RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W NOC2P39744 710 aaKnown RBP8.64□□□□□ -1.03
TPO1YLL028W NPR2P39923 615 aa8.64□□□□□ -1.03
TPO1YLL028W TPM2P40414 161 aa8.64□□□□□ -1.03
TPO1YLL028W CTH1P47976 325 aa8.64□□□□□ -1.03
TPO1YLL028W INM2Q05533 292 aa8.64□□□□□ -1.03
TPO1YLL028W DCS2Q12123 353 aa8.64□□□□□ -1.03
TPO1YLL028W MSB4Q12317 492 aa8.64□□□□□ -1.03
TPO1YLL028W CDC6P09119 513 aa8.63□□□□□ -1.03
TPO1YLL028W MGM1P32266 881 aa8.63□□□□□ -1.03
TPO1YLL028W PFK2P16862 959 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
TPO1YLL028W CRG1P38892 291 aaRIP-Chip data8.63□□□□□ -1.03not detected
TPO1YLL028W IRC8P47046 822 aa8.63□□□□□ -1.03
TPO1YLL028W STR2P47164 639 aa8.63□□□□□ -1.03
TPO1YLL028W EST2Q06163 884 aa8.63□□□□□ -1.03
TPO1YLL028W SPN1Q06505 410 aaPredicted RBP8.63□□□□□ -1.03
TPO1YLL028W SSF2Q12153 453 aaPredicted RBP8.63□□□□□ -1.03
TPO1YLL028W RGP1P16664 663 aa8.62□□□□□ -1.03
TPO1YLL028W URA1P28272 314 aaPredicted RBP8.62□□□□□ -1.03
TPO1YLL028W RPT3P33298 428 aaKnown RBP8.62□□□□□ -1.03
TPO1YLL028W UBP10P53874 792 aaPredicted RBP8.62□□□□□ -1.03
TPO1YLL028W SRC1Q03707 834 aa8.62□□□□□ -1.03
TPO1YLL028W LAM6Q08001 693 aa8.62□□□□□ -1.03
TPO1YLL028W TMA16Q08687 178 aa8.62□□□□□ -1.03
TPO1YLL028W APL4Q12028 832 aa8.62□□□□□ -1.03
TPO1YLL028W QCR6P00127 147 aa8.61□□□□□ -1.03
TPO1YLL028W PGI1P12709 554 aaKnown RBP8.61□□□□□ -1.03
TPO1YLL028W SWI4P25302 1093 aaKnown RBP8.61□□□□□ -1.03
TPO1YLL028W RPN1P38764 993 aaKnown RBP8.61□□□□□ -1.03
TPO1YLL028W SPL2P38839 148 aa8.61□□□□□ -1.03
TPO1YLL028W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
TPO1YLL028W HXK1P04806 485 aaKnown RBP8.61□□□□□ -1.03
TPO1YLL028W PIF1P07271 859 aa8.61□□□□□ -1.03
TPO1YLL028W YKT6P36015 200 aaKnown RBP8.6□□□□□ -1.03
TPO1YLL028W YHL050CP38721 697 aa8.6□□□□□ -1.03
TPO1YLL028W OSW7P43611 510 aa8.6□□□□□ -1.03
TPO1YLL028W TFC6Q06339 672 aa8.6□□□□□ -1.03
TPO1YLL028W CAF20P12962 161 aaKnown RBP8.59□□□□□ -1.03
TPO1YLL028W CBP3P21560 335 aa8.59□□□□□ -1.03
TPO1YLL028W CDC15P27636 974 aa8.59□□□□□ -1.03
TPO1YLL028W PCH2P38126 564 aa8.59□□□□□ -1.03
TPO1YLL028W ICP55P40051 511 aa8.59□□□□□ -1.03
TPO1YLL028W FLO1P32768 1537 aa8.59□□□□□ -1.03
TPO1YLL028W MYO1P08964 1928 aa8.59□□□□□ -1.03
TPO1YLL028W CSM2P40465 213 aa8.58□□□□□ -1.04
TPO1YLL028W UFD2P54860 961 aa8.58□□□□□ -1.04
TPO1YLL028W RPS15Q01855 142 aaKnown RBP8.58□□□□□ -1.04
TPO1YLL028W SFI1Q12369 946 aa8.58□□□□□ -1.04
TPO1YLL028W PTC5Q12511 572 aa8.58□□□□□ -1.04
TPO1YLL028W MPH3P0CE00 602 aa8.58□□□□□ -1.04
TPO1YLL028W PRP40P33203 583 aaKnown RBP8.58□□□□□ -1.04
TPO1YLL028W YFR006WP43590 535 aa8.58□□□□□ -1.04
TPO1YLL028W RPT4P53549 437 aaKnown RBP8.58□□□□□ -1.04
TPO1YLL028W RIX7Q07844 837 aaKnown RBP8.58□□□□□ -1.04
TPO1YLL028W GET3Q12154 354 aaKnown RBP8.58□□□□□ -1.04
TPO1YLL028W RTT107P38850 1070 aa8.57□□□□□ -1.04
TPO1YLL028W YIL055CP40523 627 aaKnown RBP8.57□□□□□ -1.04
TPO1YLL028W CEP3P40969 608 aa8.57□□□□□ -1.04
TPO1YLL028W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04 RIP-Chip
TPO1YLL028W AFT2Q08957 416 aa8.57□□□□□ -1.04
TPO1YLL028W GSC2P40989 1895 aa8.57□□□□□ -1.04
TPO1YLL028W ENP2P48234 707 aaKnown RBP8.56□□□□□ -1.04
TPO1YLL028W IRC4Q03036 179 aa8.56□□□□□ -1.04
TPO1YLL028W DPH6Q12429 685 aa8.56□□□□□ -1.04
TPO1YLL028W LCB1P25045 558 aaKnown RBP8.56□□□□□ -1.04
TPO1YLL028W ANP1P32629 500 aa8.56□□□□□ -1.04
TPO1YLL028W PTK1P36002 662 aaPredicted RBP8.56□□□□□ -1.04
TPO1YLL028W PXL1P36166 706 aa8.56□□□□□ -1.04
TPO1YLL028W RRP8P38961 392 aaKnown RBP8.56□□□□□ -1.04
TPO1YLL028W MSH4P40965 878 aaPredicted RBP8.56□□□□□ -1.04
TPO1YLL028W IOC3P43596 787 aa8.56□□□□□ -1.04
TPO1YLL028W ALD2P47771 506 aa8.56□□□□□ -1.04
TPO1YLL028W RAT1Q02792 1006 aaKnown RBP8.56□□□□□ -1.04
TPO1YLL028W YOR111WQ99210 232 aa8.56□□□□□ -1.04
TPO1YLL028W PDC1P06169 563 aaKnown RBP8.55□□□□□ -1.04
TPO1YLL028W PRO3P32263 286 aaKnown RBP8.55□□□□□ -1.04
TPO1YLL028W BMH2P34730 273 aaKnown RBP8.55□□□□□ -1.04
TPO1YLL028W MYO3P36006 1272 aa8.55□□□□□ -1.04
TPO1YLL028W PCI8P40512 444 aa8.55□□□□□ -1.04
TPO1YLL028W NSG2P53898 299 aa8.55□□□□□ -1.04
TPO1YLL028W COG4Q06096 861 aa8.55□□□□□ -1.04
TPO1YLL028W TOS4Q06266 489 aa8.55□□□□□ -1.04
TPO1YLL028W SHM1P37292 490 aaPredicted RBP8.54□□□□□ -1.04
TPO1YLL028W LYS14P40971 790 aa8.54□□□□□ -1.04
TPO1YLL028W LYS4P49367 693 aaPredicted RBP8.54□□□□□ -1.04
TPO1YLL028W CUE3P53137 624 aaKnown RBP8.54□□□□□ -1.04
TPO1YLL028W VPS75P53853 264 aa8.54□□□□□ -1.04
TPO1YLL028W CSC1Q06538 782 aa8.54□□□□□ -1.04
TPO1YLL028W RRP43P25359 394 aaPredicted RBP8.53□□□□□ -1.04
TPO1YLL028W LTV1P34078 463 aa8.53□□□□□ -1.04
TPO1YLL028W YGR130CP53278 816 aa8.53□□□□□ -1.04
TPO1YLL028W LSC2P53312 427 aa8.53□□□□□ -1.04
TPO1YLL028W CYB2P00175 591 aa8.53□□□□□ -1.04
TPO1YLL028W PET123P17558 318 aa8.53□□□□□ -1.04
TPO1YLL028W SAC6P32599 642 aaKnown RBP8.53□□□□□ -1.04
TPO1YLL028W FRD1P32614 470 aaKnown RBP8.53□□□□□ -1.04
TPO1YLL028W BOI1P38041 980 aaKnown RBP8.53□□□□□ -1.04
TPO1YLL028W RXT2P38255 430 aa8.53□□□□□ -1.04
TPO1YLL028W YJL181WP46987 611 aa8.53□□□□□ -1.04
TPO1YLL028W PRP31P49704 494 aaPredicted RBP8.53□□□□□ -1.04
TPO1YLL028W SYF1Q04048 859 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms