RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C YML020WQ03722 664 aa6.59□□□□□ -1.35
USB1YLR132C SMC1P32908 1225 aa6.58□□□□□ -1.36
USB1YLR132C PGM1P33401 570 aaKnown RBP6.58□□□□□ -1.36
USB1YLR132C ARI1P53111 347 aaKnown RBP6.58□□□□□ -1.36
USB1YLR132C NRD1P53617 575 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
USB1YLR132C FUS1P11710 512 aa6.57□□□□□ -1.36
USB1YLR132C IRS4P36115 615 aaKnown RBP6.57□□□□□ -1.36
USB1YLR132C PSY2P40164 858 aa6.57□□□□□ -1.36
USB1YLR132C SOG2Q08817 791 aa6.57□□□□□ -1.36
USB1YLR132C TY1A-NL1Q12391 440 aaKnown RBP6.57□□□□□ -1.36
USB1YLR132C KAR5Q04746 504 aa6.56□□□□□ -1.36
USB1YLR132C HAT1Q12341 374 aa6.56□□□□□ -1.36
USB1YLR132C GLO3P38682 493 aaKnown RBP6.55□□□□□ -1.36
USB1YLR132C PAN5P38787 379 aa6.55□□□□□ -1.36
USB1YLR132C GUP1P53154 560 aa6.55□□□□□ -1.36
USB1YLR132C DSE4P53753 1117 aa6.54□□□□□ -1.36
USB1YLR132C RSC6P25632 483 aa6.53□□□□□ -1.36
USB1YLR132C QDR1P40475 563 aa6.53□□□□□ -1.36
USB1YLR132C PYC2P32327 1180 aaKnown RBP6.52□□□□□ -1.37
USB1YLR132C HVG1P0CE11 249 aa6.51□□□□□ -1.37
USB1YLR132C LEM3P42838 414 aa6.51□□□□□ -1.37
USB1YLR132C ATG1P53104 897 aa6.51□□□□□ -1.37
USB1YLR132C YNR065CP53751 1116 aa6.51□□□□□ -1.37
USB1YLR132C NOP8Q08287 484 aaPredicted RBP6.51□□□□□ -1.37
USB1YLR132C SSF1P38789 453 aaPredicted RBP6.5□□□□□ -1.37
USB1YLR132C POL5P39985 1022 aaKnown RBP6.5□□□□□ -1.37
USB1YLR132C YJR124CP47159 448 aa6.5□□□□□ -1.37
USB1YLR132C ALO1P54783 526 aaKnown RBP6.5□□□□□ -1.37
USB1YLR132C CTR9P89105 1077 aa6.5□□□□□ -1.37
USB1YLR132C GLO4Q12320 285 aa6.5□□□□□ -1.37
USB1YLR132C COQ2P32378 372 aa6.49□□□□□ -1.37
USB1YLR132C UFD2P54860 961 aa6.49□□□□□ -1.37
USB1YLR132C DNA2P38859 1522 aa6.49□□□□□ -1.37
USB1YLR132C STM1P39015 273 aaKnown RBP6.48□□□□□ -1.37
USB1YLR132C NEO1P40527 1151 aa6.48□□□□□ -1.37
USB1YLR132C SPO71Q03868 1245 aa6.48□□□□□ -1.37
USB1YLR132C REC8Q12188 680 aa6.48□□□□□ -1.37
USB1YLR132C YLR122CQ12312 125 aa6.48□□□□□ -1.37
USB1YLR132C COBP00163 385 aa6.47□□□□□ -1.37
USB1YLR132C MAC1P35192 417 aa6.47□□□□□ -1.37
USB1YLR132C RSC4Q02206 625 aa6.47□□□□□ -1.37
USB1YLR132C HAS1Q03532 505 aaKnown RBP6.47□□□□□ -1.37
USB1YLR132C YBL113CQ7M4S9 792 aa6.47□□□□□ -1.37
USB1YLR132C MAE1P36013 669 aaKnown RBP6.46□□□□□ -1.38
USB1YLR132C SAF1P38352 637 aa6.46□□□□□ -1.38
USB1YLR132C AKR1P39010 764 aa6.46□□□□□ -1.38
USB1YLR132C ACF4P47129 309 aa6.46□□□□□ -1.38
USB1YLR132C INP52P50942 1183 aa6.46□□□□□ -1.38
USB1YLR132C ELG1Q12050 791 aa6.46□□□□□ -1.38
USB1YLR132C TRL1P09880 827 aaKnown RBP6.45□□□□□ -1.38
USB1YLR132C ERS1P17261 260 aa6.45□□□□□ -1.38
USB1YLR132C NAM7P30771 971 aaKnown RBP6.45□□□□□ -1.38
USB1YLR132C KAE1P36132 386 aa6.45□□□□□ -1.38
USB1YLR132C OMA1P36163 345 aa6.45□□□□□ -1.38
USB1YLR132C FET4P40988 552 aa6.45□□□□□ -1.38
USB1YLR132C NCE103P53615 221 aa6.45□□□□□ -1.38
USB1YLR132C TRS120Q04183 1289 aa6.45□□□□□ -1.38
USB1YLR132C TRP3P00937 484 aa6.44□□□□□ -1.38
USB1YLR132C YKR073CP36153 106 aa6.44□□□□□ -1.38
USB1YLR132C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38 RIP-Chip
USB1YLR132C MNL2Q12205 849 aa6.44□□□□□ -1.38
USB1YLR132C SEC20P28791 383 aa6.43□□□□□ -1.38
USB1YLR132C SWR1Q05471 1514 aa6.42□□□□□ -1.38
USB1YLR132C GRS1P38088 690 aaKnown RBP6.42□□□□□ -1.38
USB1YLR132C ERP5P38819 212 aa6.42□□□□□ -1.38
USB1YLR132C MED7Q08278 222 aa6.42□□□□□ -1.38
USB1YLR132C HEM3P28789 327 aa6.41□□□□□ -1.38
USB1YLR132C DUR3P33413 735 aa6.41□□□□□ -1.38
USB1YLR132C KIP3P53086 805 aaKnown RBP6.41□□□□□ -1.38
USB1YLR132C YNL011CP53980 444 aa6.41□□□□□ -1.38
USB1YLR132C GLT1Q12680 2145 aaKnown RBP6.41□□□□□ -1.38
USB1YLR132C CHS2P14180 963 aa6.4□□□□□ -1.38
USB1YLR132C RIM11P38615 370 aa6.4□□□□□ -1.38
USB1YLR132C MDJ2P42834 146 aa6.4□□□□□ -1.38
USB1YLR132C YGR130CP53278 816 aa6.4□□□□□ -1.38
USB1YLR132C CMR1Q12510 522 aaKnown RBP6.4□□□□□ -1.38
USB1YLR132C NPR1P22211 790 aa6.39□□□□□ -1.39
USB1YLR132C CDC55Q00362 526 aa6.39□□□□□ -1.39
USB1YLR132C TOS1P38288 455 aa6.38□□□□□ -1.39
USB1YLR132C MSH6Q03834 1242 aa6.38□□□□□ -1.39
USB1YLR132C BSC2Q05611 235 aa6.38□□□□□ -1.39
USB1YLR132C KOG1P38873 1557 aa6.38□□□□□ -1.39
USB1YLR132C ECM2P38241 364 aaKnown RBP6.37□□□□□ -1.39
USB1YLR132C YHL050CP38721 697 aa6.37□□□□□ -1.39
USB1YLR132C YHR219WP38900 624 aa6.37□□□□□ -1.39
USB1YLR132C FAR11P53917 953 aa6.37□□□□□ -1.39
USB1YLR132C MSC6Q08818 692 aaKnown RBP6.37□□□□□ -1.39
USB1YLR132C FRT1Q99332 602 aa6.37□□□□□ -1.39
USB1YLR132C FLP1P03870 423 aa6.36□□□□□ -1.39
USB1YLR132C PRP5P21372 849 aaPredicted RBP6.36□□□□□ -1.39
USB1YLR132C ASF1P32447 279 aa6.36□□□□□ -1.39
USB1YLR132C SEN54Q02825 467 aaPredicted RBP6.36□□□□□ -1.39
USB1YLR132C NUT2Q06213 157 aa6.36□□□□□ -1.39
USB1YLR132C GPI13Q07830 1017 aa6.36□□□□□ -1.39
USB1YLR132C HTS1P07263 546 aaKnown RBP6.35□□□□□ -1.39
USB1YLR132C YHL008CP38750 627 aa6.35□□□□□ -1.39
USB1YLR132C SPO74P45819 413 aa6.35□□□□□ -1.39
USB1YLR132C CTH1P47976 325 aa6.35□□□□□ -1.39
USB1YLR132C YMR074CQ04773 145 aa6.35□□□□□ -1.39
USB1YLR132C YIG1Q08956 461 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms