RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C NCS6P53088 359 aa12.06□□□□□ -0.48
YSR3YKR053C KAR5Q04746 504 aa12.06□□□□□ -0.48
YSR3YKR053C KEL3Q08979 651 aaPredicted RBP12.06□□□□□ -0.48
YSR3YKR053C TOM1Q03280 3268 aa12.05□□□□□ -0.48
YSR3YKR053C FPR3P38911 411 aaKnown RBP12.05□□□□□ -0.48
YSR3YKR053C MRPS35P53292 345 aa12.05□□□□□ -0.48
YSR3YKR053C PEX29Q03370 554 aa12.05□□□□□ -0.48
YSR3YKR053C ECM16Q04217 1267 aaKnown RBP12.05□□□□□ -0.48
YSR3YKR053C TUB2P02557 457 aaKnown RBP12.04□□□□□ -0.48
YSR3YKR053C MPH3P0CE00 602 aa12.04□□□□□ -0.48
YSR3YKR053C BBC1P47068 1157 aa12.04□□□□□ -0.48
YSR3YKR053C PIB2P53191 635 aa12.04□□□□□ -0.48
YSR3YKR053C YPL260WQ08977 551 aa12.04□□□□□ -0.48
YSR3YKR053C ASH1P34233 588 aa12.03□□□□□ -0.48
YSR3YKR053C OCT1P35999 772 aa12.03□□□□□ -0.48
YSR3YKR053C JIP4Q03361 876 aa12.03□□□□□ -0.48
YSR3YKR053C YDL124WQ07551 312 aaKnown RBP12.03□□□□□ -0.48
YSR3YKR053C KTR1P27810 393 aaKnown RBP12.02□□□□□ -0.49
YSR3YKR053C ACA1P39970 489 aa12.02□□□□□ -0.49
YSR3YKR053C SPR3P41901 512 aa12.02□□□□□ -0.49
YSR3YKR053C NET1P47035 1189 aa12.02□□□□□ -0.49
YSR3YKR053C PKH3Q03306 898 aaPredicted RBP12.02□□□□□ -0.49
YSR3YKR053C RMD1Q03441 430 aa12.02□□□□□ -0.49
YSR3YKR053C TAH18Q12181 623 aa12.02□□□□□ -0.49
YSR3YKR053C CST26P38226 397 aa12.01□□□□□ -0.49
YSR3YKR053C NKP2Q06162 153 aa12.01□□□□□ -0.49
YSR3YKR053C OPI1P21957 404 aa12□□□□□ -0.49
YSR3YKR053C PRE8P23639 250 aa12□□□□□ -0.49
YSR3YKR053C RTS1P38903 757 aa11.99□□□□□ -0.49
YSR3YKR053C YLR225CQ05948 407 aaKnown RBP11.99□□□□□ -0.49
YSR3YKR053C SUB2Q07478 446 aaKnown RBP11.99□□□□□ -0.49
YSR3YKR053C LAM4P38800 1345 aa11.99□□□□□ -0.49
YSR3YKR053C SRM1P21827 482 aa11.98□□□□□ -0.49
YSR3YKR053C LYS14P40971 790 aa11.98□□□□□ -0.49
YSR3YKR053C RAD50P12753 1312 aa11.97□□□□□ -0.49
YSR3YKR053C SPT21P35209 758 aa11.97□□□□□ -0.49
YSR3YKR053C STM1P39015 273 aaKnown RBP11.97□□□□□ -0.49
YSR3YKR053C TIF4631P39935 952 aaKnown RBP11.97□□□□□ -0.49
YSR3YKR053C VAB2P40003 282 aa11.97□□□□□ -0.49
YSR3YKR053C SGD1Q06132 899 aa11.97□□□□□ -0.49
YSR3YKR053C COQ1P18900 473 aa11.96□□□□□ -0.49
YSR3YKR053C MET1P36150 593 aa11.96□□□□□ -0.49
YSR3YKR053C ERG7P38604 731 aa11.96□□□□□ -0.49
YSR3YKR053C YHL050CP38721 697 aa11.96□□□□□ -0.49
YSR3YKR053C SKG3Q06315 1026 aa11.96□□□□□ -0.49
YSR3YKR053C LAP2Q10740 671 aa11.96□□□□□ -0.49
YSR3YKR053C ERG12P07277 443 aa11.95□□□□□ -0.5
YSR3YKR053C YDJ1P25491 409 aaKnown RBP11.95□□□□□ -0.5
YSR3YKR053C RRP8P38961 392 aaKnown RBP11.95□□□□□ -0.5
YSR3YKR053C SLN1P39928 1220 aaPredicted RBP11.95□□□□□ -0.5
YSR3YKR053C MRD1Q06106 887 aaKnown RBP11.95□□□□□ -0.5
YSR3YKR053C RAD61Q99359 647 aa11.95□□□□□ -0.5
YSR3YKR053C SPB4P25808 606 aaPredicted RBP11.94□□□□□ -0.5
YSR3YKR053C IXR1P33417 597 aa11.94□□□□□ -0.5
YSR3YKR053C MCD4P36051 919 aa11.94□□□□□ -0.5
YSR3YKR053C CFT2Q12102 859 aaPredicted RBP11.94□□□□□ -0.5
YSR3YKR053C FBP1P09201 348 aa11.93□□□□□ -0.5
YSR3YKR053C SDH2P21801 266 aa11.93□□□□□ -0.5
YSR3YKR053C PER1P25625 357 aa11.93□□□□□ -0.5
YSR3YKR053C VID27P40157 782 aa11.93□□□□□ -0.5
YSR3YKR053C RIM20Q12033 661 aa11.93□□□□□ -0.5
YSR3YKR053C CDC60P26637 1090 aaKnown RBP11.92□□□□□ -0.5
YSR3YKR053C SSF2Q12153 453 aaPredicted RBP11.92□□□□□ -0.5
YSR3YKR053C TY3A-GQ12173 290 aa11.92□□□□□ -0.5
YSR3YKR053C TY3A-IQ99219 290 aa11.92□□□□□ -0.5
YSR3YKR053C VAS1P07806 1104 aaKnown RBP11.91□□□□□ -0.5
YSR3YKR053C YJL007CP47080 104 aa11.91□□□□□ -0.5
YSR3YKR053C RPS15Q01855 142 aaKnown RBP11.91□□□□□ -0.5
YSR3YKR053C CHO2P05374 869 aaKnown RBP11.9□□□□□ -0.5
YSR3YKR053C KRS1P15180 591 aaKnown RBP11.9□□□□□ -0.5
YSR3YKR053C DIT2P21595 489 aa11.9□□□□□ -0.5
YSR3YKR053C PES4P39684 611 aa11.9□□□□□ -0.5
YSR3YKR053C UFD2P54860 961 aa11.9□□□□□ -0.5
YSR3YKR053C TUS1Q06412 1307 aa11.89□□□□□ -0.51
YSR3YKR053C SKI2P35207 1287 aaKnown RBP RIP-Chip data11.89□□□□□ -0.51not detected
YSR3YKR053C AAP1P37898 856 aaKnown RBP11.89□□□□□ -0.51
YSR3YKR053C VPS8P39702 1274 aa11.89□□□□□ -0.51
YSR3YKR053C YML037CQ03703 340 aa11.89□□□□□ -0.51
YSR3YKR053C UBX5Q06682 500 aa11.89□□□□□ -0.51
YSR3YKR053C GSC2P40989 1895 aa11.89□□□□□ -0.51
YSR3YKR053C CHS3P29465 1165 aa11.88□□□□□ -0.51
YSR3YKR053C ATG1P53104 897 aa11.88□□□□□ -0.51
YSR3YKR053C SOL4P53315 255 aa11.88□□□□□ -0.51
YSR3YKR053C MYO3P36006 1272 aa11.87□□□□□ -0.51
YSR3YKR053C FPR4Q06205 392 aaPredicted RBP11.87□□□□□ -0.51
YSR3YKR053C CRG1P38892 291 aaRIP-Chip data11.86□□□□□ -0.51not detected
YSR3YKR053C SRS2P12954 1174 aa11.85□□□□□ -0.51
YSR3YKR053C TPM1P17536 199 aaKnown RBP11.85□□□□□ -0.51
YSR3YKR053C PKC1P24583 1151 aa11.85□□□□□ -0.51
YSR3YKR053C PRO3P32263 286 aaKnown RBP11.85□□□□□ -0.51
YSR3YKR053C EUG1P32474 517 aa11.84□□□□□ -0.51
YSR3YKR053C ANP1P32629 500 aa11.84□□□□□ -0.51
YSR3YKR053C GPB2P39717 880 aa11.84□□□□□ -0.51
YSR3YKR053C PSF2P40359 213 aa11.84□□□□□ -0.51
YSR3YKR053C SPN1Q06505 410 aaPredicted RBP11.84□□□□□ -0.51
YSR3YKR053C VMA2P16140 517 aaKnown RBP11.83□□□□□ -0.52
YSR3YKR053C SAM2P19358 384 aaKnown RBP11.83□□□□□ -0.52
YSR3YKR053C RIT1P23796 513 aa11.83□□□□□ -0.52
YSR3YKR053C YAF9P53930 226 aa11.83□□□□□ -0.52
YSR3YKR053C PIB1Q06651 286 aa11.83□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms