RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeast

Gene RRP40, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP40	YOL142W	PGM2	P37012	569 aa	Known RBP	7.86	□□□□□ -1.15
RRP40	YOL142W	ALG14	P38242	237 aa		7.86	□□□□□ -1.15
RRP40	YOL142W	INP51	P40559	946 aa	Known RBP	7.86	□□□□□ -1.15
RRP40	YOL142W	SEC20	P28791	383 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	IPL1	P38991	367 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	BOI2	P39969	1040 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	ALD3	P54114	506 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	CTR9	P89105	1077 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	BSC2	Q05611	235 aa		7.85	□□□□□ -1.15
RRP40	YOL142W	SPA2	P23201	1466 aa	Known RBP	7.84	□□□□□ -1.15
RRP40	YOL142W	FUS1	P11710	512 aa		7.84	□□□□□ -1.15
RRP40	YOL142W	WHI5	Q12416	295 aa		7.84	□□□□□ -1.15
RRP40	YOL142W	BIO5	P53744	561 aa	Known RBP	7.83	□□□□□ -1.16
RRP40	YOL142W	TDA6	Q06466	467 aa		7.83	□□□□□ -1.16
RRP40	YOL142W	NHA1	Q99271	985 aa		7.83	□□□□□ -1.16
RRP40	YOL142W	COB	P00163	385 aa		7.82	□□□□□ -1.16
RRP40	YOL142W	TFA2	P36145	328 aa		7.82	□□□□□ -1.16
RRP40	YOL142W	PHM7	Q12252	991 aa		7.82	□□□□□ -1.16
RRP40	YOL142W	ICP55	P40051	511 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	THI12	P42883	340 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	THI5	P43534	340 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	THI11	P47183	340 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	SOK2	P53438	785 aa	Predicted RBP	7.81	□□□□□ -1.16
RRP40	YOL142W	THI13	Q07748	340 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	SOG2	Q08817	791 aa		7.81	□□□□□ -1.16
RRP40	YOL142W	MET4	P32389	672 aa		7.8	□□□□□ -1.16
RRP40	YOL142W	MCX1	P38323	520 aa	Predicted RBP	7.8	□□□□□ -1.16
RRP40	YOL142W	SLP1	Q12232	587 aa		7.8	□□□□□ -1.16
RRP40	YOL142W	FLP1	P03870	423 aa		7.79	□□□□□ -1.16
RRP40	YOL142W	YHL008C	P38750	627 aa		7.79	□□□□□ -1.16
RRP40	YOL142W	SAM37	P50110	327 aa		7.79	□□□□□ -1.16
RRP40	YOL142W	GLO4	Q12320	285 aa		7.79	□□□□□ -1.16
RRP40	YOL142W	SSN2	P38931	1420 aa		7.78	□□□□□ -1.16
RRP40	YOL142W	ECM2	P38241	364 aa	Known RBP	7.78	□□□□□ -1.16
RRP40	YOL142W	AMN1	P38285	549 aa	Predicted RBP	7.78	□□□□□ -1.16
RRP40	YOL142W	GIP2	P40036	548 aa		7.78	□□□□□ -1.16
RRP40	YOL142W	TED1	P40533	473 aa		7.78	□□□□□ -1.16
RRP40	YOL142W	NOC3	Q07896	663 aa	Predicted RBP	7.78	□□□□□ -1.16
RRP40	YOL142W	INP54	Q08227	384 aa	Known RBP	7.78	□□□□□ -1.16
RRP40	YOL142W	PHO4	P07270	312 aa	Known RBP	7.77	□□□□□ -1.17
RRP40	YOL142W	HVG1	P0CE11	249 aa		7.77	□□□□□ -1.17
RRP40	YOL142W	DUR3	P33413	735 aa		7.77	□□□□□ -1.17
RRP40	YOL142W	YJR124C	P47159	448 aa		7.77	□□□□□ -1.17
RRP40	YOL142W	GUP1	P53154	560 aa		7.77	□□□□□ -1.17
RRP40	YOL142W	YNR065C	P53751	1116 aa		7.76	□□□□□ -1.17
RRP40	YOL142W	MSH6	Q03834	1242 aa		7.76	□□□□□ -1.17
RRP40	YOL142W	CIC1	P38779	376 aa	Known RBP	7.75	□□□□□ -1.17
RRP40	YOL142W	PUS1	Q12211	544 aa	Known RBP	7.75	□□□□□ -1.17
RRP40	YOL142W	YPR053C	Q6Q5F3	151 aa		7.75	□□□□□ -1.17
RRP40	YOL142W	TY4B-P	A0A0B7P3V8	1104 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	GCD6	P32501	712 aa	Known RBP	7.74	□□□□□ -1.17
RRP40	YOL142W	RIM11	P38615	370 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	LEM3	P42838	414 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	LSB6	P42951	607 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	YMR187C	Q03236	431 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	TY4A-H	Q6Q5P6	413 aa		7.74	□□□□□ -1.17
RRP40	YOL142W	THO2	P53552	1597 aa	Known RBP	7.73	□□□□□ -1.17
RRP40	YOL142W	VPS35	P34110	944 aa		7.73	□□□□□ -1.17
RRP40	YOL142W	RRM3	P38766	723 aa		7.73	□□□□□ -1.17
RRP40	YOL142W	PAN5	P38787	379 aa		7.73	□□□□□ -1.17
RRP40	YOL142W	CMR1	Q12510	522 aa	Known RBP	7.73	□□□□□ -1.17
RRP40	YOL142W	NEO1	P40527	1151 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	FET4	P40988	552 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	DAK2	P43550	591 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	NUT1	P53114	1132 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	RGA2	Q06407	1009 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	YDR215C	Q12240	137 aa		7.72	□□□□□ -1.17
RRP40	YOL142W	NPR1	P22211	790 aa		7.71	□□□□□ -1.18
RRP40	YOL142W	YCK2	P23292	546 aa	Known RBP	7.71	□□□□□ -1.18
RRP40	YOL142W	HEM3	P28789	327 aa		7.71	□□□□□ -1.18
RRP40	YOL142W	BUD9	P53226	547 aa		7.71	□□□□□ -1.18
RRP40	YOL142W	HAS1	Q03532	505 aa	Known RBP	7.71	□□□□□ -1.18
RRP40	YOL142W	XRN1	P22147	1528 aa	Known RBP	7.71	□□□□□ -1.18
RRP40	YOL142W	SLN1	P39928	1220 aa	Predicted RBP	7.7	□□□□□ -1.18
RRP40	YOL142W	SAP155	P43612	1002 aa		7.7	□□□□□ -1.18
RRP40	YOL142W	PRY1	P47032	299 aa		7.7	□□□□□ -1.18
RRP40	YOL142W	MON1	P53129	644 aa		7.7	□□□□□ -1.18
RRP40	YOL142W	YCS4	Q06156	1176 aa		7.7	□□□□□ -1.18
RRP40	YOL142W	SAC7	P17121	654 aa		7.69	□□□□□ -1.18
RRP40	YOL142W	PRP5	P21372	849 aa	Predicted RBP	7.69	□□□□□ -1.18
RRP40	YOL142W	SKN7	P38889	622 aa		7.69	□□□□□ -1.18
RRP40	YOL142W	SPO71	Q03868	1245 aa		7.69	□□□□□ -1.18
RRP40	YOL142W	PMT7	Q06644	662 aa		7.69	□□□□□ -1.18
RRP40	YOL142W	GAS5	Q08193	484 aa		7.69	□□□□□ -1.18
RRP40	YOL142W	POL5	P39985	1022 aa	Known RBP	7.68	□□□□□ -1.18
RRP40	YOL142W	POL32	P47110	350 aa		7.68	□□□□□ -1.18
RRP40	YOL142W	RPT1	P33299	467 aa	Known RBP	7.67	□□□□□ -1.18
RRP40	YOL142W	RVS167	P39743	482 aa	Known RBP	7.67	□□□□□ -1.18
RRP40	YOL142W	DSE4	P53753	1117 aa		7.67	□□□□□ -1.18
RRP40	YOL142W	YAF9	P53930	226 aa		7.67	□□□□□ -1.18
RRP40	YOL142W	ATE1	P16639	503 aa		7.66	□□□□□ -1.18
RRP40	YOL142W	MCM5	P29496	775 aa	Known RBP	7.66	□□□□□ -1.18
RRP40	YOL142W	TOS4	Q06266	489 aa		7.66	□□□□□ -1.18
RRP40	YOL142W	AI3	P03877	415 aa		7.65	□□□□□ -1.18
RRP40	YOL142W	SFA1	P32771	386 aa		7.65	□□□□□ -1.18
RRP40	YOL142W	PRP40	P33203	583 aa	Known RBP	7.65	□□□□□ -1.18
RRP40	YOL142W	DAL4	Q04895	635 aa		7.65	□□□□□ -1.18
RRP40	YOL142W	RRP15	Q06511	250 aa	Predicted RBP	7.65	□□□□□ -1.18
RRP40	YOL142W	OXR1	Q08952	273 aa		7.65	□□□□□ -1.18
RRP40	YOL142W	ELG1	Q12050	791 aa		7.65	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms