RNA–Protein interactions for RNA: YNL119W

NCS2, Transcript of Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs, yeast

Gene NCS2, Length 1,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS2	YNL119W	DNA2	P38859	1522 aa		4.75	□□□□□ -1.65
NCS2	YNL119W	GPM1	P00950	247 aa	Known RBP	4.75	□□□□□ -1.65
NCS2	YNL119W	IDI1	P15496	288 aa		4.75	□□□□□ -1.65
NCS2	YNL119W	ASF1	P32447	279 aa		4.75	□□□□□ -1.65
NCS2	YNL119W	GCD6	P32501	712 aa	Known RBP	4.75	□□□□□ -1.65
NCS2	YNL119W	CIC1	P38779	376 aa	Known RBP	4.74	□□□□□ -1.65
NCS2	YNL119W	PPT1	P53043	513 aa		4.74	□□□□□ -1.65
NCS2	YNL119W	PDC5	P16467	563 aa	Known RBP	4.73	□□□□□ -1.65
NCS2	YNL119W	YCK2	P23292	546 aa	Known RBP	4.73	□□□□□ -1.65
NCS2	YNL119W	MET1	P36150	593 aa		4.73	□□□□□ -1.65
NCS2	YNL119W	PRK1	P40494	810 aa		4.73	□□□□□ -1.65
NCS2	YNL119W	NOC3	Q07896	663 aa	Predicted RBP	4.73	□□□□□ -1.65
NCS2	YNL119W	MNL2	Q12205	849 aa		4.73	□□□□□ -1.65
NCS2	YNL119W	KOG1	P38873	1557 aa		4.72	□□□□□ -1.65
NCS2	YNL119W	YHL008C	P38750	627 aa		4.72	□□□□□ -1.65
NCS2	YNL119W	FUS1	P11710	512 aa		4.71	□□□□□ -1.66
NCS2	YNL119W	VPS35	P34110	944 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	MGE1	P38523	228 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	YJL181W	P46987	611 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	GPI13	Q07830	1017 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	OXR1	Q08952	273 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	WHI5	Q12416	295 aa		4.7	□□□□□ -1.66
NCS2	YNL119W	MRP10	O75012	95 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	PYC2	P32327	1180 aa	Known RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	MET4	P32389	672 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	MCX1	P38323	520 aa	Predicted RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	INP51	P40559	946 aa	Known RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	SLP1	Q12232	587 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	PHO4	P07270	312 aa	Known RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	ALG14	P38242	237 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	AMN1	P38285	549 aa	Predicted RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	LEM3	P42838	414 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	POL32	P47110	350 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	YNR014W	P53719	212 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	INP54	Q08227	384 aa	Known RBP	4.69	□□□□□ -1.66
NCS2	YNL119W	NHA1	Q99271	985 aa		4.69	□□□□□ -1.66
NCS2	YNL119W	FLP1	P03870	423 aa		4.68	□□□□□ -1.66
NCS2	YNL119W	GUP1	P53154	560 aa		4.68	□□□□□ -1.66
NCS2	YNL119W	BIO5	P53744	561 aa	Known RBP	4.68	□□□□□ -1.66
NCS2	YNL119W	SWR1	Q05471	1514 aa		4.68	□□□□□ -1.66
NCS2	YNL119W	ALD3	P54114	506 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	CTR9	P89105	1077 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	MSH6	Q03834	1242 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	GIS4	Q04233	774 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	YCS4	Q06156	1176 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	PMT7	Q06644	662 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	SOG2	Q08817	791 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	YDR215C	Q12240	137 aa		4.67	□□□□□ -1.66
NCS2	YNL119W	KAR2	P16474	682 aa	Known RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	NAR1	P23503	491 aa	Known RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	RPT1	P33299	467 aa	Known RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	PGM2	P37012	569 aa	Known RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	RVS167	P39743	482 aa	Known RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	SLN1	P39928	1220 aa	Predicted RBP	4.66	□□□□□ -1.66
NCS2	YNL119W	BOI2	P39969	1040 aa		4.66	□□□□□ -1.66
NCS2	YNL119W	DAK2	P43550	591 aa		4.66	□□□□□ -1.66
NCS2	YNL119W	MCA1	Q08601	432 aa		4.66	□□□□□ -1.66
NCS2	YNL119W	NUT1	P53114	1132 aa		4.65	□□□□□ -1.66
NCS2	YNL119W	GLO4	Q12320	285 aa		4.65	□□□□□ -1.66
NCS2	YNL119W	MAC1	P35192	417 aa		4.64	□□□□□ -1.67
NCS2	YNL119W	GIP2	P40036	548 aa		4.64	□□□□□ -1.67
NCS2	YNL119W	FET4	P40988	552 aa		4.64	□□□□□ -1.67
NCS2	YNL119W	YJR124C	P47159	448 aa		4.64	□□□□□ -1.67
NCS2	YNL119W	SOK2	P53438	785 aa	Predicted RBP	4.64	□□□□□ -1.67
NCS2	YNL119W	SAC7	P17121	654 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	TFA2	P36145	328 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	SHU2	P38957	223 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	NEO1	P40527	1151 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	LSB6	P42951	607 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	YNR065C	P53751	1116 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	SPO71	Q03868	1245 aa		4.63	□□□□□ -1.67
NCS2	YNL119W	COB	P00163	385 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	NPR1	P22211	790 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	GLT1	Q12680	2145 aa	Known RBP	4.62	□□□□□ -1.67
NCS2	YNL119W	ATE1	P16639	503 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	MCM5	P29496	775 aa	Known RBP	4.62	□□□□□ -1.67
NCS2	YNL119W	PRP40	P33203	583 aa	Known RBP	4.62	□□□□□ -1.67
NCS2	YNL119W	RIM11	P38615	370 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	TED1	P40533	473 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	SAP155	P43612	1002 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	SNU71	P53207	620 aa	Known RBP	4.62	□□□□□ -1.67
NCS2	YNL119W	DSE4	P53753	1117 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	YAF9	P53930	226 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
NCS2	YNL119W	CMR1	Q12510	522 aa	Known RBP	4.62	□□□□□ -1.67
NCS2	YNL119W	TY4B-P	A0A0B7P3V8	1104 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	HVG1	P0CE11	249 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	PRP5	P21372	849 aa	Predicted RBP	4.61	□□□□□ -1.67
NCS2	YNL119W	PAN5	P38787	379 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	IRC24	P40580	263 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	YJR107W	P47145	328 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	MON1	P53129	644 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	YGR122W	P53272	402 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	RRP15	Q06511	250 aa	Predicted RBP	4.61	□□□□□ -1.67
NCS2	YNL119W	TY4A-H	Q6Q5P6	413 aa		4.61	□□□□□ -1.67
NCS2	YNL119W	RRM3	P38766	723 aa		4.6	□□□□□ -1.67
NCS2	YNL119W	HAS1	Q03532	505 aa	Known RBP	4.6	□□□□□ -1.67
NCS2	YNL119W	YLL054C	Q12244	843 aa		4.6	□□□□□ -1.67
NCS2	YNL119W	DUR3	P33413	735 aa		4.59	□□□□□ -1.67
NCS2	YNL119W	SQT1	P35184	431 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms