RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	YJR120W	P47157	116 aa		4.27	□□□□□ -1.73
APL4	YPR029C	SAM37	P50110	327 aa		4.27	□□□□□ -1.73
APL4	YPR029C	VTC3	Q02725	835 aa		4.27	□□□□□ -1.73
APL4	YPR029C	UTP13	Q05946	817 aa	Known RBP	4.27	□□□□□ -1.73
APL4	YPR029C	TDA5	Q06417	326 aa	Known RBP	4.27	□□□□□ -1.73
APL4	YPR029C	CDC45	Q08032	650 aa		4.27	□□□□□ -1.73
APL4	YPR029C	YOL087C	Q99247	1116 aa		4.27	□□□□□ -1.73
APL4	YPR029C	VMA8	P32610	256 aa	Known RBP	4.26	□□□□□ -1.73
APL4	YPR029C	MOT2	P34909	587 aa	Known RBP	4.26	□□□□□ -1.73
APL4	YPR029C	PIP2	P52960	996 aa		4.26	□□□□□ -1.73
APL4	YPR029C	PIL1	P53252	339 aa	Known RBP	4.26	□□□□□ -1.73
APL4	YPR029C	YOL036W	Q08206	761 aa		4.26	□□□□□ -1.73
APL4	YPR029C	MED1	Q12321	566 aa		4.26	□□□□□ -1.73
APL4	YPR029C	NOP4	P37838	685 aa	Known RBP	4.26	□□□□□ -1.73
APL4	YPR029C	TBS1	P38114	1094 aa		4.26	□□□□□ -1.73
APL4	YPR029C	EXO84	P38261	753 aa		4.26	□□□□□ -1.73
APL4	YPR029C	FUN12	P39730	1002 aa	Known RBP	4.26	□□□□□ -1.73
APL4	YPR029C	TMA108	P40462	946 aa		4.26	□□□□□ -1.73
APL4	YPR029C	MNT3	P40549	630 aa		4.26	□□□□□ -1.73
APL4	YPR029C	UBA2	P52488	636 aa		4.26	□□□□□ -1.73
APL4	YPR029C	FPK1	P53739	893 aa		4.26	□□□□□ -1.73
APL4	YPR029C	SPN1	Q06505	410 aa	Predicted RBP	4.26	□□□□□ -1.73
APL4	YPR029C	REH1	Q06709	432 aa		4.26	□□□□□ -1.73
APL4	YPR029C	RDS2	P19541	446 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	APN1	P22936	367 aa		4.25	□□□□□ -1.73
APL4	YPR029C	UBP1	P25037	809 aa		4.25	□□□□□ -1.73
APL4	YPR029C	GCD6	P32501	712 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	IME2	P32581	645 aa		4.25	□□□□□ -1.73
APL4	YPR029C	ECM32	P32644	1121 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	GGA2	P38817	585 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	RPS26A	P39938	119 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	RPS26B	P39939	119 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	YMR111C	Q04461	462 aa	Predicted RBP	4.25	□□□□□ -1.73
APL4	YPR029C	PUN1	Q06991	263 aa		4.25	□□□□□ -1.73
APL4	YPR029C	FLC1	Q08967	793 aa		4.25	□□□□□ -1.73
APL4	YPR029C	TSR3	Q12094	313 aa	Known RBP	4.25	□□□□□ -1.73
APL4	YPR029C	NUP145	P49687	1317 aa		4.25	□□□□□ -1.73
APL4	YPR029C	PHO4	P07270	312 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	RED1	P14291	827 aa		4.24	□□□□□ -1.73
APL4	YPR029C	SUI2	P20459	304 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	CHS3	P29465	1165 aa		4.24	□□□□□ -1.73
APL4	YPR029C	IMP2'	P32351	346 aa		4.24	□□□□□ -1.73
APL4	YPR029C	RIM4	P38741	713 aa		4.24	□□□□□ -1.73
APL4	YPR029C	POP2	P39008	433 aa		4.24	□□□□□ -1.73
APL4	YPR029C	YNR063W	P53749	607 aa		4.24	□□□□□ -1.73
APL4	YPR029C	ALO1	P54783	526 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	YML131W	Q03102	365 aa		4.24	□□□□□ -1.73
APL4	YPR029C	NTG2	Q08214	380 aa		4.24	□□□□□ -1.73
APL4	YPR029C	MPD2	Q99316	277 aa		4.24	□□□□□ -1.73
APL4	YPR029C	NIP100	P33420	868 aa		4.24	□□□□□ -1.73
APL4	YPR029C	CCT3	P39077	534 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	RSP5	P39940	809 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	MAM1	P40065	302 aa		4.24	□□□□□ -1.73
APL4	YPR029C	SPR3	P41901	512 aa		4.24	□□□□□ -1.73
APL4	YPR029C	YGR122W	P53272	402 aa		4.24	□□□□□ -1.73
APL4	YPR029C	PAP2	P53632	584 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	CWC21	Q03375	135 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	SPO71	Q03868	1245 aa		4.24	□□□□□ -1.73
APL4	YPR029C	ATG13	Q06628	738 aa		4.24	□□□□□ -1.73
APL4	YPR029C	NEW1	Q08972	1196 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	RRP6	Q12149	733 aa	Known RBP	4.24	□□□□□ -1.73
APL4	YPR029C	SRF1	Q12516	437 aa		4.24	□□□□□ -1.73
APL4	YPR029C	PHO87	P25360	923 aa		4.23	□□□□□ -1.73
APL4	YPR029C	YJU3	P28321	313 aa		4.23	□□□□□ -1.73
APL4	YPR029C	YHR020W	P38708	688 aa	Known RBP	4.23	□□□□□ -1.73
APL4	YPR029C	HAL5	P38970	855 aa	Known RBP	4.23	□□□□□ -1.73
APL4	YPR029C	PEX14	P53112	341 aa		4.23	□□□□□ -1.73
APL4	YPR029C	TYW3	P53177	273 aa		4.23	□□□□□ -1.73
APL4	YPR029C	NIS1	P53939	407 aa		4.23	□□□□□ -1.73
APL4	YPR029C	SAS4	Q04003	481 aa		4.23	□□□□□ -1.73
APL4	YPR029C	YLH47	Q06493	454 aa		4.23	□□□□□ -1.73
APL4	YPR029C	INO80	P53115	1489 aa		4.23	□□□□□ -1.73
APL4	YPR029C	TRP5	P00931	707 aa	Known RBP	4.23	□□□□□ -1.73
APL4	YPR029C	RGP1	P16664	663 aa		4.23	□□□□□ -1.73
APL4	YPR029C	PGS1	P25578	521 aa		4.23	□□□□□ -1.73
APL4	YPR029C	PTP2	P29461	750 aa		4.23	□□□□□ -1.73
APL4	YPR029C	PIM1	P36775	1133 aa		4.23	□□□□□ -1.73
APL4	YPR029C	SPF1	P39986	1215 aa	Known RBP	4.23	□□□□□ -1.73
APL4	YPR029C	SUM1	P46676	1062 aa		4.23	□□□□□ -1.73
APL4	YPR029C	SGM1	P47166	707 aa		4.23	□□□□□ -1.73
APL4	YPR029C	OCA1	P50946	238 aa	Predicted RBP	4.23	□□□□□ -1.73
APL4	YPR029C	NAF1	P53919	492 aa	Known RBP	4.23	□□□□□ -1.73
APL4	YPR029C	TGL2	P54857	326 aa		4.23	□□□□□ -1.73
APL4	YPR029C	MET14	Q02196	202 aa		4.23	□□□□□ -1.73
APL4	YPR029C	ERR1	P0CX10	437 aa		4.22	□□□□□ -1.73
APL4	YPR029C	ERR2	P0CX11	437 aa		4.22	□□□□□ -1.73
APL4	YPR029C	RAD54	P32863	898 aa		4.22	□□□□□ -1.73
APL4	YPR029C	PTC3	P34221	468 aa	Known RBP	4.22	□□□□□ -1.73
APL4	YPR029C	YBR071W	P38243	211 aa		4.22	□□□□□ -1.73
APL4	YPR029C	RRF1	P38771	230 aa		4.22	□□□□□ -1.73
APL4	YPR029C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	RIP-Chip
APL4	YPR029C	BNI4	P53858	892 aa		4.22	□□□□□ -1.73
APL4	YPR029C	COG6	P53959	839 aa		4.22	□□□□□ -1.73
APL4	YPR029C	TRS120	Q04183	1289 aa		4.22	□□□□□ -1.73
APL4	YPR029C	YDR286C	Q05530	114 aa		4.22	□□□□□ -1.73
APL4	YPR029C	OPY2	Q06810	360 aa		4.22	□□□□□ -1.73
APL4	YPR029C	PGC1	Q08959	321 aa		4.22	□□□□□ -1.73
APL4	YPR029C	CYT1	P07143	309 aa		4.22	□□□□□ -1.73
APL4	YPR029C	CMP2	P14747	604 aa		4.22	□□□□□ -1.73
APL4	YPR029C	CYC8	P14922	966 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms