RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W TOM20P35180 183 aa7.87□□□□□ -1.15
DPB2YPR175W TYW3P53177 273 aa7.87□□□□□ -1.15
DPB2YPR175W TY1A-DR3Q12441 440 aa7.87□□□□□ -1.15
DPB2YPR175W CCP1P00431 361 aa7.86□□□□□ -1.15
DPB2YPR175W TDA5Q06417 326 aaKnown RBP7.86□□□□□ -1.15
DPB2YPR175W CHL1P22516 861 aaPredicted RBP7.85□□□□□ -1.15
DPB2YPR175W ADI1Q03677 179 aa7.85□□□□□ -1.15
DPB2YPR175W JJJ2P46997 583 aa7.85□□□□□ -1.15
DPB2YPR175W POB3Q04636 552 aaKnown RBP7.85□□□□□ -1.15
DPB2YPR175W YOR131CQ12486 218 aa7.85□□□□□ -1.15
DPB2YPR175W HEM13P11353 328 aaKnown RBP7.84□□□□□ -1.15
DPB2YPR175W MON1P53129 644 aa7.84□□□□□ -1.15
DPB2YPR175W MET6P05694 767 aaKnown RBP7.83□□□□□ -1.16
DPB2YPR175W MRF1P30775 413 aaPredicted RBP7.83□□□□□ -1.16
DPB2YPR175W NUT1P53114 1132 aa7.83□□□□□ -1.16
DPB2YPR175W KAP122P32767 1081 aa7.83□□□□□ -1.16
DPB2YPR175W GIP1P38229 639 aa7.83□□□□□ -1.16
DPB2YPR175W TIM54P47045 478 aa7.83□□□□□ -1.16
DPB2YPR175W ERR1P0CX10 437 aa7.82□□□□□ -1.16
DPB2YPR175W ERR2P0CX11 437 aa7.82□□□□□ -1.16
DPB2YPR175W SLA1P32790 1244 aa7.82□□□□□ -1.16
DPB2YPR175W FIR1P40020 876 aa7.82□□□□□ -1.16
DPB2YPR175W RTS3P53289 263 aa7.82□□□□□ -1.16
DPB2YPR175W NAN1Q02931 896 aaKnown RBP7.82□□□□□ -1.16
DPB2YPR175W MSH6Q03834 1242 aa7.82□□□□□ -1.16
DPB2YPR175W YOR296WQ08748 1289 aa7.82□□□□□ -1.16
DPB2YPR175W ISW1P38144 1129 aa7.82□□□□□ -1.16
DPB2YPR175W DLD3P39976 496 aaKnown RBP7.82□□□□□ -1.16
DPB2YPR175W NUG1P40010 520 aaKnown RBP7.82□□□□□ -1.16
DPB2YPR175W ESC2Q06340 456 aa7.82□□□□□ -1.16
DPB2YPR175W FLC1Q08967 793 aa7.82□□□□□ -1.16
DPB2YPR175W MET32Q12041 191 aa7.82□□□□□ -1.16
DPB2YPR175W RPP2BP02400 110 aaKnown RBP7.81□□□□□ -1.16
DPB2YPR175W YJR115WP47152 169 aa7.81□□□□□ -1.16
DPB2YPR175W CLA4P48562 842 aa7.81□□□□□ -1.16
DPB2YPR175W RTT10Q08924 1013 aa7.81□□□□□ -1.16
DPB2YPR175W HXT13P39924 564 aa7.8□□□□□ -1.16
DPB2YPR175W RSP5P39940 809 aaKnown RBP7.8□□□□□ -1.16
DPB2YPR175W HXT17P53631 564 aa7.8□□□□□ -1.16
DPB2YPR175W HXT15P54854 567 aa7.8□□□□□ -1.16
DPB2YPR175W SSB1P11484 613 aaKnown RBP7.8□□□□□ -1.16
DPB2YPR175W PYC2P32327 1180 aaKnown RBP7.8□□□□□ -1.16
DPB2YPR175W UBP12P39538 1254 aa7.8□□□□□ -1.16
DPB2YPR175W SSB2P40150 613 aaKnown RBP7.8□□□□□ -1.16
DPB2YPR175W SAP155P43612 1002 aa7.8□□□□□ -1.16
DPB2YPR175W PHO8P11491 566 aa7.79□□□□□ -1.16
DPB2YPR175W MSN5P52918 1224 aa7.79□□□□□ -1.16
DPB2YPR175W SEA4P38164 1038 aa7.79□□□□□ -1.16
DPB2YPR175W YBR184WP38299 523 aa7.79□□□□□ -1.16
DPB2YPR175W ALA1P40825 983 aaKnown RBP7.79□□□□□ -1.16
DPB2YPR175W PSH1Q12161 406 aa7.79□□□□□ -1.16
DPB2YPR175W PFD1P46988 109 aa7.78□□□□□ -1.16
DPB2YPR175W ITC1P53125 1264 aa7.78□□□□□ -1.16
DPB2YPR175W FAL1Q12099 399 aaKnown RBP7.78□□□□□ -1.16
DPB2YPR175W BAS1P22035 811 aa7.77□□□□□ -1.17
DPB2YPR175W XKS1P42826 600 aa7.77□□□□□ -1.17
DPB2YPR175W DNM1P54861 757 aa7.77□□□□□ -1.17
DPB2YPR175W HED1Q03937 162 aa7.77□□□□□ -1.17
DPB2YPR175W PUF4P25339 888 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
DPB2YPR175W IRE1P32361 1115 aa7.77□□□□□ -1.17
DPB2YPR175W AIM46P38885 310 aa7.77□□□□□ -1.17
DPB2YPR175W YIL165CP40446 119 aa7.77□□□□□ -1.17
DPB2YPR175W BMT6Q12291 365 aa7.77□□□□□ -1.17
DPB2YPR175W KAR2P16474 682 aaKnown RBP7.76□□□□□ -1.17
DPB2YPR175W PDC6P26263 563 aaKnown RBP7.76□□□□□ -1.17
DPB2YPR175W CUS1Q02554 436 aaPredicted RBP7.76□□□□□ -1.17
DPB2YPR175W HDA2Q06629 674 aa7.76□□□□□ -1.17
DPB2YPR175W YGR161W-CQ3E744 92 aa7.76□□□□□ -1.17
DPB2YPR175W SWE1P32944 819 aa7.75□□□□□ -1.17
DPB2YPR175W RIM11P38615 370 aa7.75□□□□□ -1.17
DPB2YPR175W CHZ1P40019 153 aaPredicted RBP7.75□□□□□ -1.17
DPB2YPR175W MRL1Q06815 381 aa7.75□□□□□ -1.17
DPB2YPR175W REC8Q12188 680 aa7.75□□□□□ -1.17
DPB2YPR175W RPL8BP29453 256 aaKnown RBP7.75□□□□□ -1.17
DPB2YPR175W SKP1P52286 194 aa7.75□□□□□ -1.17
DPB2YPR175W KRE33P53914 1056 aaKnown RBP7.75□□□□□ -1.17
DPB2YPR175W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
DPB2YPR175W CAN1P04817 590 aa7.74□□□□□ -1.17
DPB2YPR175W LEU1P07264 779 aaKnown RBP7.74□□□□□ -1.17
DPB2YPR175W RVS167P39743 482 aaKnown RBP7.74□□□□□ -1.17
DPB2YPR175W YNR040WP53736 256 aa7.74□□□□□ -1.17
DPB2YPR175W CMR1Q12510 522 aaKnown RBP7.74□□□□□ -1.17
DPB2YPR175W YGL140CP53120 1219 aa7.74□□□□□ -1.17
DPB2YPR175W YLR125WQ12138 136 aa7.74□□□□□ -1.17
DPB2YPR175W TRP2P00899 507 aaKnown RBP7.73□□□□□ -1.17
DPB2YPR175W ABD1P32783 436 aaPredicted RBP7.73□□□□□ -1.17
DPB2YPR175W SEC23P15303 768 aaKnown RBP7.72□□□□□ -1.17
DPB2YPR175W AAD14P42884 376 aa7.72□□□□□ -1.17
DPB2YPR175W ZDS1P50111 915 aaKnown RBP7.72□□□□□ -1.17
DPB2YPR175W YGR125WP53273 1036 aa7.72□□□□□ -1.17
DPB2YPR175W FMP25Q08023 583 aa7.72□□□□□ -1.17
DPB2YPR175W RER2P35196 286 aa7.72□□□□□ -1.17
DPB2YPR175W RTA1P53047 317 aa7.72□□□□□ -1.17
DPB2YPR175W NOG1Q02892 647 aaKnown RBP7.72□□□□□ -1.17
DPB2YPR175W PRP5P21372 849 aaPredicted RBP7.71□□□□□ -1.17
DPB2YPR175W AGP1P25376 633 aa7.71□□□□□ -1.17
DPB2YPR175W RDH54P38086 958 aa7.71□□□□□ -1.17
DPB2YPR175W ENP1P38333 483 aaKnown RBP7.71□□□□□ -1.17
DPB2YPR175W PEX28P38848 579 aa7.71□□□□□ -1.17
DPB2YPR175W YEN1P40028 759 aa7.71□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms