RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR040C	YIR040C	RSC2	Q06488	889 aa		4.18	□□□□□ -1.74
YIR040C	YIR040C	SLN1	P39928	1220 aa	Predicted RBP	4.17	□□□□□ -1.74
YIR040C	YIR040C	INP51	P40559	946 aa	Known RBP	4.17	□□□□□ -1.74
YIR040C	YIR040C	UFD2	P54860	961 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	CTR9	P89105	1077 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	VPS72	Q03388	795 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	MTC5	Q03897	1148 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	GPI13	Q07830	1017 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	PLP2	Q12017	286 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	PUS1	Q12211	544 aa	Known RBP	4.17	□□□□□ -1.74
YIR040C	YIR040C	YDR215C	Q12240	137 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	YPR053C	Q6Q5F3	151 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	NHA1	Q99271	985 aa		4.17	□□□□□ -1.74
YIR040C	YIR040C	COB	P00163	385 aa		4.16	□□□□□ -1.74
YIR040C	YIR040C	PYC2	P32327	1180 aa	Known RBP	4.16	□□□□□ -1.74
YIR040C	YIR040C	YBR287W	P38355	427 aa		4.16	□□□□□ -1.74
YIR040C	YIR040C	SOK2	P53438	785 aa	Predicted RBP	4.16	□□□□□ -1.74
YIR040C	YIR040C	BIO5	P53744	561 aa	Known RBP	4.16	□□□□□ -1.74
YIR040C	YIR040C	RSC4	Q02206	625 aa		4.16	□□□□□ -1.74
YIR040C	YIR040C	YMR187C	Q03236	431 aa		4.16	□□□□□ -1.74
YIR040C	YIR040C	DUR3	P33413	735 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	SKN7	P38889	622 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	GIP2	P40036	548 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	TED1	P40533	473 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	PRY1	P47032	299 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	GAS5	Q08193	484 aa		4.15	□□□□□ -1.75
YIR040C	YIR040C	HSP82	P02829	709 aa	Known RBP	4.14	□□□□□ -1.75
YIR040C	YIR040C	FUS1	P11710	512 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	ASF1	P32447	279 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	AMN1	P38285	549 aa	Predicted RBP	4.14	□□□□□ -1.75
YIR040C	YIR040C	YHL050C	P38721	697 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	YHR219W	P38900	624 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	CCT8	P47079	568 aa	Known RBP	4.14	□□□□□ -1.75
YIR040C	YIR040C	BUD9	P53226	547 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	YNL011C	P53980	444 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	SOG2	Q08817	791 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	GLO4	Q12320	285 aa		4.14	□□□□□ -1.75
YIR040C	YIR040C	HVG1	P0CE11	249 aa		4.13	□□□□□ -1.75
YIR040C	YIR040C	RRM3	P38766	723 aa		4.13	□□□□□ -1.75
YIR040C	YIR040C	LSB3	P43603	459 aa	Known RBP	4.13	□□□□□ -1.75
YIR040C	YIR040C	MDG1	P53885	366 aa		4.13	□□□□□ -1.75
YIR040C	YIR040C	GIN4	Q12263	1142 aa		4.13	□□□□□ -1.75
YIR040C	YIR040C	TY4B-P	A0A0B7P3V8	1104 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	RPS0A	P32905	252 aa	Known RBP	4.12	□□□□□ -1.75
YIR040C	YIR040C	YJR124C	P47159	448 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	ORC1	P54784	914 aa	Predicted RBP	4.12	□□□□□ -1.75
YIR040C	YIR040C	CDC55	Q00362	526 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	MCA1	Q08601	432 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	SLP1	Q12232	587 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	TY4A-H	Q6Q5P6	413 aa		4.12	□□□□□ -1.75
YIR040C	YIR040C	PAN5	P38787	379 aa		4.11	□□□□□ -1.75
YIR040C	YIR040C	LSB6	P42951	607 aa		4.11	□□□□□ -1.75
YIR040C	YIR040C	GUP1	P53154	560 aa		4.11	□□□□□ -1.75
YIR040C	YIR040C	YNR065C	P53751	1116 aa		4.11	□□□□□ -1.75
YIR040C	YIR040C	FLP1	P03870	423 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	RIM11	P38615	370 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	BSC2	Q05611	235 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	MSC6	Q08818	692 aa	Known RBP	4.1	□□□□□ -1.75
YIR040C	YIR040C	HIF1	Q12373	385 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	WHI5	Q12416	295 aa		4.1	□□□□□ -1.75
YIR040C	YIR040C	AI3	P03877	415 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	MET4	P32389	672 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	TAT1	P38085	619 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	YHL008C	P38750	627 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	NUG1	P40010	520 aa	Known RBP	4.09	□□□□□ -1.75
YIR040C	YIR040C	NEO1	P40527	1151 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	SEN54	Q02825	467 aa	Predicted RBP	4.09	□□□□□ -1.75
YIR040C	YIR040C	HAS1	Q03532	505 aa	Known RBP	4.09	□□□□□ -1.75
YIR040C	YIR040C	YML020W	Q03722	664 aa		4.09	□□□□□ -1.75
YIR040C	YIR040C	INP54	Q08227	384 aa	Known RBP	4.09	□□□□□ -1.75
YIR040C	YIR040C	CMR1	Q12510	522 aa	Known RBP	4.09	□□□□□ -1.75
YIR040C	YIR040C	PPX1	P38698	397 aa		4.08	□□□□□ -1.76
YIR040C	YIR040C	IPL1	P38991	367 aa		4.08	□□□□□ -1.76
YIR040C	YIR040C	STM1	P39015	273 aa	Known RBP	4.08	□□□□□ -1.76
YIR040C	YIR040C	POL5	P39985	1022 aa	Known RBP	4.08	□□□□□ -1.76
YIR040C	YIR040C	CWC22	P53333	577 aa	Known RBP	4.08	□□□□□ -1.76
YIR040C	YIR040C	MSH6	Q03834	1242 aa		4.08	□□□□□ -1.76
YIR040C	YIR040C	TY1A-NL1	Q12391	440 aa	Known RBP	4.08	□□□□□ -1.76
YIR040C	YIR040C	PHO4	P07270	312 aa	Known RBP	4.07	□□□□□ -1.76
YIR040C	YIR040C	PRP5	P21372	849 aa	Predicted RBP	4.07	□□□□□ -1.76
YIR040C	YIR040C	NPR1	P22211	790 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YIR040C	YIR040C	FET4	P40988	552 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	LEM3	P42838	414 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	NUT1	P53114	1132 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	NOP7	P53261	605 aa	Known RBP	4.07	□□□□□ -1.76
YIR040C	YIR040C	YPL034W	Q03083	165 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	TOS4	Q06266	489 aa		4.07	□□□□□ -1.76
YIR040C	YIR040C	SAC7	P17121	654 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	ERS1	P17261	260 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	SFA1	P32771	386 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	ECM2	P38241	364 aa	Known RBP	4.06	□□□□□ -1.76
YIR040C	YIR040C	ENP1	P38333	483 aa	Known RBP	4.06	□□□□□ -1.76
YIR040C	YIR040C	RIX1	P38883	763 aa	Predicted RBP	4.06	□□□□□ -1.76
YIR040C	YIR040C	SAP155	P43612	1002 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	MON1	P53129	644 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	SPO71	Q03868	1245 aa		4.06	□□□□□ -1.76
YIR040C	YIR040C	NOC3	Q07896	663 aa	Predicted RBP	4.06	□□□□□ -1.76
YIR040C	YIR040C	NOP8	Q08287	484 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms