RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWT1	YOR166C	PUP1	P25043	261 aa		4.66	□□□□□ -1.66
SWT1	YOR166C	POL5	P39985	1022 aa	Known RBP	4.66	□□□□□ -1.66
SWT1	YOR166C	NCE103	P53615	221 aa		4.66	□□□□□ -1.66
SWT1	YOR166C	SEA4	P38164	1038 aa		4.65	□□□□□ -1.66
SWT1	YOR166C	CYC7	P00045	113 aa		4.65	□□□□□ -1.67
SWT1	YOR166C	LEM3	P42838	414 aa		4.65	□□□□□ -1.67
SWT1	YOR166C	PUF6	Q04373	656 aa	Known RBP	4.65	□□□□□ -1.67
SWT1	YOR166C	RGD2	P43556	714 aa		4.64	□□□□□ -1.67
SWT1	YOR166C	HVG1	P0CE11	249 aa		4.63	□□□□□ -1.67
SWT1	YOR166C	FUS1	P11710	512 aa		4.63	□□□□□ -1.67
SWT1	YOR166C	MSB1	P21339	1137 aa	Known RBP	4.63	□□□□□ -1.67
SWT1	YOR166C	SRS2	P12954	1174 aa		4.62	□□□□□ -1.67
SWT1	YOR166C	CPS1	P27614	576 aa		4.62	□□□□□ -1.67
SWT1	YOR166C	HXT8	P40886	569 aa		4.62	□□□□□ -1.67
SWT1	YOR166C	CWC15	Q03772	175 aa	Known RBP	4.62	□□□□□ -1.67
SWT1	YOR166C	PUN1	Q06991	263 aa		4.62	□□□□□ -1.67
SWT1	YOR166C	APC11	Q12157	165 aa		4.62	□□□□□ -1.67
SWT1	YOR166C	MAE1	P36013	669 aa	Known RBP	4.61	□□□□□ -1.67
SWT1	YOR166C	BOI1	P38041	980 aa	Known RBP	4.61	□□□□□ -1.67
SWT1	YOR166C	AIM46	P38885	310 aa		4.61	□□□□□ -1.67
SWT1	YOR166C	SPO71	Q03868	1245 aa		4.6	□□□□□ -1.67
SWT1	YOR166C	ELG1	Q12050	791 aa		4.6	□□□□□ -1.67
SWT1	YOR166C	ERS1	P17261	260 aa		4.59	□□□□□ -1.67
SWT1	YOR166C	NTA1	P40354	457 aa		4.59	□□□□□ -1.67
SWT1	YOR166C	YNR065C	P53751	1116 aa		4.59	□□□□□ -1.67
SWT1	YOR166C	RNQ1	P25367	405 aa		4.58	□□□□□ -1.68
SWT1	YOR166C	YBR287W	P38355	427 aa		4.58	□□□□□ -1.68
SWT1	YOR166C	UBP5	P39944	805 aa		4.58	□□□□□ -1.68
SWT1	YOR166C	HAS1	Q03532	505 aa	Known RBP	4.58	□□□□□ -1.68
SWT1	YOR166C	GLO4	Q12320	285 aa		4.58	□□□□□ -1.68
SWT1	YOR166C	LRG1	P35688	1017 aa		4.57	□□□□□ -1.68
SWT1	YOR166C	FIR1	P40020	876 aa		4.57	□□□□□ -1.68
SWT1	YOR166C	YJR124C	P47159	448 aa		4.57	□□□□□ -1.68
SWT1	YOR166C	SDH1	Q00711	640 aa		4.57	□□□□□ -1.68
SWT1	YOR166C	GCD1	P09032	578 aa	Predicted RBP	4.56	□□□□□ -1.68
SWT1	YOR166C	SEG2	P34250	1132 aa		4.56	□□□□□ -1.68
SWT1	YOR166C	KIP3	P53086	805 aa	Known RBP	4.56	□□□□□ -1.68
SWT1	YOR166C	YML083C	Q04526	418 aa		4.56	□□□□□ -1.68
SWT1	YOR166C	TIF6	Q12522	245 aa	Known RBP	4.56	□□□□□ -1.68
SWT1	YOR166C	LEO1	P38439	464 aa		4.55	□□□□□ -1.68
SWT1	YOR166C	GIC2	Q06648	383 aa		4.55	□□□□□ -1.68
SWT1	YOR166C	RPB10	P22139	70 aa		4.54	□□□□□ -1.68
SWT1	YOR166C	NEO1	P40527	1151 aa		4.54	□□□□□ -1.68
SWT1	YOR166C	PNP1	Q05788	311 aa		4.54	□□□□□ -1.68
SWT1	YOR166C	NOB1	Q08444	459 aa	Known RBP	4.54	□□□□□ -1.68
SWT1	YOR166C	LSO1	Q3E827	93 aa		4.54	□□□□□ -1.68
SWT1	YOR166C	PSY2	P40164	858 aa		4.53	□□□□□ -1.68
SWT1	YOR166C	SUT1	P53032	299 aa	Known RBP	4.53	□□□□□ -1.68
SWT1	YOR166C	DMA2	P53924	522 aa		4.53	□□□□□ -1.68
SWT1	YOR166C	PYC2	P32327	1180 aa	Known RBP	4.53	□□□□□ -1.69
SWT1	YOR166C	IRS4	P36115	615 aa	Known RBP	4.53	□□□□□ -1.69
SWT1	YOR166C	RAD55	P38953	406 aa		4.53	□□□□□ -1.69
SWT1	YOR166C	NIT1	P40447	199 aa		4.53	□□□□□ -1.69
SWT1	YOR166C	ECL1	P48235	211 aa		4.52	□□□□□ -1.69
SWT1	YOR166C	DFG16	Q99234	619 aa		4.52	□□□□□ -1.69
SWT1	YOR166C	POL12	P38121	705 aa	Predicted RBP	4.51	□□□□□ -1.69
SWT1	YOR166C	CTR9	P89105	1077 aa		4.51	□□□□□ -1.69
SWT1	YOR166C	YOR223W	Q12015	292 aa		4.51	□□□□□ -1.69
SWT1	YOR166C	YCR015C	P25616	317 aa		4.5	□□□□□ -1.69
SWT1	YOR166C	RRN6	P32786	894 aa		4.5	□□□□□ -1.69
SWT1	YOR166C	SMC1	P32908	1225 aa		4.5	□□□□□ -1.69
SWT1	YOR166C	FET4	P40988	552 aa		4.5	□□□□□ -1.69
SWT1	YOR166C	FAR11	P53917	953 aa		4.5	□□□□□ -1.69
SWT1	YOR166C	TSA1	P34760	196 aa	Known RBP	4.49	□□□□□ -1.69
SWT1	YOR166C	WHI3	P34761	661 aa	Known RBP	4.49	□□□□□ -1.69
SWT1	YOR166C	GPT2	P36148	743 aa		4.49	□□□□□ -1.69
SWT1	YOR166C	MMM1	P41800	426 aa		4.49	□□□□□ -1.69
SWT1	YOR166C	COB	P00163	385 aa		4.48	□□□□□ -1.69
SWT1	YOR166C	YHL008C	P38750	627 aa		4.48	□□□□□ -1.69
SWT1	YOR166C	BOL3	P39724	118 aa		4.48	□□□□□ -1.69
SWT1	YOR166C	CIT3	P43635	486 aa		4.48	□□□□□ -1.69
SWT1	YOR166C	CDA2	Q06703	312 aa		4.48	□□□□□ -1.69
SWT1	YOR166C	RIM11	P38615	370 aa		4.47	□□□□□ -1.69
SWT1	YOR166C	OYE3	P41816	400 aa	Predicted RBP	4.47	□□□□□ -1.69
SWT1	YOR166C	PRP5	P21372	849 aa	Predicted RBP	4.46	□□□□□ -1.7
SWT1	YOR166C	DUR3	P33413	735 aa		4.46	□□□□□ -1.7
SWT1	YOR166C	SSA4	P22202	642 aa	Known RBP	4.45	□□□□□ -1.7
SWT1	YOR166C	GCV1	P48015	400 aa		4.45	□□□□□ -1.7
SWT1	YOR166C	RCM1	P53972	490 aa		4.45	□□□□□ -1.7
SWT1	YOR166C	DOT1	Q04089	582 aa	Known RBP	4.45	□□□□□ -1.7
SWT1	YOR166C	YIG1	Q08956	461 aa		4.45	□□□□□ -1.7
SWT1	YOR166C	CMR1	Q12510	522 aa	Known RBP	4.45	□□□□□ -1.7
SWT1	YOR166C	GAS1	P22146	559 aa	Known RBP	4.44	□□□□□ -1.7
SWT1	YOR166C	HSP78	P33416	811 aa		4.44	□□□□□ -1.7
SWT1	YOR166C	THI80	P35202	319 aa		4.44	□□□□□ -1.7
SWT1	YOR166C	TAF1	P46677	1066 aa		4.44	□□□□□ -1.7
SWT1	YOR166C	ORC3	P54790	616 aa		4.44	□□□□□ -1.7
SWT1	YOR166C	ESC8	Q08119	714 aa		4.44	□□□□□ -1.7
SWT1	YOR166C	YOR059C	Q08448	450 aa	Known RBP	4.44	□□□□□ -1.7
SWT1	YOR166C	NPR1	P22211	790 aa		4.43	□□□□□ -1.7
SWT1	YOR166C	RSC4	Q02206	625 aa		4.43	□□□□□ -1.7
SWT1	YOR166C	YMR074C	Q04773	145 aa		4.43	□□□□□ -1.7
SWT1	YOR166C	HTS1	P07263	546 aa	Known RBP	4.42	□□□□□ -1.7
SWT1	YOR166C	ALT1	P52893	592 aa		4.42	□□□□□ -1.7
SWT1	YOR166C	PRP43	P53131	767 aa	Known RBP	4.42	□□□□□ -1.7
SWT1	YOR166C	EAR1	Q03212	550 aa		4.42	□□□□□ -1.7
SWT1	YOR166C	MEC3	Q02574	474 aa		4.41	□□□□□ -1.7
SWT1	YOR166C	YLL054C	Q12244	843 aa		4.41	□□□□□ -1.7
SWT1	YOR166C	NSI1	Q12457	570 aa		4.41	□□□□□ -1.7
SWT1	YOR166C	FUR4	P05316	633 aa	Known RBP	4.4	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms