RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C BI4P03879 638 aa3.04□□□□□ -1.92
SGS1YMR190C MFB1Q04922 465 aa3.04□□□□□ -1.92
SGS1YMR190C EAF1Q06337 982 aa3.04□□□□□ -1.92
SGS1YMR190C MDM20Q12387 796 aaKnown RBP3.04□□□□□ -1.92
SGS1YMR190C BRN1P38170 754 aa3.03□□□□□ -1.92
SGS1YMR190C PTK2P47116 818 aaKnown RBP3.03□□□□□ -1.92
SGS1YMR190C HGH1P48362 394 aaKnown RBP3.03□□□□□ -1.92
SGS1YMR190C FUB1P25659 250 aa3.03□□□□□ -1.92
SGS1YMR190C COQ8P27697 501 aa3.03□□□□□ -1.92
SGS1YMR190C UBP12P39538 1254 aa3.03□□□□□ -1.92
SGS1YMR190C SOL4P53315 255 aa3.03□□□□□ -1.92
SGS1YMR190C YNR061CP53747 219 aa3.03□□□□□ -1.92
SGS1YMR190C YDR341CQ05506 607 aaKnown RBP3.03□□□□□ -1.92
SGS1YMR190C DAP1Q12091 152 aa3.03□□□□□ -1.92
SGS1YMR190C MNL2Q12205 849 aa3.03□□□□□ -1.92
SGS1YMR190C INP54Q08227 384 aaKnown RBP3.03□□□□□ -1.92
SGS1YMR190C PCL8Q08966 492 aa3.03□□□□□ -1.92
SGS1YMR190C PTP1P25044 335 aa3.02□□□□□ -1.93
SGS1YMR190C MDM1Q01846 1127 aa3.02□□□□□ -1.93
SGS1YMR190C HSP104P31539 908 aaKnown RBP3.02□□□□□ -1.93
SGS1YMR190C RDH54P38086 958 aa3.02□□□□□ -1.93
SGS1YMR190C BUD16P39988 312 aa3.02□□□□□ -1.93
SGS1YMR190C APL6P46682 809 aa3.02□□□□□ -1.93
SGS1YMR190C TPM1P17536 199 aaKnown RBP3.02□□□□□ -1.93
SGS1YMR190C UIP5P36137 443 aa3.02□□□□□ -1.93
SGS1YMR190C YIL092WP40497 633 aa3.02□□□□□ -1.93
SGS1YMR190C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SGS1YMR190C DSD1P53095 428 aa3.02□□□□□ -1.93
SGS1YMR190C YGR125WP53273 1036 aa3.02□□□□□ -1.93
SGS1YMR190C RTT109Q07794 436 aa3.02□□□□□ -1.93
SGS1YMR190C BRL1P38770 471 aa3.01□□□□□ -1.93
SGS1YMR190C YER158CP40095 573 aa3.01□□□□□ -1.93
SGS1YMR190C YNL050CP53952 270 aa3.01□□□□□ -1.93
SGS1YMR190C LDB19Q12502 818 aa3.01□□□□□ -1.93
SGS1YMR190C NMD3P38861 518 aaKnown RBP3.01□□□□□ -1.93
SGS1YMR190C HAL5P38970 855 aaKnown RBP3.01□□□□□ -1.93
SGS1YMR190C ALD5P40047 520 aaKnown RBP3.01□□□□□ -1.93
SGS1YMR190C LSB6P42951 607 aa3.01□□□□□ -1.93
SGS1YMR190C PIP2P52960 996 aa3.01□□□□□ -1.93
SGS1YMR190C GAS4Q08271 471 aa3.01□□□□□ -1.93
SGS1YMR190C STB3Q12427 513 aa3.01□□□□□ -1.93
SGS1YMR190C MSD1P15179 658 aaKnown RBP3.01□□□□□ -1.93
SGS1YMR190C NTH2P35172 780 aa3.01□□□□□ -1.93
SGS1YMR190C RTR1P40084 226 aaPredicted RBP3.01□□□□□ -1.93
SGS1YMR190C PMA1P05030 918 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C VMA2P16140 517 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C NMD2P38798 1089 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C GGA2P38817 585 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C YIR014WP40570 242 aa3□□□□□ -1.93
SGS1YMR190C ALT2P52892 507 aa3□□□□□ -1.93
SGS1YMR190C YLR271WQ06152 274 aa3□□□□□ -1.93
SGS1YMR190C ISW2Q08773 1120 aa3□□□□□ -1.93
SGS1YMR190C AKL1P38080 1108 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C MTC5Q03897 1148 aa3□□□□□ -1.93
SGS1YMR190C PRE10P21242 288 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
SGS1YMR190C PUF4P25339 888 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
SGS1YMR190C EUG1P32474 517 aa3□□□□□ -1.93
SGS1YMR190C PAM1P37304 830 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C GRS1P38088 690 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C IMG2P25642 146 aaPredicted RBP3□□□□□ -1.93
SGS1YMR190C MRF1P30775 413 aaPredicted RBP3□□□□□ -1.93
SGS1YMR190C RXT2P38255 430 aa3□□□□□ -1.93
SGS1YMR190C KSP1P38691 1029 aaKnown RBP3□□□□□ -1.93
SGS1YMR190C FIG2P25653 1609 aa2.99□□□□□ -1.93
SGS1YMR190C SAC3P46674 1301 aa2.99□□□□□ -1.93
SGS1YMR190C CST26P38226 397 aa2.99□□□□□ -1.93
SGS1YMR190C PIB2P53191 635 aa2.99□□□□□ -1.93
SGS1YMR190C MDR1P53258 950 aa2.99□□□□□ -1.93
SGS1YMR190C TIF1P10081 395 aaKnown RBP2.99□□□□□ -1.93
SGS1YMR190C TPD3P31383 635 aa2.99□□□□□ -1.93
SGS1YMR190C MET13P53128 600 aa2.99□□□□□ -1.93
SGS1YMR190C ENV11P53246 860 aa2.99□□□□□ -1.93
SGS1YMR190C FAS2P19097 1887 aaKnown RBP2.99□□□□□ -1.93
SGS1YMR190C FUS1P11710 512 aa2.99□□□□□ -1.93
SGS1YMR190C APN2P38207 520 aa2.99□□□□□ -1.93
SGS1YMR190C SSF1P38789 453 aaPredicted RBP2.99□□□□□ -1.93
SGS1YMR190C HKR1P41809 1802 aa2.98□□□□□ -1.93
SGS1YMR190C PWP2P25635 923 aaKnown RBP2.98□□□□□ -1.93
SGS1YMR190C YBL036CP38197 257 aa2.98□□□□□ -1.93
SGS1YMR190C SFB3P38810 929 aa2.98□□□□□ -1.93
SGS1YMR190C UBP16Q02863 499 aa2.98□□□□□ -1.93
SGS1YMR190C PHR1P05066 565 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SGS1YMR190C MCM4P30665 933 aaKnown RBP2.98□□□□□ -1.93
SGS1YMR190C MRPL7P36519 292 aa2.98□□□□□ -1.93
SGS1YMR190C VID30P53076 958 aa2.98□□□□□ -1.93
SGS1YMR190C IMP4P53941 290 aaKnown RBP2.98□□□□□ -1.93
SGS1YMR190C HFI1Q12060 488 aa2.98□□□□□ -1.93
SGS1YMR190C HMF1P40037 129 aaKnown RBP2.98□□□□□ -1.93
SGS1YMR190C YJR008WP47085 338 aa2.98□□□□□ -1.93
SGS1YMR190C POA1P38218 177 aa2.97□□□□□ -1.93
SGS1YMR190C CST6P40535 587 aa2.97□□□□□ -1.93
SGS1YMR190C FOL2P51601 243 aaKnown RBP2.97□□□□□ -1.93
SGS1YMR190C YGL082WP53155 381 aa2.97□□□□□ -1.93
SGS1YMR190C YDR306CQ06640 478 aa2.97□□□□□ -1.93
SGS1YMR190C HAA1Q12753 694 aaKnown RBP2.97□□□□□ -1.93
SGS1YMR190C NCB2Q92317 146 aa2.97□□□□□ -1.93
SGS1YMR190C KRE2P27809 442 aa2.97□□□□□ -1.93
SGS1YMR190C OSH2Q12451 1283 aa2.97□□□□□ -1.93
SGS1YMR190C GAP1P19145 602 aaPredicted RBP2.97□□□□□ -1.93
SGS1YMR190C PTC4P38089 393 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms