RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W YHL008CP38750 627 aa4.53□□□□□ -1.68
SRL1YOR247W VAC8P39968 578 aa4.53□□□□□ -1.68
SRL1YOR247W MRPS18P42847 217 aa4.53□□□□□ -1.68
SRL1YOR247W RGD2P43556 714 aa4.53□□□□□ -1.68
SRL1YOR247W MTO1P53070 669 aa4.53□□□□□ -1.68
SRL1YOR247W CWC24P53769 259 aa4.53□□□□□ -1.68
SRL1YOR247W KRE33P53914 1056 aaKnown RBP4.53□□□□□ -1.68
SRL1YOR247W VPS16Q03308 798 aa4.53□□□□□ -1.68
SRL1YOR247W YCS4Q06156 1176 aa4.53□□□□□ -1.68
SRL1YOR247W INP54Q08227 384 aaKnown RBP4.53□□□□□ -1.68
SRL1YOR247W MCD1Q12158 566 aa4.53□□□□□ -1.68
SRL1YOR247W YOL098CQ12496 1037 aa4.53□□□□□ -1.68
SRL1YOR247W LEU1P07264 779 aaKnown RBP4.52□□□□□ -1.69
SRL1YOR247W RAD2P07276 1031 aa4.52□□□□□ -1.69
SRL1YOR247W JJJ3P47138 172 aa4.52□□□□□ -1.69
SRL1YOR247W ALD6P54115 500 aaKnown RBP4.52□□□□□ -1.69
SRL1YOR247W DAL4Q04895 635 aa4.52□□□□□ -1.69
SRL1YOR247W YOR296WQ08748 1289 aa4.52□□□□□ -1.69
SRL1YOR247W TIF6Q12522 245 aaKnown RBP4.52□□□□□ -1.69
SRL1YOR247W RPS31P05759 152 aaKnown RBP4.51□□□□□ -1.69
SRL1YOR247W PRE9P23638 258 aaKnown RBP4.51□□□□□ -1.69
SRL1YOR247W FPS1P23900 669 aa4.51□□□□□ -1.69
SRL1YOR247W MRPL16P38064 232 aa4.51□□□□□ -1.69
SRL1YOR247W AIM46P38885 310 aa4.51□□□□□ -1.69
SRL1YOR247W YJL049WP47048 450 aa4.51□□□□□ -1.69
SRL1YOR247W ADE12P80210 433 aaKnown RBP4.51□□□□□ -1.69
SRL1YOR247W FLP1P03870 423 aa4.5□□□□□ -1.69
SRL1YOR247W HXK1P04806 485 aaKnown RBP4.5□□□□□ -1.69
SRL1YOR247W RPC31P17890 251 aa4.5□□□□□ -1.69
SRL1YOR247W SRP40P32583 406 aaPredicted RBP4.5□□□□□ -1.69
SRL1YOR247W BRN1P38170 754 aa4.5□□□□□ -1.69
SRL1YOR247W OSW7P43611 510 aa4.5□□□□□ -1.69
SRL1YOR247W ALD3P54114 506 aa4.5□□□□□ -1.69
SRL1YOR247W SYT1Q06836 1226 aa4.5□□□□□ -1.69
SRL1YOR247W RGP1P16664 663 aa4.49□□□□□ -1.69
SRL1YOR247W PRP40P33203 583 aaKnown RBP4.49□□□□□ -1.69
SRL1YOR247W NMD2P38798 1089 aaKnown RBP4.49□□□□□ -1.69
SRL1YOR247W BSD2P38356 321 aa4.48□□□□□ -1.69
SRL1YOR247W RVS167P39743 482 aaKnown RBP4.48□□□□□ -1.69
SRL1YOR247W CUS1Q02554 436 aaPredicted RBP4.48□□□□□ -1.69
SRL1YOR247W APM2P38700 605 aa4.47□□□□□ -1.69
SRL1YOR247W FAA3P39002 694 aa4.47□□□□□ -1.69
SRL1YOR247W SKP1P52286 194 aa4.47□□□□□ -1.69
SRL1YOR247W YAF9P53930 226 aa4.47□□□□□ -1.69
SRL1YOR247W DOS2P54858 310 aa4.47□□□□□ -1.69
SRL1YOR247W EMG1Q06287 252 aaKnown RBP4.47□□□□□ -1.69
SRL1YOR247W YKL091CP33324 310 aaKnown RBP4.46□□□□□ -1.7
SRL1YOR247W NCL1P38205 684 aaKnown RBP4.46□□□□□ -1.7
SRL1YOR247W YIL165CP40446 119 aa4.46□□□□□ -1.7
SRL1YOR247W NUT1P53114 1132 aa4.46□□□□□ -1.7
SRL1YOR247W YPL109CQ02981 657 aa4.46□□□□□ -1.7
SRL1YOR247W HEH2Q03281 663 aa4.46□□□□□ -1.7
SRL1YOR247W ADI1Q03677 179 aa4.46□□□□□ -1.7
SRL1YOR247W TOS4Q06266 489 aa4.46□□□□□ -1.7
SRL1YOR247W PMT7Q06644 662 aa4.46□□□□□ -1.7
SRL1YOR247W SSF2Q12153 453 aaPredicted RBP4.46□□□□□ -1.7
SRL1YOR247W YOR131CQ12486 218 aa4.46□□□□□ -1.7
SRL1YOR247W AI1P03875 834 aa4.45□□□□□ -1.7
SRL1YOR247W CDC34P14682 295 aa4.45□□□□□ -1.7
SRL1YOR247W STI1P15705 589 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SRL1YOR247W SQT1P35184 431 aa4.45□□□□□ -1.7
SRL1YOR247W KRI1P42846 591 aaKnown RBP4.45□□□□□ -1.7
SRL1YOR247W MON1P53129 644 aa4.45□□□□□ -1.7
SRL1YOR247W ULP1Q02724 621 aa4.45□□□□□ -1.7
SRL1YOR247W GDE1Q02979 1223 aa4.45□□□□□ -1.7
SRL1YOR247W MSH6Q03834 1242 aa4.45□□□□□ -1.7
SRL1YOR247W RSC2Q06488 889 aa4.45□□□□□ -1.7
SRL1YOR247W TMA46Q12000 345 aaKnown RBP4.45□□□□□ -1.7
SRL1YOR247W RAD27P26793 382 aa4.44□□□□□ -1.7
SRL1YOR247W MCM5P29496 775 aaKnown RBP4.44□□□□□ -1.7
SRL1YOR247W PYC2P32327 1180 aaKnown RBP4.44□□□□□ -1.7
SRL1YOR247W NAB2P32505 525 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SRL1YOR247W PPG1P32838 368 aa4.44□□□□□ -1.7
SRL1YOR247W RNH70P53331 553 aa4.44□□□□□ -1.7
SRL1YOR247W CTR9P89105 1077 aa4.44□□□□□ -1.7
SRL1YOR247W NSE3Q05541 303 aa4.44□□□□□ -1.7
SRL1YOR247W SHU2P38957 223 aa4.43□□□□□ -1.7
SRL1YOR247W RSM26P47141 266 aa4.43□□□□□ -1.7
SRL1YOR247W ITC1P53125 1264 aa4.43□□□□□ -1.7
SRL1YOR247W RTT10Q08924 1013 aa4.43□□□□□ -1.7
SRL1YOR247W CDC53Q12018 815 aaKnown RBP4.43□□□□□ -1.7
SRL1YOR247W PHM7Q12252 991 aa4.43□□□□□ -1.7
SRL1YOR247W GPM1P00950 247 aaKnown RBP4.42□□□□□ -1.7
SRL1YOR247W TAF13P11747 167 aa4.42□□□□□ -1.7
SRL1YOR247W KNS1P32350 737 aaPredicted RBP4.42□□□□□ -1.7
SRL1YOR247W SPC42P36094 363 aa4.42□□□□□ -1.7
SRL1YOR247W SAP155P43612 1002 aa4.42□□□□□ -1.7
SRL1YOR247W YGR053CP53234 283 aa4.42□□□□□ -1.7
SRL1YOR247W TY1A-DR2Q03964 440 aaKnown RBP4.42□□□□□ -1.7
SRL1YOR247W RGA2Q06407 1009 aa4.42□□□□□ -1.7
SRL1YOR247W GRX1P25373 110 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W UGA4P32837 571 aa4.41□□□□□ -1.7
SRL1YOR247W RRP14P36080 434 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W ICP55P40051 511 aa4.41□□□□□ -1.7
SRL1YOR247W YER156CP40093 338 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W IOC3P43596 787 aa4.41□□□□□ -1.7
SRL1YOR247W FAA4P47912 694 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W RPN4Q03465 531 aa4.41□□□□□ -1.7
SRL1YOR247W TDA5Q06417 326 aaKnown RBP4.41□□□□□ -1.7
SRL1YOR247W MRL1Q06815 381 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms