RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 RAD9P14737 1309 aa4.45□□□□□ -1.7
snR42snR42 BCK1Q01389 1478 aa4.44□□□□□ -1.7
snR42snR42 RAV1P47104 1357 aa4.44□□□□□ -1.7
snR42snR42 CFT1Q06632 1357 aaKnown RBP4.44□□□□□ -1.7
snR42snR42 IRC24P40580 263 aa4.44□□□□□ -1.7
snR42snR42 HDA3Q06623 655 aa4.44□□□□□ -1.7
snR42snR42 RPS31P05759 152 aaKnown RBP4.43□□□□□ -1.7
snR42snR42 RTC1Q08281 1341 aa4.43□□□□□ -1.7
snR42snR42 LEU1P07264 779 aaKnown RBP4.42□□□□□ -1.7
snR42snR42 TPS3P38426 1054 aaKnown RBP4.42□□□□□ -1.7
snR42snR42 SOH1P38633 127 aa4.42□□□□□ -1.7
snR42snR42 ALO1P54783 526 aaKnown RBP4.42□□□□□ -1.7
snR42snR42 HPC2Q01448 625 aa4.42□□□□□ -1.7
snR42snR42 NUP192P47054 1683 aa4.41□□□□□ -1.7
snR42snR42 KIN1P13185 1064 aa4.41□□□□□ -1.7
snR42snR42 OMA1P36163 345 aa4.41□□□□□ -1.7
snR42snR42 TAF5P38129 798 aa4.41□□□□□ -1.7
snR42snR42 MSC7P38694 644 aa4.41□□□□□ -1.7
snR42snR42 INP52P50942 1183 aa4.41□□□□□ -1.7
snR42snR42 ENT1Q12518 454 aa4.41□□□□□ -1.7
snR42snR42 TY3B-IQ7LHG5 1498 aaKnown RBP4.41□□□□□ -1.7
snR42snR42 YDJ1P25491 409 aaKnown RBP4.4□□□□□ -1.71
snR42snR42 ESL2P36168 1195 aa4.4□□□□□ -1.71
snR42snR42 YBL036CP38197 257 aa4.4□□□□□ -1.71
snR42snR42 YPP1P46951 817 aa4.4□□□□□ -1.71
snR42snR42 TAF8Q03750 510 aa4.4□□□□□ -1.71
snR42snR42 YPQ2Q06328 317 aa4.4□□□□□ -1.71
snR42snR42 RCM1P53972 490 aa4.39□□□□□ -1.71
snR42snR42 NHA1Q99271 985 aa4.39□□□□□ -1.71
snR42snR42 LEU3P08638 886 aa4.38□□□□□ -1.71
snR42snR42 RGP1P16664 663 aa4.38□□□□□ -1.71
snR42snR42 PRP45P28004 379 aaPredicted RBP4.38□□□□□ -1.71
snR42snR42 ALD2P47771 506 aa4.38□□□□□ -1.71
snR42snR42 BUD9P53226 547 aa4.38□□□□□ -1.71
snR42snR42 TFB3Q03290 321 aa4.38□□□□□ -1.71
snR42snR42 SWI5P08153 709 aa4.37□□□□□ -1.71
snR42snR42 CPS1P27614 576 aa4.37□□□□□ -1.71
snR42snR42 IMH1Q06704 911 aaKnown RBP4.37□□□□□ -1.71
snR42snR42 MCM1P11746 286 aa4.36□□□□□ -1.71
snR42snR42 PGM2P37012 569 aaKnown RBP4.36□□□□□ -1.71
snR42snR42 ALG14P38242 237 aa4.36□□□□□ -1.71
snR42snR42 YTA6P40328 754 aa4.36□□□□□ -1.71
snR42snR42 ORC1P54784 914 aaPredicted RBP4.36□□□□□ -1.71
snR42snR42 HEH2Q03281 663 aa4.36□□□□□ -1.71
snR42snR42 YMR074CQ04773 145 aa4.36□□□□□ -1.71
snR42snR42 CBC2Q08920 208 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
snR42snR42 PRP5P21372 849 aaPredicted RBP4.35□□□□□ -1.71
snR42snR42 GUA1P38625 525 aaKnown RBP4.35□□□□□ -1.71
snR42snR42 PPH3P32345 308 aa4.34□□□□□ -1.71
snR42snR42 PGM1P33401 570 aaKnown RBP4.34□□□□□ -1.71
snR42snR42 KIP3P53086 805 aaKnown RBP4.34□□□□□ -1.71
snR42snR42 RRP5Q05022 1729 aaKnown RBP4.34□□□□□ -1.71
snR42snR42 YRF1-2P40105 1681 aa4.33□□□□□ -1.72
snR42snR42 AI3P03877 415 aa4.33□□□□□ -1.72
snR42snR42 SPE2P21182 396 aa4.33□□□□□ -1.72
snR42snR42 AIM9P40053 627 aaKnown RBP4.33□□□□□ -1.72
snR42snR42 PRK1P40494 810 aa4.33□□□□□ -1.72
snR42snR42 YNL165WP53891 406 aa4.33□□□□□ -1.72
snR42snR42 CHZ1P40019 153 aaPredicted RBP4.32□□□□□ -1.72
snR42snR42 YFL034WP43564 1073 aa4.32□□□□□ -1.72
snR42snR42 GLT1Q12680 2145 aaKnown RBP4.32□□□□□ -1.72
snR42snR42 TY4B-HP0C2J7 1802 aa4.31□□□□□ -1.72
snR42snR42 TY4B-JP47024 1803 aa4.31□□□□□ -1.72
snR42snR42 NAR1P23503 491 aaKnown RBP4.31□□□□□ -1.72
snR42snR42 UBP1P25037 809 aa4.31□□□□□ -1.72
snR42snR42 ENP1P38333 483 aaKnown RBP4.31□□□□□ -1.72
snR42snR42 BRL1P38770 471 aa4.31□□□□□ -1.72
snR42snR42 AVT1P47082 602 aa4.31□□□□□ -1.72
snR42snR42 GIS4Q04233 774 aa4.31□□□□□ -1.72
snR42snR42 RPS6AP0CX37 236 aaKnown RBP4.3□□□□□ -1.72
snR42snR42 RPS6BP0CX38 236 aaPredicted RBP4.3□□□□□ -1.72
snR42snR42 SUP45P12385 437 aaKnown RBP4.3□□□□□ -1.72
snR42snR42 SAC7P17121 654 aa4.3□□□□□ -1.72
snR42snR42 MLF3P32047 452 aa4.3□□□□□ -1.72
snR42snR42 NAB2P32505 525 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
snR42snR42 SCT1P32784 759 aa4.3□□□□□ -1.72
snR42snR42 YJL181WP46987 611 aa4.3□□□□□ -1.72
snR42snR42 ARI1P53111 347 aaKnown RBP4.3□□□□□ -1.72
snR42snR42 LEU2P04173 364 aaPredicted RBP4.29□□□□□ -1.72
snR42snR42 RPS24AP0CX31 135 aaKnown RBP4.29□□□□□ -1.72
snR42snR42 RPS24BP0CX32 135 aaKnown RBP4.29□□□□□ -1.72
snR42snR42 PSK1P31374 1356 aa4.28□□□□□ -1.72
snR42snR42 ENO2P00925 437 aaKnown RBP4.28□□□□□ -1.72
snR42snR42 BIO2P32451 375 aa4.28□□□□□ -1.72
snR42snR42 SFA1P32771 386 aa4.28□□□□□ -1.72
snR42snR42 NTH2P35172 780 aa4.28□□□□□ -1.72
snR42snR42 NCL1P38205 684 aaKnown RBP4.28□□□□□ -1.72
snR42snR42 RRM3P38766 723 aa4.28□□□□□ -1.72
snR42snR42 RPN11P43588 306 aaKnown RBP4.28□□□□□ -1.72
snR42snR42 MTR4P47047 1073 aaKnown RBP4.28□□□□□ -1.72
snR42snR42 MED7Q08278 222 aa4.28□□□□□ -1.72
snR42snR42 Q0182Q9ZZW1 134 aa4.28□□□□□ -1.72
snR42snR42 RIM21P48565 533 aa4.27□□□□□ -1.73
snR42snR42 SKP1P52286 194 aa4.27□□□□□ -1.73
snR42snR42 GAS5Q08193 484 aa4.27□□□□□ -1.73
snR42snR42 ADE6P38972 1358 aaKnown RBP4.27□□□□□ -1.73
snR42snR42 RDS2P19541 446 aaKnown RBP4.26□□□□□ -1.73
snR42snR42 COQ2P32378 372 aa4.26□□□□□ -1.73
snR42snR42 KAE1P36132 386 aa4.26□□□□□ -1.73
snR42snR42 YKR073CP36153 106 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms