□ -0.86
TGA1tA(UGC)A SPB4P25808 606 aaPredicted RBP9.67□□□□□ -0.86
TGA1tA(UGC)A ERG7P38604 731 aa9.67□□□□□ -0.86
TGA1tA(UGC)A RTS1P38903 757 aa9.67□□□□□ -0.86
TGA1tA(UGC)A SPR3P41901 512 aa9.67□□□□□ -0.86
TGA1tA(UGC)A TUS1Q06412 1307 aa9.66□□□□□ -0.86
TGA1tA(UGC)A CHO2P05374 869 aaKnown RBP9.66□□□□□ -0.86
TGA1tA(UGC)A IXR1P33417 597 aa9.66□□□□□ -0.86
TGA1tA(UGC)A RAD50P12753 1312 aa9.65□□□□□ -0.86
TGA1tA(UGC)A FBP1P09201 348 aa9.65□□□□□ -0.86
TGA1tA(UGC)A RAD61Q99359 647 aa9.65□□□□□ -0.86
TGA1tA(UGC)A SDH2P21801 266 aa9.64□□□□□ -0.87
TGA1tA(UGC)A SPT21P35209 758 aa9.64□□□□□ -0.87
TGA1tA(UGC)A ENP2P48234 707 aaKnown RBP9.64□□□□□ -0.87
TGA1tA(UGC)A ECM16Q04217 1267 aaKnown RBP9.64□□□□□ -0.87
TGA1tA(UGC)A SGD1Q06132 899 aa9.64□□□□□ -0.87
TGA1tA(UGC)A SUB2Q07478 446 aaKnown RBP9.64□□□□□ -0.87
TGA1tA(UGC)A LAP2Q10740 671 aa9.64□□□□□ -0.87
TGA1tA(UGC)A RIM20Q12033 661 aa9.64□□□□□ -0.87
TGA1tA(UGC)A TAO3P40468 2376 aa9.64□□□□□ -0.87
TGA1tA(UGC)A CHS3P29465 1165 aa9.63□□□□□ -0.87
TGA1tA(UGC)A MET1P36150 593 aa9.63□□□□□ -0.87
TGA1tA(UGC)A AAP1P37898 856 aaKnown RBP9.63□□□□□ -0.87
TGA1tA(UGC)A VID27P40157 782 aa9.63□□□□□ -0.87
TGA1tA(UGC)A YJL007CP47080 104 aa9.63□□□□□ -0.87
TGA1tA(UGC)A CFT2Q12102 859 aaPredicted RBP9.63□□□□□ -0.87
TGA1tA(UGC)A KRS1P15180 591 aaKnown RBP9.62□□□□□ -0.87
TGA1tA(UGC)A CDC60P26637 1090 aaKnown RBP9.62□□□□□ -0.87
TGA1tA(UGC)A PRO3P32263 286 aaKnown RBP9.62□□□□□ -0.87
TGA1tA(UGC)A MYO3P36006 1272 aa9.62□□□□□ -0.87
TGA1tA(UGC)A LYS14P40971 790 aa9.62□□□□□ -0.87
TGA1tA(UGC)A PIB1Q06651 286 aa9.62□□□□□ -0.87
TGA1tA(UGC)A UBX5Q06682 500 aa9.62□□□□□ -0.87
TGA1tA(UGC)A DIT2P21595 489 aa9.61□□□□□ -0.87
TGA1tA(UGC)A PER1P25625 357 aa9.61□□□□□ -0.87
TGA1tA(UGC)A STM1P39015 273 aaKnown RBP9.61□□□□□ -0.87
TGA1tA(UGC)A VAB2P40003 282 aa9.61□□□□□ -0.87
TGA1tA(UGC)A YML037CQ03703 340 aa9.61□□□□□ -0.87
TGA1tA(UGC)A ERG12P07277 443 aa9.6□□□□□ -0.87
TGA1tA(UGC)A RPS15Q01855 142 aaKnown RBP9.6□□□□□ -0.87
TGA1tA(UGC)A SKI2P35207 1287 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
TGA1tA(UGC)A MCD4P36051 919 aa9.59□□□□□ -0.87
TGA1tA(UGC)A UFD2P54860 961 aa9.59□□□□□ -0.87
TGA1tA(UGC)A TY3A-GQ12173 290 aa9.59□□□□□ -0.87
TGA1tA(UGC)A TY3A-IQ99219 290 aa9.59□□□□□ -0.87
TGA1tA(UGC)A SLN1P39928 1220 aaPredicted RBP9.58□□□□□ -0.88
TGA1tA(UGC)A MRD1Q06106 887 aaKnown RBP9.58□□□□□ -0.88
TGA1tA(UGC)A SSF2Q12153 453 aaPredicted RBP9.58□□□□□ -0.88
TGA1tA(UGC)A FPR3P38911 411 aaKnown RBP9.57□□□□□ -0.88
TGA1tA(UGC)A RRP8P38961 392 aaKnown RBP9.57□□□□□ -0.88
TGA1tA(UGC)A HDA1P53973 706 aa9.57□□□□□ -0.88
TGA1tA(UGC)A SAM2P19358 384 aaKnown RBP9.56□□□□□ -0.88
TGA1tA(UGC)A ANP1P32629 500 aa9.56□□□□□ -0.88
TGA1tA(UGC)A SOL4P53315 255 aa9.56□□□□□ -0.88
TGA1tA(UGC)A ECM29P38737 1868 aa9.55□□□□□ -0.88
TGA1tA(UGC)A VAS1P07806 1104 aaKnown RBP9.55□□□□□ -0.88
TGA1tA(UGC)A PKC1P24583 1151 aa9.55□□□□□ -0.88
TGA1tA(UGC)A EUG1P32474 517 aa9.55□□□□□ -0.88
TGA1tA(UGC)A PAM1P37304 830 aaKnown RBP9.55□□□□□ -0.88
TGA1tA(UGC)A BRN1P38170 754 aa9.55□□□□□ -0.88
TGA1tA(UGC)A CRG1P38892 291 aaRIP-Chip data9.55□□□□□ -0.88not detected
TGA1tA(UGC)A PES4P39684 611 aa9.55□□□□□ -0.88
TGA1tA(UGC)A VPS8P39702 1274 aa9.55□□□□□ -0.88
TGA1tA(UGC)A PRY3P47033 881 aa9.55□□□□□ -0.88
TGA1tA(UGC)A PTK2P47116 818 aaKnown RBP9.55□□□□□ -0.88
TGA1tA(UGC)A MYO1P08964 1928 aa9.54□□□□□ -0.88
TGA1tA(UGC)A RIT1P23796 513 aa9.54□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms