RNA–Protein interactions for RNA: YOL067C

RTG1, Transcript of Transcription factor (bHLH) involved in interorganelle communication, yeast

Gene RTG1, Length 534 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG1	YOL067C	KEL3	Q08979	651 aa	Predicted RBP	13.72	□□□□□ -0.21
RTG1	YOL067C	CYB2	P00175	591 aa		13.71	□□□□□ -0.21
RTG1	YOL067C	KRS1	P15180	591 aa	Known RBP	13.71	□□□□□ -0.21
RTG1	YOL067C	TFA1	P36100	482 aa		13.71	□□□□□ -0.21
RTG1	YOL067C	HGH1	P48362	394 aa	Known RBP	13.71	□□□□□ -0.21
RTG1	YOL067C	ATG1	P53104	897 aa		13.71	□□□□□ -0.21
RTG1	YOL067C	NCB2	Q92317	146 aa		13.71	□□□□□ -0.21
RTG1	YOL067C	CDC60	P26637	1090 aa	Known RBP	13.7	□□□□□ -0.22
RTG1	YOL067C	LYS14	P40971	790 aa		13.7	□□□□□ -0.22
RTG1	YOL067C	YJL007C	P47080	104 aa		13.7	□□□□□ -0.22
RTG1	YOL067C	RAD2	P07276	1031 aa		13.69	□□□□□ -0.22
RTG1	YOL067C	YGL242C	P53066	181 aa		13.69	□□□□□ -0.22
RTG1	YOL067C	MSH4	P40965	878 aa	Predicted RBP	13.68	□□□□□ -0.22
RTG1	YOL067C	LAP2	Q10740	671 aa		13.68	□□□□□ -0.22
RTG1	YOL067C	SRS2	P12954	1174 aa		13.67	□□□□□ -0.22
RTG1	YOL067C	YKR023W	P36119	530 aa	Known RBP	13.67	□□□□□ -0.22
RTG1	YOL067C	VAB2	P40003	282 aa		13.67	□□□□□ -0.22
RTG1	YOL067C	YMR147W	P40218	223 aa	Known RBP	13.67	□□□□□ -0.22
RTG1	YOL067C	YRB30	P53107	440 aa	Predicted RBP	13.67	□□□□□ -0.22
RTG1	YOL067C	PUF6	Q04373	656 aa	Known RBP	13.67	□□□□□ -0.22
RTG1	YOL067C	CST26	P38226	397 aa		13.66	□□□□□ -0.22
RTG1	YOL067C	BDP1	P46678	594 aa		13.66	□□□□□ -0.22
RTG1	YOL067C	ALO1	P54783	526 aa	Known RBP	13.66	□□□□□ -0.22
RTG1	YOL067C	SNU71	P53207	620 aa	Known RBP	13.65	□□□□□ -0.22
RTG1	YOL067C	VPS62	P53285	467 aa		13.65	□□□□□ -0.22
RTG1	YOL067C	TY3A-G	Q12173	290 aa		13.65	□□□□□ -0.22
RTG1	YOL067C	TY3A-I	Q99219	290 aa		13.65	□□□□□ -0.22
RTG1	YOL067C	EPS1	P40557	701 aa		13.64	□□□□□ -0.23
RTG1	YOL067C	TAO3	P40468	2376 aa		13.63	□□□□□ -0.23
RTG1	YOL067C	NOT3	P06102	836 aa	Known RBP	13.63	□□□□□ -0.23
RTG1	YOL067C	TIF4631	P39935	952 aa	Known RBP	13.63	□□□□□ -0.23
RTG1	YOL067C	PDR18	P53756	1333 aa		13.63	□□□□□ -0.23
RTG1	YOL067C	MPH3	P0CE00	602 aa		13.62	□□□□□ -0.23
RTG1	YOL067C	UBX5	Q06682	500 aa		13.62	□□□□□ -0.23
RTG1	YOL067C	YPL260W	Q08977	551 aa		13.62	□□□□□ -0.23
RTG1	YOL067C	PRE8	P23639	250 aa		13.61	□□□□□ -0.23
RTG1	YOL067C	NMD2	P38798	1089 aa	Known RBP	13.61	□□□□□ -0.23
RTG1	YOL067C	POL32	P47110	350 aa		13.61	□□□□□ -0.23
RTG1	YOL067C	MLC1	P53141	149 aa		13.61	□□□□□ -0.23
RTG1	YOL067C	PIB2	P53191	635 aa		13.61	□□□□□ -0.23
RTG1	YOL067C	SPB4	P25808	606 aa	Predicted RBP	13.6	□□□□□ -0.23
RTG1	YOL067C	LDH1	P38139	375 aa		13.6	□□□□□ -0.23
RTG1	YOL067C	IRC8	P47046	822 aa		13.6	□□□□□ -0.23
RTG1	YOL067C	RMD1	Q03441	430 aa		13.6	□□□□□ -0.23
RTG1	YOL067C	YML037C	Q03703	340 aa		13.6	□□□□□ -0.23
RTG1	YOL067C	KAR5	Q04746	504 aa		13.59	□□□□□ -0.23
RTG1	YOL067C	SUB2	Q07478	446 aa	Known RBP	13.59	□□□□□ -0.23
RTG1	YOL067C	ERG12	P07277	443 aa		13.58	□□□□□ -0.24
RTG1	YOL067C	ECM21	P38167	1117 aa	Known RBP	13.58	□□□□□ -0.24
RTG1	YOL067C	PBY1	P38254	753 aa		13.58	□□□□□ -0.24
RTG1	YOL067C	YHL050C	P38721	697 aa		13.58	□□□□□ -0.24
RTG1	YOL067C	BRE5	P53741	515 aa	Known RBP	13.58	□□□□□ -0.24
RTG1	YOL067C	SRM1	P21827	482 aa		13.57	□□□□□ -0.24
RTG1	YOL067C	YOR131C	Q12486	218 aa		13.57	□□□□□ -0.24
RTG1	YOL067C	EUG1	P32474	517 aa		13.56	□□□□□ -0.24
RTG1	YOL067C	IOC3	P43596	787 aa		13.56	□□□□□ -0.24
RTG1	YOL067C	PRY3	P47033	881 aa		13.56	□□□□□ -0.24
RTG1	YOL067C	VMA2	P16140	517 aa	Known RBP	13.55	□□□□□ -0.24
RTG1	YOL067C	PER1	P25625	357 aa		13.55	□□□□□ -0.24
RTG1	YOL067C	PRS1	P32895	427 aa	Known RBP	13.55	□□□□□ -0.24
RTG1	YOL067C	GEF1	P37020	779 aa		13.55	□□□□□ -0.24
RTG1	YOL067C	CLA4	P48562	842 aa		13.55	□□□□□ -0.24
RTG1	YOL067C	YPR117W	Q06116	2489 aa		13.55	□□□□□ -0.24
RTG1	YOL067C	VID27	P40157	782 aa		13.54	□□□□□ -0.24
RTG1	YOL067C	ICL2	Q12031	575 aa		13.54	□□□□□ -0.24
RTG1	YOL067C	SUT2	Q12286	268 aa		13.54	□□□□□ -0.24
RTG1	YOL067C	DIT2	P21595	489 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	PKC1	P24583	1151 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	CHS3	P29465	1165 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	AFG3	P39925	761 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	YVH1	Q02256	364 aa	Known RBP	13.53	□□□□□ -0.24
RTG1	YOL067C	DUS4	Q06063	367 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	SKG3	Q06315	1026 aa		13.53	□□□□□ -0.24
RTG1	YOL067C	SAM2	P19358	384 aa	Known RBP	13.52	□□□□□ -0.25
RTG1	YOL067C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.52	□□□□□ -0.25	not detected
RTG1	YOL067C	NPL4	P33755	580 aa		13.52	□□□□□ -0.25
RTG1	YOL067C	MAM3	Q12296	706 aa		13.52	□□□□□ -0.25
RTG1	YOL067C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.52	□□□□□ -0.25	not detected
RTG1	YOL067C	UBR2	Q07963	1872 aa		13.51	□□□□□ -0.25
RTG1	YOL067C	LAM4	P38800	1345 aa		13.51	□□□□□ -0.25
RTG1	YOL067C	CHO2	P05374	869 aa	Known RBP	13.51	□□□□□ -0.25
RTG1	YOL067C	COQ1	P18900	473 aa		13.51	□□□□□ -0.25
RTG1	YOL067C	MRPS35	P53292	345 aa		13.51	□□□□□ -0.25
RTG1	YOL067C	ACE2	P21192	770 aa		13.5	□□□□□ -0.25
RTG1	YOL067C	UIP5	P36137	443 aa		13.5	□□□□□ -0.25
RTG1	YOL067C	RTS1	P38903	757 aa		13.5	□□□□□ -0.25
RTG1	YOL067C	FPR3	P38911	411 aa	Known RBP	13.5	□□□□□ -0.25
RTG1	YOL067C	MET7	Q08645	548 aa		13.5	□□□□□ -0.25
RTG1	YOL067C	BBC1	P47068	1157 aa		13.49	□□□□□ -0.25
RTG1	YOL067C	ENP2	P48234	707 aa	Known RBP	13.49	□□□□□ -0.25
RTG1	YOL067C	PKH3	Q03306	898 aa	Predicted RBP	13.49	□□□□□ -0.25
RTG1	YOL067C	MRD1	Q06106	887 aa	Known RBP	13.49	□□□□□ -0.25
RTG1	YOL067C	RAD61	Q99359	647 aa		13.49	□□□□□ -0.25
RTG1	YOL067C	MOT1	P32333	1867 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	BCS1	P32839	456 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	SLN1	P39928	1220 aa	Predicted RBP	13.48	□□□□□ -0.25
RTG1	YOL067C	FIR1	P40020	876 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	MXR1	P40029	184 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	YJR107W	P47145	328 aa		13.48	□□□□□ -0.25
RTG1	YOL067C	BUL2	Q03758	920 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms