RNA–Protein interactions for RNA: YLR104W

LCL2, Transcript of Putative protein of unknown function, yeast

Gene LCL2, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL2	YLR104W	YDJ1	P25491	409 aa	Known RBP	4.3	□□□□□ -1.72
LCL2	YLR104W	IRE1	P32361	1115 aa		4.3	□□□□□ -1.72
LCL2	YLR104W	LIP5	P32875	414 aa		4.3	□□□□□ -1.72
LCL2	YLR104W	GAS5	Q08193	484 aa		4.3	□□□□□ -1.72
LCL2	YLR104W	AI3	P03877	415 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	CPS1	P27614	576 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	MED7	Q08278	222 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	TY1B-DR3	Q99231	1755 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	SNT2	P53127	1403 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	SMC4	Q12267	1418 aa		4.29	□□□□□ -1.72
LCL2	YLR104W	PDC6	P26263	563 aa	Known RBP	4.28	□□□□□ -1.72
LCL2	YLR104W	UBP5	P39944	805 aa		4.28	□□□□□ -1.72
LCL2	YLR104W	LYS4	P49367	693 aa	Predicted RBP	4.28	□□□□□ -1.72
LCL2	YLR104W	YRF1-2	P40105	1681 aa		4.27	□□□□□ -1.73
LCL2	YLR104W	RTG2	P32608	588 aa	Known RBP	4.27	□□□□□ -1.73
LCL2	YLR104W	PGM2	P37012	569 aa	Known RBP	4.27	□□□□□ -1.73
LCL2	YLR104W	TOS1	P38288	455 aa		4.27	□□□□□ -1.73
LCL2	YLR104W	RPL34B	P40525	121 aa	Known RBP	4.27	□□□□□ -1.73
LCL2	YLR104W	NHA1	Q99271	985 aa		4.27	□□□□□ -1.73
LCL2	YLR104W	MLP2	P40457	1679 aa		4.26	□□□□□ -1.73
LCL2	YLR104W	DAT1	P13483	248 aa	Known RBP	4.26	□□□□□ -1.73
LCL2	YLR104W	GUT2	P32191	649 aa		4.26	□□□□□ -1.73
LCL2	YLR104W	ISF1	P32488	338 aa		4.26	□□□□□ -1.73
LCL2	YLR104W	ENO2	P00925	437 aa	Known RBP	4.25	□□□□□ -1.73
LCL2	YLR104W	SPT2	P06843	333 aa	Predicted RBP	4.25	□□□□□ -1.73
LCL2	YLR104W	RNQ1	P25367	405 aa		4.25	□□□□□ -1.73
LCL2	YLR104W	ALA1	P40825	983 aa	Known RBP	4.25	□□□□□ -1.73
LCL2	YLR104W	RPN11	P43588	306 aa	Known RBP	4.25	□□□□□ -1.73
LCL2	YLR104W	PDR5	P33302	1511 aa	Known RBP	4.25	□□□□□ -1.73
LCL2	YLR104W	POL1	P13382	1468 aa		4.24	□□□□□ -1.73
LCL2	YLR104W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
LCL2	YLR104W	UTR2	P32623	467 aa		4.24	□□□□□ -1.73
LCL2	YLR104W	ALG14	P38242	237 aa		4.24	□□□□□ -1.73
LCL2	YLR104W	SUM1	P46676	1062 aa		4.24	□□□□□ -1.73
LCL2	YLR104W	SQS1	P53866	767 aa	Known RBP	4.24	□□□□□ -1.73
LCL2	YLR104W	IML1	P47170	1584 aa		4.23	□□□□□ -1.73
LCL2	YLR104W	SSN2	P38931	1420 aa		4.23	□□□□□ -1.73
LCL2	YLR104W	ENO1	P00924	437 aa	Known RBP	4.23	□□□□□ -1.73
LCL2	YLR104W	SUB2	Q07478	446 aa	Known RBP	4.23	□□□□□ -1.73
LCL2	YLR104W	YLR122C	Q12312	125 aa		4.23	□□□□□ -1.73
LCL2	YLR104W	YLR278C	Q05854	1341 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	TSC11	P40061	1430 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	SAC7	P17121	654 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	YCR015C	P25616	317 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	TTI1	P36097	1038 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	KTR7	P40504	517 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	YML083C	Q04526	418 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	BRE4	Q07660	1125 aa		4.22	□□□□□ -1.73
LCL2	YLR104W	NUP157	P40064	1391 aa	Known RBP	4.22	□□□□□ -1.73
LCL2	YLR104W	RPS31	P05759	152 aa	Known RBP	4.21	□□□□□ -1.74
LCL2	YLR104W	SUP45	P12385	437 aa	Known RBP	4.21	□□□□□ -1.74
LCL2	YLR104W	KAE1	P36132	386 aa		4.21	□□□□□ -1.74
LCL2	YLR104W	ARI1	P53111	347 aa	Known RBP	4.21	□□□□□ -1.74
LCL2	YLR104W	ISR1	Q06098	443 aa	Known RBP	4.21	□□□□□ -1.74
LCL2	YLR104W	MAK16	P10962	306 aa	Predicted RBP	4.2	□□□□□ -1.74
LCL2	YLR104W	NOB1	Q08444	459 aa	Known RBP	4.2	□□□□□ -1.74
LCL2	YLR104W	VMR1	P38735	1592 aa		4.19	□□□□□ -1.74
LCL2	YLR104W	COQ2	P32378	372 aa		4.19	□□□□□ -1.74
LCL2	YLR104W	YKL222C	P35995	705 aa		4.19	□□□□□ -1.74
LCL2	YLR104W	NAR1	P23503	491 aa	Known RBP	4.18	□□□□□ -1.74
LCL2	YLR104W	RDS2	P19541	446 aa	Known RBP	4.17	□□□□□ -1.74
LCL2	YLR104W	CSE4	P36012	229 aa		4.17	□□□□□ -1.74
LCL2	YLR104W	RRM3	P38766	723 aa		4.17	□□□□□ -1.74
LCL2	YLR104W	EMP47	P43555	445 aa		4.17	□□□□□ -1.74
LCL2	YLR104W	STE20	Q03497	939 aa	Known RBP	4.17	□□□□□ -1.74
LCL2	YLR104W	MRX10	Q05648	414 aa		4.17	□□□□□ -1.74
LCL2	YLR104W	MAG2	Q06436	670 aa	Known RBP	4.17	□□□□□ -1.74
LCL2	YLR104W	LEU1	P07264	779 aa	Known RBP	4.16	□□□□□ -1.74
LCL2	YLR104W	TBS1	P38114	1094 aa		4.16	□□□□□ -1.74
LCL2	YLR104W	KTR4	P38131	464 aa		4.16	□□□□□ -1.74
LCL2	YLR104W	HAL5	P38970	855 aa	Known RBP	4.16	□□□□□ -1.74
LCL2	YLR104W	RIM21	P48565	533 aa		4.16	□□□□□ -1.74
LCL2	YLR104W	GIS4	Q04233	774 aa		4.16	□□□□□ -1.74
LCL2	YLR104W	MCM16	Q12262	181 aa		4.16	□□□□□ -1.74
LCL2	YLR104W	TOR2	P32600	2474 aa	Known RBP	4.15	□□□□□ -1.74
LCL2	YLR104W	EAF6	P47128	113 aa		4.15	□□□□□ -1.75
LCL2	YLR104W	YGR130C	P53278	816 aa		4.15	□□□□□ -1.75
LCL2	YLR104W	SRB8	P25648	1427 aa		4.14	□□□□□ -1.75
LCL2	YLR104W	PUP1	P25043	261 aa		4.14	□□□□□ -1.75
LCL2	YLR104W	NGR1	P32831	672 aa	Known RBP	4.14	□□□□□ -1.75
LCL2	YLR104W	ECM23	Q02710	187 aa		4.14	□□□□□ -1.75
LCL2	YLR104W	VTH1	P40438	1549 aa		4.14	□□□□□ -1.75
LCL2	YLR104W	VTH2	P40890	1549 aa		4.14	□□□□□ -1.75
LCL2	YLR104W	GCN1	P33892	2672 aa	Known RBP	4.13	□□□□□ -1.75
LCL2	YLR104W	TGL4	P36165	910 aa		4.13	□□□□□ -1.75
LCL2	YLR104W	SLX8	P40072	274 aa		4.13	□□□□□ -1.75
LCL2	YLR104W	PRK1	P40494	810 aa		4.13	□□□□□ -1.75
LCL2	YLR104W	APL6	P46682	809 aa		4.13	□□□□□ -1.75
LCL2	YLR104W	FBP1	P09201	348 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	SFA1	P32771	386 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	GEF1	P37020	779 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	NPR2	P39923	615 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	YML020W	Q03722	664 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	FAB1	P34756	2278 aa		4.12	□□□□□ -1.75
LCL2	YLR104W	NUP188	P52593	1655 aa	Known RBP	4.11	□□□□□ -1.75
LCL2	YLR104W	RGP1	P16664	663 aa		4.11	□□□□□ -1.75
LCL2	YLR104W	SEA4	P38164	1038 aa		4.11	□□□□□ -1.75
LCL2	YLR104W	SOH1	P38633	127 aa		4.11	□□□□□ -1.75
LCL2	YLR104W	NCS6	P53088	359 aa		4.11	□□□□□ -1.75
LCL2	YLR104W	SPT5	P27692	1063 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms