RNA–Protein interactions for RNA: YPL226W

NEW1, Transcript of ATP binding cassette protein, yeast

Gene NEW1, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEW1	YPL226W	SUP35	P05453	685 aa	Known RBP	3.18	□□□□□ -1.9
NEW1	YPL226W	PDR1	P12383	1068 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	ORC6	P38826	435 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	SPL2	P38839	148 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	MPP10	P47083	593 aa	Known RBP	3.18	□□□□□ -1.9
NEW1	YPL226W	THI3	Q07471	609 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	PSH1	Q12161	406 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	MRP7	P12687	371 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	APE3	P37302	537 aa	Known RBP	3.18	□□□□□ -1.9
NEW1	YPL226W	YRR1	Q12172	810 aa		3.18	□□□□□ -1.9
NEW1	YPL226W	SAC3	P46674	1301 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	PBS2	P08018	668 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	EBP2	P36049	427 aa	Known RBP	3.17	□□□□□ -1.9
NEW1	YPL226W	SRT1	Q03175	343 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	SRC1	Q03707	834 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	TOM1	Q03280	3268 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	GAL2	P13181	574 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	TPD3	P31383	635 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	MOT2	P34909	587 aa	Known RBP	3.17	□□□□□ -1.9
NEW1	YPL226W	PSF3	Q12146	194 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	NUG1	P40010	520 aa	Known RBP	3.17	□□□□□ -1.9
NEW1	YPL226W	MTC5	Q03897	1148 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	RBA50	Q04418	439 aa		3.17	□□□□□ -1.9
NEW1	YPL226W	ACK1	Q07622	623 aa	Predicted RBP	3.17	□□□□□ -1.9
NEW1	YPL226W	ARG82	P07250	355 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	NIT1	P40447	199 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	JJJ2	P46997	583 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	IRC4	Q03036	179 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	LCB1	P25045	558 aa	Known RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	UTP7	P40055	554 aa	Known RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	MTC3	P53077	123 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	HEF3	P53978	1044 aa	Known RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	TOS4	Q06266	489 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	YDL144C	Q07589	356 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	NOP8	Q08287	484 aa	Predicted RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	SNU66	Q12420	587 aa	Predicted RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	FLO11	P08640	1367 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	GSC2	P40989	1895 aa		3.16	□□□□□ -1.9
NEW1	YPL226W	RPS7A	P26786	190 aa	Known RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	WRS1	Q12109	432 aa	Known RBP	3.16	□□□□□ -1.9
NEW1	YPL226W	NPL4	P33755	580 aa		3.15	□□□□□ -1.9
NEW1	YPL226W	NUD1	P32336	851 aa		3.15	□□□□□ -1.91
NEW1	YPL226W	UBP12	P39538	1254 aa		3.15	□□□□□ -1.91
NEW1	YPL226W	MVP1	P40959	511 aa	Known RBP	3.15	□□□□□ -1.91
NEW1	YPL226W	MAM3	Q12296	706 aa		3.15	□□□□□ -1.91
NEW1	YPL226W	MRF1	P30775	413 aa	Predicted RBP	3.14	□□□□□ -1.91
NEW1	YPL226W	PAM1	P37304	830 aa	Known RBP	3.14	□□□□□ -1.91
NEW1	YPL226W	ASH1	P34233	588 aa		3.14	□□□□□ -1.91
NEW1	YPL226W	SPR3	P41901	512 aa		3.14	□□□□□ -1.91
NEW1	YPL226W	PUS6	P53294	404 aa		3.14	□□□□□ -1.91
NEW1	YPL226W	SGD1	Q06132	899 aa		3.14	□□□□□ -1.91
NEW1	YPL226W	GIN4	Q12263	1142 aa		3.14	□□□□□ -1.91
NEW1	YPL226W	PRT1	P06103	763 aa	Known RBP	3.13	□□□□□ -1.91
NEW1	YPL226W	TPS3	P38426	1054 aa	Known RBP	3.13	□□□□□ -1.91
NEW1	YPL226W	YFH7	P43591	353 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	YGR122W	P53272	402 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	SWC3	P31376	625 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	YLR225C	Q05948	407 aa	Known RBP	3.13	□□□□□ -1.91
NEW1	YPL226W	YEL077C	Q3E7X8	1277 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	ADR1	P07248	1323 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	RGR1	P19263	1082 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	PSE1	P32337	1089 aa	Known RBP	3.13	□□□□□ -1.91
NEW1	YPL226W	RAD24	P32641	659 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	DSF2	P38213	736 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	STR2	P47164	639 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	YPR109W	Q06104	294 aa		3.13	□□□□□ -1.91
NEW1	YPL226W	BUD20	Q08004	166 aa	Predicted RBP	3.13	□□□□□ -1.91
NEW1	YPL226W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
NEW1	YPL226W	AMS1	P22855	1083 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	HXT10	P43581	546 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	YPP1	P46951	817 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	ISM1	P48526	1002 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	APL6	P46682	809 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	PPM2	Q08282	695 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	RAD53	P22216	821 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	CLB5	P30283	435 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	RPT3	P33298	428 aa	Known RBP	3.12	□□□□□ -1.91
NEW1	YPL226W	KEL1	P38853	1164 aa	Known RBP	3.12	□□□□□ -1.91
NEW1	YPL226W	BOI2	P39969	1040 aa		3.12	□□□□□ -1.91
NEW1	YPL226W	PMA1	P05030	918 aa	Known RBP	3.11	□□□□□ -1.91
NEW1	YPL226W	SPB4	P25808	606 aa	Predicted RBP	3.11	□□□□□ -1.91
NEW1	YPL226W	RPP0	P05317	312 aa	Known RBP	3.11	□□□□□ -1.91
NEW1	YPL226W	ADP1	P25371	1049 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	PAH1	P32567	862 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	NET1	P47035	1189 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	RAS1	P01119	309 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	SUI2	P20459	304 aa	Known RBP	3.11	□□□□□ -1.91
NEW1	YPL226W	GCD11	P32481	527 aa	Known RBP	3.11	□□□□□ -1.91
NEW1	YPL226W	ERG7	P38604	731 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	RRI2	Q12348	645 aa		3.11	□□□□□ -1.91
NEW1	YPL226W	SEC18	P18759	758 aa	Known RBP	3.1	□□□□□ -1.91
NEW1	YPL226W	OCT1	P35999	772 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	PTK1	P36002	662 aa	Predicted RBP	3.1	□□□□□ -1.91
NEW1	YPL226W	MAL31	P38156	614 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	PSF2	P40359	213 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	ULP1	Q02724	621 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	CSI1	Q04368	295 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	DUR1,2	P32528	1835 aa	Known RBP	3.1	□□□□□ -1.91
NEW1	YPL226W	ERG12	P07277	443 aa		3.1	□□□□□ -1.91
NEW1	YPL226W	MDL2	P33311	773 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 92.2 ms