RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID27	YNL212W	MET1	P36150	593 aa		4.58	□□□□□ -1.68
VID27	YNL212W	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
VID27	YNL212W	STS1	P38637	319 aa		4.58	□□□□□ -1.68
VID27	YNL212W	VPS27	P40343	622 aa	Known RBP	4.58	□□□□□ -1.68
VID27	YNL212W	NSE3	Q05541	303 aa		4.58	□□□□□ -1.68
VID27	YNL212W	POL5	P39985	1022 aa	Known RBP	4.57	□□□□□ -1.68
VID27	YNL212W	ECM23	Q02710	187 aa		4.57	□□□□□ -1.68
VID27	YNL212W	SEC6	P32844	805 aa		4.57	□□□□□ -1.68
VID27	YNL212W	VPS29	P38759	282 aa		4.57	□□□□□ -1.68
VID27	YNL212W	MNN1	P39106	762 aa		4.57	□□□□□ -1.68
VID27	YNL212W	YJR107W	P47145	328 aa		4.57	□□□□□ -1.68
VID27	YNL212W	TEA1	P47988	759 aa		4.57	□□□□□ -1.68
VID27	YNL212W	YGL081W	P53156	320 aa		4.57	□□□□□ -1.68
VID27	YNL212W	RPN4	Q03465	531 aa		4.57	□□□□□ -1.68
VID27	YNL212W	COG4	Q06096	861 aa		4.57	□□□□□ -1.68
VID27	YNL212W	RAD59	Q12223	238 aa		4.57	□□□□□ -1.68
VID27	YNL212W	UBR2	Q07963	1872 aa		4.56	□□□□□ -1.68
VID27	YNL212W	SIT4	P20604	311 aa		4.56	□□□□□ -1.68
VID27	YNL212W	MFT1	P33441	392 aa	Known RBP	4.56	□□□□□ -1.68
VID27	YNL212W	BCH2	P36122	765 aa		4.56	□□□□□ -1.68
VID27	YNL212W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
VID27	YNL212W	YJR142W	P47173	342 aa		4.56	□□□□□ -1.68
VID27	YNL212W	CRF1	Q04930	467 aa		4.56	□□□□□ -1.68
VID27	YNL212W	YDJ1	P25491	409 aa	Known RBP	4.56	□□□□□ -1.68
VID27	YNL212W	BUD6	P41697	788 aa		4.56	□□□□□ -1.68
VID27	YNL212W	CEF1	Q03654	590 aa	Predicted RBP	4.56	□□□□□ -1.68
VID27	YNL212W	MNL2	Q12205	849 aa		4.56	□□□□□ -1.68
VID27	YNL212W	NKP1	Q12493	238 aa		4.56	□□□□□ -1.68
VID27	YNL212W	VID30	P53076	958 aa		4.55	□□□□□ -1.68
VID27	YNL212W	ENT2	Q05785	613 aa		4.55	□□□□□ -1.68
VID27	YNL212W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
VID27	YNL212W	FUI1	P38196	639 aa		4.55	□□□□□ -1.68
VID27	YNL212W	TPS3	P38426	1054 aa	Known RBP	4.55	□□□□□ -1.68
VID27	YNL212W	UBP12	P39538	1254 aa		4.55	□□□□□ -1.68
VID27	YNL212W	EPS1	P40557	701 aa		4.55	□□□□□ -1.68
VID27	YNL212W	RIM21	P48565	533 aa		4.55	□□□□□ -1.68
VID27	YNL212W	PKH3	Q03306	898 aa	Predicted RBP	4.55	□□□□□ -1.68
VID27	YNL212W	RLP24	Q07915	199 aa	Known RBP	4.55	□□□□□ -1.68
VID27	YNL212W	CDC53	Q12018	815 aa	Known RBP	4.55	□□□□□ -1.68
VID27	YNL212W	SSF2	Q12153	453 aa	Predicted RBP	4.55	□□□□□ -1.68
VID27	YNL212W	RPO41	P13433	1351 aa	Known RBP	4.55	□□□□□ -1.68
VID27	YNL212W	TRX2	P22803	104 aa	Known RBP	4.54	□□□□□ -1.68
VID27	YNL212W	YEN1	P40028	759 aa		4.54	□□□□□ -1.68
VID27	YNL212W	MAD1	P40957	749 aa		4.54	□□□□□ -1.68
VID27	YNL212W	MPP10	P47083	593 aa	Known RBP	4.54	□□□□□ -1.68
VID27	YNL212W	PWP2	P25635	923 aa	Known RBP	4.54	□□□□□ -1.68
VID27	YNL212W	ASH1	P34233	588 aa		4.54	□□□□□ -1.68
VID27	YNL212W	VPS24	P36095	224 aa	Known RBP	4.54	□□□□□ -1.68
VID27	YNL212W	KTR7	P40504	517 aa		4.54	□□□□□ -1.68
VID27	YNL212W	IES1	P43579	692 aa		4.54	□□□□□ -1.68
VID27	YNL212W	YJL049W	P47048	450 aa		4.54	□□□□□ -1.68
VID27	YNL212W	WRS1	Q12109	432 aa	Known RBP	4.54	□□□□□ -1.68
VID27	YNL212W	YOR131C	Q12486	218 aa		4.54	□□□□□ -1.68
VID27	YNL212W	PMD1	P32634	1753 aa		4.53	□□□□□ -1.68
VID27	YNL212W	GCN1	P33892	2672 aa	Known RBP	4.53	□□□□□ -1.68
VID27	YNL212W	UBX7	P38349	436 aa		4.53	□□□□□ -1.68
VID27	YNL212W	KIC1	P38692	1080 aa		4.53	□□□□□ -1.68
VID27	YNL212W	FYV10	P40492	516 aa		4.53	□□□□□ -1.68
VID27	YNL212W	IRC3	Q06683	689 aa		4.53	□□□□□ -1.68
VID27	YNL212W	MET6	P05694	767 aa	Known RBP	4.52	□□□□□ -1.69
VID27	YNL212W	PEP12	P32854	288 aa		4.52	□□□□□ -1.69
VID27	YNL212W	VPS16	Q03308	798 aa		4.52	□□□□□ -1.69
VID27	YNL212W	ICL2	Q12031	575 aa		4.52	□□□□□ -1.69
VID27	YNL212W	ERP4	Q12450	207 aa		4.52	□□□□□ -1.69
VID27	YNL212W	ESF2	P53743	316 aa	Known RBP	4.52	□□□□□ -1.69
VID27	YNL212W	ESS1	P22696	170 aa		4.51	□□□□□ -1.69
VID27	YNL212W	SPT5	P27692	1063 aa	Known RBP	4.51	□□□□□ -1.69
VID27	YNL212W	RPN12	P32496	274 aa		4.51	□□□□□ -1.69
VID27	YNL212W	MSH4	P40965	878 aa	Predicted RBP	4.51	□□□□□ -1.69
VID27	YNL212W	RAT1	Q02792	1006 aa	Known RBP	4.51	□□□□□ -1.69
VID27	YNL212W	SVL3	Q03088	825 aa	Known RBP	4.51	□□□□□ -1.69
VID27	YNL212W	PIN2	Q12057	282 aa		4.51	□□□□□ -1.69
VID27	YNL212W	PTC3	P34221	468 aa	Known RBP	4.51	□□□□□ -1.69
VID27	YNL212W	OYE3	P41816	400 aa	Predicted RBP	4.51	□□□□□ -1.69
VID27	YNL212W	ATG1	P53104	897 aa		4.51	□□□□□ -1.69
VID27	YNL212W	ITC1	P53125	1264 aa		4.51	□□□□□ -1.69
VID27	YNL212W	DPL1	Q05567	589 aa		4.51	□□□□□ -1.69
VID27	YNL212W	YLR326W	Q06170	240 aa	Known RBP	4.51	□□□□□ -1.69
VID27	YNL212W	NUT2	Q06213	157 aa		4.51	□□□□□ -1.69
VID27	YNL212W	BDF2	Q07442	638 aa		4.51	□□□□□ -1.69
VID27	YNL212W	MET4	P32389	672 aa		4.5	□□□□□ -1.69
VID27	YNL212W	BLI1	P35727	113 aa		4.5	□□□□□ -1.69
VID27	YNL212W	JIP4	Q03361	876 aa		4.5	□□□□□ -1.69
VID27	YNL212W	UTP14	Q04500	899 aa	Known RBP	4.5	□□□□□ -1.69
VID27	YNL212W	TY3A-G	Q12173	290 aa		4.5	□□□□□ -1.69
VID27	YNL212W	MMP1	Q12372	583 aa		4.5	□□□□□ -1.69
VID27	YNL212W	TY3A-I	Q99219	290 aa		4.5	□□□□□ -1.69
VID27	YNL212W	DAL5	P15365	543 aa		4.5	□□□□□ -1.69
VID27	YNL212W	GLO3	P38682	493 aa	Known RBP	4.5	□□□□□ -1.69
VID27	YNL212W	HST2	P53686	357 aa		4.5	□□□□□ -1.69
VID27	YNL212W	GAL2	P13181	574 aa		4.49	□□□□□ -1.69
VID27	YNL212W	ARG8	P18544	423 aa		4.49	□□□□□ -1.69
VID27	YNL212W	DBP1	P24784	617 aa	Known RBP	4.49	□□□□□ -1.69
VID27	YNL212W	SCJ1	P25303	377 aa		4.49	□□□□□ -1.69
VID27	YNL212W	YJU3	P28321	313 aa		4.49	□□□□□ -1.69
VID27	YNL212W	MCM2	P29469	868 aa		4.49	□□□□□ -1.69
VID27	YNL212W	EBP2	P36049	427 aa	Known RBP	4.49	□□□□□ -1.69
VID27	YNL212W	FOL1	P53848	824 aa		4.49	□□□□□ -1.69
VID27	YNL212W	MEH1	Q02205	184 aa		4.49	□□□□□ -1.69
VID27	YNL212W	VMS1	Q04311	632 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms