RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A KTR2P33550 425 aa5.8□□□□□ -1.48
YSF3YNL138W-A LDH1P38139 375 aa5.8□□□□□ -1.48
YSF3YNL138W-A MDJ2P42834 146 aa5.8□□□□□ -1.48
YSF3YNL138W-A YMR265CQ03508 461 aaKnown RBP5.8□□□□□ -1.48
YSF3YNL138W-A SSN2P38931 1420 aa5.8□□□□□ -1.48
YSF3YNL138W-A DIT1P21623 536 aa5.79□□□□□ -1.48
YSF3YNL138W-A DYS1P38791 387 aa5.79□□□□□ -1.48
YSF3YNL138W-A TOP2P06786 1428 aaKnown RBP5.79□□□□□ -1.48
YSF3YNL138W-A RPC31P17890 251 aa5.78□□□□□ -1.48
YSF3YNL138W-A KRE33P53914 1056 aaKnown RBP5.78□□□□□ -1.48
YSF3YNL138W-A CUS1Q02554 436 aaPredicted RBP5.78□□□□□ -1.48
YSF3YNL138W-A BSD2P38356 321 aa5.77□□□□□ -1.49
YSF3YNL138W-A HXT8P40886 569 aa5.77□□□□□ -1.49
YSF3YNL138W-A SPR3P41901 512 aa5.77□□□□□ -1.49
YSF3YNL138W-A ACF4P47129 309 aa5.77□□□□□ -1.49
YSF3YNL138W-A MSN1P22148 382 aa5.76□□□□□ -1.49
YSF3YNL138W-A SKP1P52286 194 aa5.76□□□□□ -1.49
YSF3YNL138W-A YNR040WP53736 256 aa5.76□□□□□ -1.49
YSF3YNL138W-A ADE12P80210 433 aaKnown RBP5.76□□□□□ -1.49
YSF3YNL138W-A NOP8Q08287 484 aaPredicted RBP5.76□□□□□ -1.49
YSF3YNL138W-A YHL050CP38721 697 aa5.75□□□□□ -1.49
YSF3YNL138W-A YHR219WP38900 624 aa5.75□□□□□ -1.49
YSF3YNL138W-A CEM1P39525 442 aa5.75□□□□□ -1.49
YSF3YNL138W-A YOR296WQ08748 1289 aa5.75□□□□□ -1.49
YSF3YNL138W-A FRT1Q99332 602 aa5.75□□□□□ -1.49
YSF3YNL138W-A GIP1P38229 639 aa5.74□□□□□ -1.49
YSF3YNL138W-A NUT2Q06213 157 aa5.74□□□□□ -1.49
YSF3YNL138W-A FPS1P23900 669 aa5.73□□□□□ -1.49
YSF3YNL138W-A ISW1P38144 1129 aa5.73□□□□□ -1.49
YSF3YNL138W-A APM2P38700 605 aa5.73□□□□□ -1.49
YSF3YNL138W-A STM1P39015 273 aaKnown RBP5.73□□□□□ -1.49
YSF3YNL138W-A RGD2P43556 714 aa5.73□□□□□ -1.49
YSF3YNL138W-A ITC1P53125 1264 aa5.73□□□□□ -1.49
YSF3YNL138W-A SEN54Q02825 467 aaPredicted RBP5.73□□□□□ -1.49
YSF3YNL138W-A HPF1Q05164 967 aa5.73□□□□□ -1.49
YSF3YNL138W-A SYT1Q06836 1226 aa5.73□□□□□ -1.49
YSF3YNL138W-A YDR461C-AQ2V2P7 80 aa5.73□□□□□ -1.49
YSF3YNL138W-A NCL1P38205 684 aaKnown RBP5.72□□□□□ -1.49
YSF3YNL138W-A MSC7P38694 644 aa5.72□□□□□ -1.49
YSF3YNL138W-A FIR1P40020 876 aa5.72□□□□□ -1.49
YSF3YNL138W-A TRS120Q04183 1289 aa5.72□□□□□ -1.49
YSF3YNL138W-A ULS1Q08562 1619 aa5.71□□□□□ -1.5
YSF3YNL138W-A PDR15Q04182 1529 aaKnown RBP5.71□□□□□ -1.5
YSF3YNL138W-A SMC1P32908 1225 aa5.71□□□□□ -1.5
YSF3YNL138W-A SLD2P34252 453 aa5.71□□□□□ -1.5
YSF3YNL138W-A RAD55P38953 406 aa5.71□□□□□ -1.5
YSF3YNL138W-A IPL1P38991 367 aa5.71□□□□□ -1.5
YSF3YNL138W-A UFD2P54860 961 aa5.71□□□□□ -1.5
YSF3YNL138W-A TY1A-DR2Q03964 440 aaKnown RBP5.71□□□□□ -1.5
YSF3YNL138W-A NTA1P40354 457 aa5.7□□□□□ -1.5
YSF3YNL138W-A LYS5P50113 272 aa5.7□□□□□ -1.5
YSF3YNL138W-A YGR035CP53222 116 aa5.7□□□□□ -1.5
YSF3YNL138W-A GPI13Q07830 1017 aa5.7□□□□□ -1.5
YSF3YNL138W-A MSC6Q08818 692 aaKnown RBP5.7□□□□□ -1.5
YSF3YNL138W-A MNL2Q12205 849 aa5.7□□□□□ -1.5
YSF3YNL138W-A TIF6Q12522 245 aaKnown RBP5.7□□□□□ -1.5
YSF3YNL138W-A SPP41P38904 1435 aa5.7□□□□□ -1.5
YSF3YNL138W-A VTH1P40438 1549 aa5.69□□□□□ -1.5
YSF3YNL138W-A VTH2P40890 1549 aa5.69□□□□□ -1.5
YSF3YNL138W-A EMG1Q06287 252 aaKnown RBP5.69□□□□□ -1.5
YSF3YNL138W-A DNF3Q12674 1656 aa5.69□□□□□ -1.5
YSF3YNL138W-A RPP1AP05318 106 aaPredicted RBP5.68□□□□□ -1.5
YSF3YNL138W-A AIM46P38885 310 aa5.68□□□□□ -1.5
YSF3YNL138W-A PSY2P40164 858 aa5.68□□□□□ -1.5
YSF3YNL138W-A IDI1P15496 288 aa5.67□□□□□ -1.5
YSF3YNL138W-A IRS4P36115 615 aaKnown RBP5.67□□□□□ -1.5
YSF3YNL138W-A YIL165CP40446 119 aa5.67□□□□□ -1.5
YSF3YNL138W-A PRK1P40494 810 aa5.67□□□□□ -1.5
YSF3YNL138W-A THI12P42883 340 aa5.67□□□□□ -1.5
YSF3YNL138W-A THI5P43534 340 aa5.67□□□□□ -1.5
YSF3YNL138W-A JJJ3P47138 172 aa5.67□□□□□ -1.5
YSF3YNL138W-A THI11P47183 340 aa5.67□□□□□ -1.5
YSF3YNL138W-A YNL011CP53980 444 aa5.67□□□□□ -1.5
YSF3YNL138W-A HEH2Q03281 663 aa5.67□□□□□ -1.5
YSF3YNL138W-A THI13Q07748 340 aa5.67□□□□□ -1.5
YSF3YNL138W-A WHI5Q12416 295 aa5.67□□□□□ -1.5
YSF3YNL138W-A YBR287WP38355 427 aa5.66□□□□□ -1.5
YSF3YNL138W-A PPX1P38698 397 aa5.66□□□□□ -1.5
YSF3YNL138W-A DPH6Q12429 685 aa5.66□□□□□ -1.5
YSF3YNL138W-A TSC11P40061 1430 aa5.65□□□□□ -1.5
YSF3YNL138W-A SEC20P28791 383 aa5.65□□□□□ -1.5
YSF3YNL138W-A YER156CP40093 338 aaKnown RBP5.65□□□□□ -1.5
YSF3YNL138W-A RSC4Q02206 625 aa5.65□□□□□ -1.5
YSF3YNL138W-A ARO1P08566 1588 aaKnown RBP5.64□□□□□ -1.51
YSF3YNL138W-A MRP10O75012 95 aa5.64□□□□□ -1.51
YSF3YNL138W-A MET4P32389 672 aa5.64□□□□□ -1.51
YSF3YNL138W-A PPT1P53043 513 aa5.64□□□□□ -1.51
YSF3YNL138W-A SNT2P53127 1403 aa5.64□□□□□ -1.51
YSF3YNL138W-A GPM1P00950 247 aaKnown RBP5.63□□□□□ -1.51
YSF3YNL138W-A TRK2P28584 889 aa5.63□□□□□ -1.51
YSF3YNL138W-A YJL181WP46987 611 aa5.63□□□□□ -1.51
YSF3YNL138W-A CDC55Q00362 526 aa5.63□□□□□ -1.51
YSF3YNL138W-A PDC5P16467 563 aaKnown RBP5.62□□□□□ -1.51
YSF3YNL138W-A TRM3Q07527 1436 aa5.62□□□□□ -1.51
YSF3YNL138W-A USO1P25386 1790 aa5.61□□□□□ -1.51
YSF3YNL138W-A CTR9P89105 1077 aa5.61□□□□□ -1.51
YSF3YNL138W-A BSC2Q05611 235 aa5.61□□□□□ -1.51
YSF3YNL138W-A SMC4Q12267 1418 aa5.61□□□□□ -1.51
YSF3YNL138W-A PDR10P51533 1564 aa5.6□□□□□ -1.51
YSF3YNL138W-A HEM3P28789 327 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms