RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W GPI13Q07830 1017 aa5.37□□□□□ -1.55
VPS17YOR132W NOP8Q08287 484 aaPredicted RBP5.37□□□□□ -1.55
VPS17YOR132W SAM37P50110 327 aa5.37□□□□□ -1.55
VPS17YOR132W BIO5P53744 561 aaKnown RBP5.37□□□□□ -1.55
VPS17YOR132W TDA6Q06466 467 aa5.37□□□□□ -1.55
VPS17YOR132W MCX1P38323 520 aaPredicted RBP5.36□□□□□ -1.55
VPS17YOR132W GUP1P53154 560 aa5.36□□□□□ -1.55
VPS17YOR132W ALD3P54114 506 aa5.36□□□□□ -1.55
VPS17YOR132W SOG2Q08817 791 aa5.36□□□□□ -1.55
VPS17YOR132W YHL008CP38750 627 aa5.35□□□□□ -1.55
VPS17YOR132W IPL1P38991 367 aa5.35□□□□□ -1.55
VPS17YOR132W GIP2P40036 548 aa5.35□□□□□ -1.55
VPS17YOR132W LEM3P42838 414 aa5.35□□□□□ -1.55
VPS17YOR132W THI12P42883 340 aa5.35□□□□□ -1.55
VPS17YOR132W THI5P43534 340 aa5.35□□□□□ -1.55
VPS17YOR132W THI11P47183 340 aa5.35□□□□□ -1.55
VPS17YOR132W SOK2P53438 785 aaPredicted RBP5.35□□□□□ -1.55
VPS17YOR132W CTR9P89105 1077 aa5.35□□□□□ -1.55
VPS17YOR132W THI13Q07748 340 aa5.35□□□□□ -1.55
VPS17YOR132W NOC3Q07896 663 aaPredicted RBP5.35□□□□□ -1.55
VPS17YOR132W PUS1Q12211 544 aaKnown RBP5.35□□□□□ -1.55
VPS17YOR132W TFA2P36145 328 aa5.34□□□□□ -1.56
VPS17YOR132W YMR187CQ03236 431 aa5.34□□□□□ -1.56
VPS17YOR132W GLO4Q12320 285 aa5.34□□□□□ -1.56
VPS17YOR132W FLP1P03870 423 aa5.33□□□□□ -1.56
VPS17YOR132W GCD6P32501 712 aaKnown RBP5.33□□□□□ -1.56
VPS17YOR132W CIC1P38779 376 aaKnown RBP5.33□□□□□ -1.56
VPS17YOR132W YJR124CP47159 448 aa5.33□□□□□ -1.56
VPS17YOR132W MTC5Q03897 1148 aa5.33□□□□□ -1.56
VPS17YOR132W INP54Q08227 384 aaKnown RBP5.33□□□□□ -1.56
VPS17YOR132W WHI5Q12416 295 aa5.33□□□□□ -1.56
VPS17YOR132W YPR053CQ6Q5F3 151 aa5.33□□□□□ -1.56
VPS17YOR132W MET4P32389 672 aa5.32□□□□□ -1.56
VPS17YOR132W TED1P40533 473 aa5.32□□□□□ -1.56
VPS17YOR132W TY4B-PA0A0B7P3V8 1104 aa5.31□□□□□ -1.56
VPS17YOR132W COBP00163 385 aa5.31□□□□□ -1.56
VPS17YOR132W HVG1P0CE11 249 aa5.31□□□□□ -1.56
VPS17YOR132W VPS35P34110 944 aa5.31□□□□□ -1.56
VPS17YOR132W AMN1P38285 549 aaPredicted RBP5.31□□□□□ -1.56
VPS17YOR132W YNR065CP53751 1116 aa5.31□□□□□ -1.56
VPS17YOR132W MSH6Q03834 1242 aa5.31□□□□□ -1.56
VPS17YOR132W TY4A-HQ6Q5P6 413 aa5.31□□□□□ -1.56
VPS17YOR132W PHO4P07270 312 aaKnown RBP5.31□□□□□ -1.56
VPS17YOR132W HEM3P28789 327 aa5.31□□□□□ -1.56
VPS17YOR132W RRM3P38766 723 aa5.31□□□□□ -1.56
VPS17YOR132W NEO1P40527 1151 aa5.31□□□□□ -1.56
VPS17YOR132W SAC7P17121 654 aa5.3□□□□□ -1.56
VPS17YOR132W PAN5P38787 379 aa5.3□□□□□ -1.56
VPS17YOR132W FET4P40988 552 aa5.3□□□□□ -1.56
VPS17YOR132W LSB6P42951 607 aa5.3□□□□□ -1.56
VPS17YOR132W NUT1P53114 1132 aa5.3□□□□□ -1.56
VPS17YOR132W SPO71Q03868 1245 aa5.3□□□□□ -1.56
VPS17YOR132W NPR1P22211 790 aa5.29□□□□□ -1.56
VPS17YOR132W DUR3P33413 735 aa5.29□□□□□ -1.56
VPS17YOR132W RIM11P38615 370 aa5.29□□□□□ -1.56
VPS17YOR132W SKN7P38889 622 aa5.29□□□□□ -1.56
VPS17YOR132W BUD9P53226 547 aa5.29□□□□□ -1.56
VPS17YOR132W DSE4P53753 1117 aa5.29□□□□□ -1.56
VPS17YOR132W YCS4Q06156 1176 aa5.29□□□□□ -1.56
VPS17YOR132W PMT7Q06644 662 aa5.29□□□□□ -1.56
VPS17YOR132W YDR215CQ12240 137 aa5.29□□□□□ -1.56
VPS17YOR132W RVS167P39743 482 aaKnown RBP5.28□□□□□ -1.56
VPS17YOR132W HAS1Q03532 505 aaKnown RBP5.28□□□□□ -1.56
VPS17YOR132W OXR1Q08952 273 aa5.28□□□□□ -1.56
VPS17YOR132W CMR1Q12510 522 aaKnown RBP5.28□□□□□ -1.56
VPS17YOR132W PRP5P21372 849 aaPredicted RBP5.28□□□□□ -1.56
VPS17YOR132W YCK2P23292 546 aaKnown RBP5.28□□□□□ -1.56
VPS17YOR132W DAK2P43550 591 aa5.28□□□□□ -1.56
VPS17YOR132W SAP155P43612 1002 aa5.28□□□□□ -1.56
VPS17YOR132W SFA1P32771 386 aa5.27□□□□□ -1.57
VPS17YOR132W TAT1P38085 619 aa5.27□□□□□ -1.57
VPS17YOR132W SLN1P39928 1220 aaPredicted RBP5.27□□□□□ -1.57
VPS17YOR132W POL5P39985 1022 aaKnown RBP5.27□□□□□ -1.57
VPS17YOR132W PRY1P47032 299 aa5.27□□□□□ -1.57
VPS17YOR132W MCM5P29496 775 aaKnown RBP5.26□□□□□ -1.57
VPS17YOR132W MON1P53129 644 aa5.26□□□□□ -1.57
VPS17YOR132W AI3P03877 415 aa5.25□□□□□ -1.57
VPS17YOR132W KAR2P16474 682 aaKnown RBP5.25□□□□□ -1.57
VPS17YOR132W MAE1P36013 669 aaKnown RBP5.25□□□□□ -1.57
VPS17YOR132W MGE1P38523 228 aa5.25□□□□□ -1.57
VPS17YOR132W POL32P47110 350 aa5.25□□□□□ -1.57
VPS17YOR132W YAF9P53930 226 aa5.25□□□□□ -1.57
VPS17YOR132W GAS5Q08193 484 aa5.25□□□□□ -1.57
VPS17YOR132W HTS1P07263 546 aaKnown RBP5.24□□□□□ -1.57
VPS17YOR132W RPT1P33299 467 aaKnown RBP5.24□□□□□ -1.57
VPS17YOR132W DAL4Q04895 635 aa5.24□□□□□ -1.57
VPS17YOR132W ELG1Q12050 791 aa5.24□□□□□ -1.57
VPS17YOR132W SGS1P35187 1447 aa5.24□□□□□ -1.57
VPS17YOR132W RSC6P25632 483 aa5.24□□□□□ -1.57
VPS17YOR132W ASF1P32447 279 aa5.24□□□□□ -1.57
VPS17YOR132W PRP40P33203 583 aaKnown RBP5.24□□□□□ -1.57
VPS17YOR132W FAR11P53917 953 aa5.24□□□□□ -1.57
VPS17YOR132W TY1A-NL1Q12391 440 aaKnown RBP5.24□□□□□ -1.57
VPS17YOR132W SHU2P38957 223 aa5.23□□□□□ -1.57
VPS17YOR132W LSB3P43603 459 aaKnown RBP5.23□□□□□ -1.57
VPS17YOR132W CCT8P47079 568 aaKnown RBP5.23□□□□□ -1.57
VPS17YOR132W ARI1P53111 347 aaKnown RBP5.23□□□□□ -1.57
VPS17YOR132W YIG1Q08956 461 aa5.23□□□□□ -1.57
VPS17YOR132W YLL054CQ12244 843 aa5.23□□□□□ -1.57
VPS17YOR132W GCV1P48015 400 aa5.21□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms