RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeastyeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOS3YPL116W PMS1P14242 873 aa4.5□□□□□ -1.69
HOS3YPL116W TPM1P17536 199 aaKnown RBP4.5□□□□□ -1.69
HOS3YPL116W TRX2P22803 104 aaKnown RBP4.5□□□□□ -1.69
HOS3YPL116W APD1P38281 316 aa4.5□□□□□ -1.69
HOS3YPL116W RTT106P40161 455 aa4.5□□□□□ -1.69
HOS3YPL116W YIR014WP40570 242 aa4.5□□□□□ -1.69
HOS3YPL116W SPR3P41901 512 aa4.5□□□□□ -1.69
HOS3YPL116W SET2P46995 733 aaKnown RBP4.5□□□□□ -1.69
HOS3YPL116W CWH41P53008 833 aa4.5□□□□□ -1.69
HOS3YPL116W RTF1P53064 558 aa4.5□□□□□ -1.69
HOS3YPL116W RPN4Q03465 531 aa4.5□□□□□ -1.69
HOS3YPL116W VMS1Q04311 632 aaKnown RBP4.5□□□□□ -1.69
HOS3YPL116W NNT1Q05874 261 aa4.5□□□□□ -1.69
HOS3YPL116W SUB2Q07478 446 aaKnown RBP4.5□□□□□ -1.69
HOS3YPL116W RRP36Q12481 300 aaPredicted RBP4.5□□□□□ -1.69
HOS3YPL116W TUF1P02992 437 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W KRR1P25586 316 aaPredicted RBP4.49□□□□□ -1.69
HOS3YPL116W SEC8P32855 1065 aa4.49□□□□□ -1.69
HOS3YPL116W APL2P36000 726 aaPredicted RBP4.49□□□□□ -1.69
HOS3YPL116W TCD1P38756 429 aa4.49□□□□□ -1.69
HOS3YPL116W BFR1P38934 470 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
HOS3YPL116W LSC1P53598 329 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69 RIP-Chip
HOS3YPL116W YMR102CQ03177 834 aa4.49□□□□□ -1.69
HOS3YPL116W UBX2Q04228 584 aa4.49□□□□□ -1.69
HOS3YPL116W ATG38Q05789 226 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W DPH6Q12429 685 aa4.49□□□□□ -1.69
HOS3YPL116W MAK11P20484 414 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W CDC48P25694 835 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W KNS1P32350 737 aaPredicted RBP4.49□□□□□ -1.69
HOS3YPL116W STM1P39015 273 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W FMP10P40098 244 aa4.49□□□□□ -1.69
HOS3YPL116W RIO2P40160 425 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W EFM5P53200 248 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W NOP15P53927 220 aaPredicted RBP4.49□□□□□ -1.69
HOS3YPL116W ECM11Q04110 302 aa4.49□□□□□ -1.69
HOS3YPL116W UTP13Q05946 817 aaKnown RBP4.49□□□□□ -1.69
HOS3YPL116W FOB1O13329 566 aa4.48□□□□□ -1.69
HOS3YPL116W THS1P04801 734 aaKnown RBP4.48□□□□□ -1.69
HOS3YPL116W AAD3P25612 363 aa4.48□□□□□ -1.69
HOS3YPL116W RRP1P35178 278 aaPredicted RBP4.48□□□□□ -1.69
HOS3YPL116W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
HOS3YPL116W GTT3P39996 337 aa4.48□□□□□ -1.69
HOS3YPL116W SRB7P47822 140 aa4.48□□□□□ -1.69
HOS3YPL116W YGL140CP53120 1219 aa4.48□□□□□ -1.69
HOS3YPL116W FMP30Q02883 468 aa4.48□□□□□ -1.69
HOS3YPL116W RAD33Q04231 177 aa4.48□□□□□ -1.69
HOS3YPL116W SWA2Q06677 668 aa4.48□□□□□ -1.69
HOS3YPL116W YIG1Q08956 461 aa4.48□□□□□ -1.69
HOS3YPL116W ENT1Q12518 454 aa4.48□□□□□ -1.69
HOS3YPL116W BUD4P47136 1447 aa4.48□□□□□ -1.69
HOS3YPL116W REV3P14284 1504 aa4.47□□□□□ -1.69
HOS3YPL116W PRT1P06103 763 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W SEC14P24280 304 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W PLC1P32383 869 aa4.47□□□□□ -1.69
HOS3YPL116W PTR2P32901 601 aa4.47□□□□□ -1.69
HOS3YPL116W CSE1P33307 960 aa4.47□□□□□ -1.69
HOS3YPL116W MNR2P35724 969 aa4.47□□□□□ -1.69
HOS3YPL116W UIP5P36137 443 aa4.47□□□□□ -1.69
HOS3YPL116W GRX7P38068 203 aa4.47□□□□□ -1.69
HOS3YPL116W TAF5P38129 798 aa4.47□□□□□ -1.69
HOS3YPL116W APE4P38821 490 aa4.47□□□□□ -1.69
HOS3YPL116W PEX18P38855 283 aa4.47□□□□□ -1.69
HOS3YPL116W RTS1P38903 757 aa4.47□□□□□ -1.69
HOS3YPL116W DOT6P40059 670 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W MAD1P40957 749 aa4.47□□□□□ -1.69
HOS3YPL116W GCD10P41814 478 aa4.47□□□□□ -1.69
HOS3YPL116W YFR006WP43590 535 aa4.47□□□□□ -1.69
HOS3YPL116W GCD14P46959 383 aaPredicted RBP4.47□□□□□ -1.69
HOS3YPL116W NNF1P47149 201 aa4.47□□□□□ -1.69
HOS3YPL116W DCP2P53550 970 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W CWC21Q03375 135 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W GIC2Q06648 383 aa4.47□□□□□ -1.69
HOS3YPL116W RKM1Q08961 583 aaPredicted RBP4.47□□□□□ -1.69
HOS3YPL116W GNT1Q12096 491 aa4.47□□□□□ -1.69
HOS3YPL116W RTC5Q12108 567 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W RAD9P14737 1309 aa4.47□□□□□ -1.69
HOS3YPL116W NUP145P49687 1317 aa4.47□□□□□ -1.69
HOS3YPL116W NUP120P35729 1037 aa4.47□□□□□ -1.69
HOS3YPL116W VPS24P36095 224 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W UBP14P38237 781 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W SLX1P38324 304 aa4.47□□□□□ -1.69
HOS3YPL116W GLO3P38682 493 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W SAP1P39955 897 aaKnown RBP4.47□□□□□ -1.69
HOS3YPL116W ACF4P47129 309 aa4.47□□□□□ -1.69
HOS3YPL116W YGR016WP53209 190 aa4.47□□□□□ -1.69
HOS3YPL116W ZDS2P54786 942 aa4.47□□□□□ -1.69
HOS3YPL116W MDM36Q06820 579 aa4.47□□□□□ -1.69
HOS3YPL116W PEP1P32319 1579 aa4.46□□□□□ -1.7
HOS3YPL116W TEF1P02994 458 aaKnown RBP4.46□□□□□ -1.7
HOS3YPL116W BUD2P33314 1104 aa4.46□□□□□ -1.7
HOS3YPL116W MRPL40P36534 297 aa4.46□□□□□ -1.7
HOS3YPL116W OSH3P38713 996 aaKnown RBP4.46□□□□□ -1.7
HOS3YPL116W IML2P47031 731 aa4.46□□□□□ -1.7
HOS3YPL116W YNL035CP53962 389 aaKnown RBP4.46□□□□□ -1.7
HOS3YPL116W MRS2Q01926 470 aa4.46□□□□□ -1.7
HOS3YPL116W INP2Q03824 705 aa4.46□□□□□ -1.7
HOS3YPL116W YPL277CQ08989 487 aa4.46□□□□□ -1.7
HOS3YPL116W MDS3P53094 1487 aa4.46□□□□□ -1.7
HOS3YPL116W KIP2P28743 706 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms