RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W KAR2P16474 682 aaKnown RBP5.58□□□□□ -1.52
CTK1YKL139W PDC6P26263 563 aaKnown RBP5.58□□□□□ -1.52
CTK1YKL139W SLA1P32790 1244 aa5.58□□□□□ -1.52
CTK1YKL139W ASH1P34233 588 aa5.58□□□□□ -1.52
CTK1YKL139W AIR1P40507 360 aaKnown RBP5.58□□□□□ -1.52
CTK1YKL139W MON1P53129 644 aa5.58□□□□□ -1.52
CTK1YKL139W HST3P53687 447 aa5.58□□□□□ -1.52
CTK1YKL139W ULP1Q02724 621 aa5.58□□□□□ -1.52
CTK1YKL139W YPL109CQ02981 657 aa5.58□□□□□ -1.52
CTK1YKL139W EMG1Q06287 252 aaKnown RBP5.58□□□□□ -1.52
CTK1YKL139W CDC53Q12018 815 aaKnown RBP5.58□□□□□ -1.52
CTK1YKL139W COBP00163 385 aa5.57□□□□□ -1.52
CTK1YKL139W CDC4P07834 779 aa5.57□□□□□ -1.52
CTK1YKL139W CDC34P14682 295 aa5.57□□□□□ -1.52
CTK1YKL139W STI1P15705 589 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
CTK1YKL139W AFT1P22149 690 aa5.57□□□□□ -1.52
CTK1YKL139W ECM2P38241 364 aaKnown RBP5.57□□□□□ -1.52
CTK1YKL139W OSW7P43611 510 aa5.57□□□□□ -1.52
CTK1YKL139W GRX1P25373 110 aaKnown RBP5.56□□□□□ -1.52
CTK1YKL139W CUS1Q02554 436 aaPredicted RBP5.56□□□□□ -1.52
CTK1YKL139W RPN4Q03465 531 aa5.56□□□□□ -1.52
CTK1YKL139W ADI1Q03677 179 aa5.56□□□□□ -1.52
CTK1YKL139W BDF2Q07442 638 aa5.56□□□□□ -1.52
CTK1YKL139W LEU1P07264 779 aaKnown RBP5.55□□□□□ -1.52
CTK1YKL139W PRI2P20457 528 aa5.55□□□□□ -1.52
CTK1YKL139W DAL1P32375 460 aa5.55□□□□□ -1.52
CTK1YKL139W DUT1P33317 147 aa5.55□□□□□ -1.52
CTK1YKL139W DUR3P33413 735 aa5.55□□□□□ -1.52
CTK1YKL139W PIC2P40035 300 aa5.55□□□□□ -1.52
CTK1YKL139W NUT1P53114 1132 aa5.55□□□□□ -1.52
CTK1YKL139W PYC2P32327 1180 aaKnown RBP5.55□□□□□ -1.52
CTK1YKL139W PBP2P38151 413 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
CTK1YKL139W TAT2P38967 592 aa5.55□□□□□ -1.52
CTK1YKL139W YIL165CP40446 119 aa5.55□□□□□ -1.52
CTK1YKL139W PTK2P47116 818 aaKnown RBP5.55□□□□□ -1.52
CTK1YKL139W ALG12P53730 551 aa5.55□□□□□ -1.52
CTK1YKL139W FAR11P53917 953 aa5.55□□□□□ -1.52
CTK1YKL139W YOR131CQ12486 218 aa5.55□□□□□ -1.52
CTK1YKL139W SRF1Q12516 437 aa5.55□□□□□ -1.52
CTK1YKL139W GCR1P07261 785 aa5.54□□□□□ -1.52
CTK1YKL139W BUD6P41697 788 aa5.54□□□□□ -1.52
CTK1YKL139W ITC1P53125 1264 aa5.54□□□□□ -1.52
CTK1YKL139W YGR053CP53234 283 aa5.54□□□□□ -1.52
CTK1YKL139W MSH6Q03834 1242 aa5.54□□□□□ -1.52
CTK1YKL139W OPI10Q08202 246 aa5.54□□□□□ -1.52
CTK1YKL139W RGP1P16664 663 aa5.53□□□□□ -1.52
CTK1YKL139W RVS167P39743 482 aaKnown RBP5.53□□□□□ -1.52
CTK1YKL139W VTC4P47075 721 aa5.53□□□□□ -1.52
CTK1YKL139W SKP1P52286 194 aa5.53□□□□□ -1.52
CTK1YKL139W HUL5P53119 910 aa5.53□□□□□ -1.52
CTK1YKL139W TDA5Q06417 326 aaKnown RBP5.53□□□□□ -1.52
CTK1YKL139W RRP14P36080 434 aaKnown RBP5.52□□□□□ -1.53
CTK1YKL139W YJR098CP47139 656 aa5.52□□□□□ -1.53
CTK1YKL139W RAD4P14736 754 aa5.51□□□□□ -1.53
CTK1YKL139W YKL069WP36088 180 aa5.51□□□□□ -1.53
CTK1YKL139W APM2P38700 605 aa5.51□□□□□ -1.53
CTK1YKL139W SPF1P39986 1215 aaKnown RBP5.51□□□□□ -1.53
CTK1YKL139W YJR115WP47152 169 aa5.51□□□□□ -1.53
CTK1YKL139W YNR040WP53736 256 aa5.51□□□□□ -1.53
CTK1YKL139W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53 RIP-Chip
CTK1YKL139W RTT10Q08924 1013 aa5.51□□□□□ -1.53
CTK1YKL139W SQT1P35184 431 aa5.5□□□□□ -1.53
CTK1YKL139W XKS1P42826 600 aa5.5□□□□□ -1.53
CTK1YKL139W RSM26P47141 266 aa5.5□□□□□ -1.53
CTK1YKL139W NAN1Q02931 896 aaKnown RBP5.5□□□□□ -1.53
CTK1YKL139W PMT7Q06644 662 aa5.5□□□□□ -1.53
CTK1YKL139W MRL1Q06815 381 aa5.5□□□□□ -1.53
CTK1YKL139W FAL1Q12099 399 aaKnown RBP5.5□□□□□ -1.53
CTK1YKL139W FPR3P38911 411 aaKnown RBP5.5□□□□□ -1.53
CTK1YKL139W NUP85P46673 744 aa5.5□□□□□ -1.53
CTK1YKL139W TIM54P47045 478 aa5.5□□□□□ -1.53
CTK1YKL139W LSC2P53312 427 aa5.5□□□□□ -1.53
CTK1YKL139W CCP1P00431 361 aa5.49□□□□□ -1.53
CTK1YKL139W SAP155P43612 1002 aa5.49□□□□□ -1.53
CTK1YKL139W EEB1Q02891 456 aa5.49□□□□□ -1.53
CTK1YKL139W BAS1P22035 811 aa5.48□□□□□ -1.53
CTK1YKL139W RIM11P38615 370 aa5.48□□□□□ -1.53
CTK1YKL139W UBP15P50101 1230 aa5.48□□□□□ -1.53
CTK1YKL139W TMA46Q12000 345 aaKnown RBP5.48□□□□□ -1.53
CTK1YKL139W TCB1Q12466 1186 aa5.48□□□□□ -1.53
CTK1YKL139W CMR1Q12510 522 aaKnown RBP5.48□□□□□ -1.53
CTK1YKL139W RAD27P26793 382 aa5.47□□□□□ -1.53
CTK1YKL139W NCL1P38205 684 aaKnown RBP5.47□□□□□ -1.53
CTK1YKL139W PEX28P38848 579 aa5.47□□□□□ -1.53
CTK1YKL139W GNP1P48813 663 aa5.47□□□□□ -1.53
CTK1YKL139W PPT1P53043 513 aa5.47□□□□□ -1.53
CTK1YKL139W TYW3P53177 273 aa5.47□□□□□ -1.53
CTK1YKL139W PEX13P80667 386 aa5.47□□□□□ -1.53
CTK1YKL139W NPR1P22211 790 aa5.46□□□□□ -1.53
CTK1YKL139W MET22P32179 357 aa5.46□□□□□ -1.53
CTK1YKL139W MRPL16P38064 232 aa5.46□□□□□ -1.53
CTK1YKL139W NUP82P40368 713 aa5.46□□□□□ -1.53
CTK1YKL139W YGL140CP53120 1219 aa5.46□□□□□ -1.53
CTK1YKL139W KRE33P53914 1056 aaKnown RBP5.46□□□□□ -1.53
CTK1YKL139W PPM2Q08282 695 aa5.46□□□□□ -1.53
CTK1YKL139W SEC23P15303 768 aaKnown RBP5.46□□□□□ -1.54
CTK1YKL139W HDA2Q06629 674 aa5.46□□□□□ -1.54
CTK1YKL139W MET6P05694 767 aaKnown RBP5.45□□□□□ -1.54
CTK1YKL139W TIM23P32897 222 aa5.45□□□□□ -1.54
CTK1YKL139W YHR020WP38708 688 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms