RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W GUP1P53154 560 aa7.65□□□□□ -1.18
CSI1YMR025W SOG2Q08817 791 aa7.65□□□□□ -1.18
CSI1YMR025W FUS1P11710 512 aa7.64□□□□□ -1.19
CSI1YMR025W YKR073CP36153 106 aa7.64□□□□□ -1.19
CSI1YMR025W NTA1P40354 457 aa7.64□□□□□ -1.19
CSI1YMR025W SAF1P38352 637 aa7.63□□□□□ -1.19
CSI1YMR025W MED7Q08278 222 aa7.63□□□□□ -1.19
CSI1YMR025W REC8Q12188 680 aa7.63□□□□□ -1.19
CSI1YMR025W LSO1Q3E827 93 aa7.63□□□□□ -1.19
CSI1YMR025W NAM7P30771 971 aaKnown RBP7.62□□□□□ -1.19
CSI1YMR025W AKR1P39010 764 aa7.62□□□□□ -1.19
CSI1YMR025W LEM3P42838 414 aa7.62□□□□□ -1.19
CSI1YMR025W TIF6Q12522 245 aaKnown RBP7.62□□□□□ -1.19
CSI1YMR025W RAD55P38953 406 aa7.61□□□□□ -1.19
CSI1YMR025W POL5P39985 1022 aaKnown RBP7.6□□□□□ -1.19
CSI1YMR025W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
CSI1YMR025W CHS2P14180 963 aa7.59□□□□□ -1.19
CSI1YMR025W BOL3P39724 118 aa7.59□□□□□ -1.19
CSI1YMR025W YGR130CP53278 816 aa7.59□□□□□ -1.19
CSI1YMR025W FUR4P05316 633 aaKnown RBP7.58□□□□□ -1.2
CSI1YMR025W SMC1P32908 1225 aa7.58□□□□□ -1.2
CSI1YMR025W IRS4P36115 615 aaKnown RBP7.58□□□□□ -1.2
CSI1YMR025W TOS1P38288 455 aa7.58□□□□□ -1.2
CSI1YMR025W PSY2P40164 858 aa7.58□□□□□ -1.2
CSI1YMR025W MAE1P36013 669 aaKnown RBP7.57□□□□□ -1.2
CSI1YMR025W SPO71Q03868 1245 aa7.57□□□□□ -1.2
CSI1YMR025W SUB2Q07478 446 aaKnown RBP7.57□□□□□ -1.2
CSI1YMR025W NEO1P40527 1151 aa7.56□□□□□ -1.2
CSI1YMR025W YJR124CP47159 448 aa7.56□□□□□ -1.2
CSI1YMR025W YNR065CP53751 1116 aa7.56□□□□□ -1.2
CSI1YMR025W LIP5P32875 414 aa7.55□□□□□ -1.2
CSI1YMR025W NCE103P53615 221 aa7.55□□□□□ -1.2
CSI1YMR025W ELG1Q12050 791 aa7.55□□□□□ -1.2
CSI1YMR025W CTH1P47976 325 aa7.54□□□□□ -1.2
CSI1YMR025W GLO4Q12320 285 aa7.54□□□□□ -1.2
CSI1YMR025W HVG1P0CE11 249 aa7.53□□□□□ -1.2
CSI1YMR025W PYC2P32327 1180 aaKnown RBP7.53□□□□□ -1.2
CSI1YMR025W PUB1P32588 453 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
CSI1YMR025W HAS1Q03532 505 aaKnown RBP7.53□□□□□ -1.2
CSI1YMR025W ERS1P17261 260 aa7.52□□□□□ -1.21
CSI1YMR025W SPO74P45819 413 aa7.51□□□□□ -1.21
CSI1YMR025W BRE4Q07660 1125 aa7.51□□□□□ -1.21
CSI1YMR025W CYC7P00045 113 aa7.5□□□□□ -1.21
CSI1YMR025W IRC24P40580 263 aa7.5□□□□□ -1.21
CSI1YMR025W AVT1P47082 602 aa7.5□□□□□ -1.21
CSI1YMR025W KIP3P53086 805 aaKnown RBP7.5□□□□□ -1.21
CSI1YMR025W RLF2Q12495 606 aa7.5□□□□□ -1.21
CSI1YMR025W FET4P40988 552 aa7.48□□□□□ -1.21
CSI1YMR025W MAG2Q06436 670 aaKnown RBP7.48□□□□□ -1.21
CSI1YMR025W MSB1P21339 1137 aaKnown RBP7.47□□□□□ -1.21
CSI1YMR025W CTR9P89105 1077 aa7.47□□□□□ -1.21
CSI1YMR025W GLO3P38682 493 aaKnown RBP7.46□□□□□ -1.22
CSI1YMR025W KAR5Q04746 504 aa7.46□□□□□ -1.22
CSI1YMR025W FAR11P53917 953 aa7.45□□□□□ -1.22
CSI1YMR025W GIC2Q06648 383 aa7.45□□□□□ -1.22
CSI1YMR025W QDR1P40475 563 aa7.44□□□□□ -1.22
CSI1YMR025W RPL34AP87262 121 aaPredicted RBP7.43□□□□□ -1.22
CSI1YMR025W YMR074CQ04773 145 aa7.43□□□□□ -1.22
CSI1YMR025W COBP00163 385 aa7.42□□□□□ -1.22
CSI1YMR025W UFD2P54860 961 aa7.41□□□□□ -1.22
CSI1YMR025W RSC4Q02206 625 aa7.41□□□□□ -1.22
CSI1YMR025W YOR223WQ12015 292 aa7.41□□□□□ -1.22
CSI1YMR025W SEA4P38164 1038 aa7.4□□□□□ -1.22
CSI1YMR025W SDH1Q00711 640 aa7.4□□□□□ -1.22
CSI1YMR025W NPR1P22211 790 aa7.38□□□□□ -1.23
CSI1YMR025W DUR3P33413 735 aa7.38□□□□□ -1.23
CSI1YMR025W GPT2P36148 743 aa7.38□□□□□ -1.23
CSI1YMR025W RIM11P38615 370 aa7.38□□□□□ -1.23
CSI1YMR025W ATG1P53104 897 aa7.38□□□□□ -1.23
CSI1YMR025W CMR1Q12510 522 aaKnown RBP7.38□□□□□ -1.23
CSI1YMR025W GCD1P09032 578 aaPredicted RBP7.37□□□□□ -1.23
CSI1YMR025W ECM2P38241 364 aaKnown RBP7.37□□□□□ -1.23
CSI1YMR025W AOS1Q06624 347 aa7.37□□□□□ -1.23
CSI1YMR025W MMM1P41800 426 aa7.36□□□□□ -1.23
CSI1YMR025W ELM1P32801 640 aa7.35□□□□□ -1.23
CSI1YMR025W WHI3P34761 661 aaKnown RBP7.35□□□□□ -1.23
CSI1YMR025W GCV1P48015 400 aa7.35□□□□□ -1.23
CSI1YMR025W DOT1Q04089 582 aaKnown RBP7.35□□□□□ -1.23
CSI1YMR025W YIG1Q08956 461 aa7.35□□□□□ -1.23
CSI1YMR025W YLL054CQ12244 843 aa7.35□□□□□ -1.23
CSI1YMR025W HTS1P07263 546 aaKnown RBP7.34□□□□□ -1.23
CSI1YMR025W ACF4P47129 309 aa7.34□□□□□ -1.23
CSI1YMR025W TRS120Q04183 1289 aa7.34□□□□□ -1.23
CSI1YMR025W PRP5P21372 849 aaPredicted RBP7.33□□□□□ -1.24
CSI1YMR025W CIT3P43635 486 aa7.33□□□□□ -1.24
CSI1YMR025W YNL011CP53980 444 aa7.33□□□□□ -1.24
CSI1YMR025W MNL2Q12205 849 aa7.33□□□□□ -1.24
CSI1YMR025W MSH6Q03834 1242 aa7.32□□□□□ -1.24
CSI1YMR025W LRG1P35688 1017 aa7.31□□□□□ -1.24
CSI1YMR025W YHL008CP38750 627 aa7.3□□□□□ -1.24
CSI1YMR025W MEC3Q02574 474 aa7.3□□□□□ -1.24
CSI1YMR025W BSC2Q05611 235 aa7.3□□□□□ -1.24
CSI1YMR025W TRL1P09880 827 aaKnown RBP7.29□□□□□ -1.24
CSI1YMR025W RCM1P53972 490 aa7.29□□□□□ -1.24
CSI1YMR025W CDC55Q00362 526 aa7.29□□□□□ -1.24
CSI1YMR025W NSI1Q12457 570 aa7.29□□□□□ -1.24
CSI1YMR025W FLP1P03870 423 aa7.28□□□□□ -1.24
CSI1YMR025W SSA1P10591 642 aaKnown RBP7.28□□□□□ -1.24
CSI1YMR025W RNQ1P25367 405 aa7.28□□□□□ -1.24
CSI1YMR025W POL12P38121 705 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms