RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C PEX14P53112 341 aa6.36□□□□□ -1.39
SFB3YHR098C GPA1P08539 472 aa6.36□□□□□ -1.39
SFB3YHR098C ASF1P32447 279 aa6.36□□□□□ -1.39
SFB3YHR098C REI1P38344 393 aaPredicted RBP6.36□□□□□ -1.39
SFB3YHR098C YER130CP39959 443 aa6.36□□□□□ -1.39
SFB3YHR098C SPO19Q03029 223 aa6.36□□□□□ -1.39
SFB3YHR098C DAL7P21826 554 aa6.35□□□□□ -1.39
SFB3YHR098C RNH70P53331 553 aa6.35□□□□□ -1.39
SFB3YHR098C SRT1Q03175 343 aa6.35□□□□□ -1.39
SFB3YHR098C ORM2Q06144 216 aa6.35□□□□□ -1.39
SFB3YHR098C DDP1Q99321 188 aaKnown RBP6.35□□□□□ -1.39
SFB3YHR098C CIT2P08679 460 aa6.35□□□□□ -1.39
SFB3YHR098C UBC1P21734 215 aaKnown RBP6.35□□□□□ -1.39
SFB3YHR098C SIT1P39980 628 aa6.35□□□□□ -1.39
SFB3YHR098C CTF18P49956 741 aa6.35□□□□□ -1.39
SFB3YHR098C UBX2Q04228 584 aa6.35□□□□□ -1.39
SFB3YHR098C RDS1P25611 832 aa6.35□□□□□ -1.39
SFB3YHR098C CDC15P27636 974 aa6.35□□□□□ -1.39
SFB3YHR098C SPT8P38915 602 aa6.35□□□□□ -1.39
SFB3YHR098C YOR223WQ12015 292 aa6.35□□□□□ -1.39
SFB3YHR098C ATG9Q12142 997 aa6.35□□□□□ -1.39
SFB3YHR098C CPA2P03965 1118 aaKnown RBP6.34□□□□□ -1.39
SFB3YHR098C RRP43P25359 394 aaPredicted RBP6.34□□□□□ -1.39
SFB3YHR098C SRP40P32583 406 aaPredicted RBP6.34□□□□□ -1.39
SFB3YHR098C YBR287WP38355 427 aa6.34□□□□□ -1.39
SFB3YHR098C CCT4P39078 528 aaKnown RBP6.34□□□□□ -1.39
SFB3YHR098C APL6P46682 809 aa6.34□□□□□ -1.39
SFB3YHR098C APT1P49435 187 aaKnown RBP6.34□□□□□ -1.39
SFB3YHR098C MRX10Q05648 414 aa6.34□□□□□ -1.39
SFB3YHR098C SWI1P09547 1314 aa6.34□□□□□ -1.39
SFB3YHR098C SUP45P12385 437 aaKnown RBP6.34□□□□□ -1.4
SFB3YHR098C KAR3P17119 729 aa6.34□□□□□ -1.4
SFB3YHR098C RRM3P38766 723 aa6.34□□□□□ -1.4
SFB3YHR098C STR2P47164 639 aa6.34□□□□□ -1.4
SFB3YHR098C TAP42Q04372 366 aa6.34□□□□□ -1.4
SFB3YHR098C YVC1Q12324 675 aa6.34□□□□□ -1.4
SFB3YHR098C RPO41P13433 1351 aaKnown RBP6.34□□□□□ -1.4
SFB3YHR098C RPC82P32349 654 aa6.33□□□□□ -1.4
SFB3YHR098C AIM9P40053 627 aaKnown RBP6.33□□□□□ -1.4
SFB3YHR098C HOS4P40480 1083 aa6.33□□□□□ -1.4
SFB3YHR098C BUD6P41697 788 aa6.33□□□□□ -1.4
SFB3YHR098C GYP7P48365 746 aa6.33□□□□□ -1.4
SFB3YHR098C DSD1P53095 428 aa6.33□□□□□ -1.4
SFB3YHR098C RUD3Q12234 484 aaKnown RBP6.33□□□□□ -1.4
SFB3YHR098C PRP16P15938 1071 aaPredicted RBP6.33□□□□□ -1.4
SFB3YHR098C MUD2P36084 527 aaKnown RBP6.33□□□□□ -1.4
SFB3YHR098C NOC2P39744 710 aaKnown RBP6.33□□□□□ -1.4
SFB3YHR098C CMS1Q07897 291 aaKnown RBP6.33□□□□□ -1.4
SFB3YHR098C RPS19AP07280 144 aaKnown RBP6.32□□□□□ -1.4
SFB3YHR098C RPS19BP07281 144 aaPredicted RBP6.32□□□□□ -1.4
SFB3YHR098C RPO26P20435 155 aa6.32□□□□□ -1.4
SFB3YHR098C PRE10P21242 288 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SFB3YHR098C BBC1P47068 1157 aa6.32□□□□□ -1.4
SFB3YHR098C RMD1Q03441 430 aa6.32□□□□□ -1.4
SFB3YHR098C ARO80Q04052 950 aa6.32□□□□□ -1.4
SFB3YHR098C KRS1P15180 591 aaKnown RBP6.32□□□□□ -1.4
SFB3YHR098C GSY2P27472 705 aa6.32□□□□□ -1.4
SFB3YHR098C UBP14P38237 781 aaKnown RBP6.32□□□□□ -1.4
SFB3YHR098C TAT2P38967 592 aa6.32□□□□□ -1.4
SFB3YHR098C CAB1Q04430 367 aa6.32□□□□□ -1.4
SFB3YHR098C LCB5Q06147 687 aaKnown RBP6.32□□□□□ -1.4
SFB3YHR098C ATG23Q06671 453 aa6.32□□□□□ -1.4
SFB3YHR098C MRPS28P21771 286 aa6.31□□□□□ -1.4
SFB3YHR098C RRP1P35178 278 aaPredicted RBP6.31□□□□□ -1.4
SFB3YHR098C TOM20P35180 183 aa6.31□□□□□ -1.4
SFB3YHR098C SEC9P40357 651 aa6.31□□□□□ -1.4
SFB3YHR098C CSN12P47130 423 aa6.31□□□□□ -1.4
SFB3YHR098C YGR122WP53272 402 aa6.31□□□□□ -1.4
SFB3YHR098C ALD3P54114 506 aa6.31□□□□□ -1.4
SFB3YHR098C YCG1Q06680 1035 aa6.31□□□□□ -1.4
SFB3YHR098C RRP5Q05022 1729 aaKnown RBP6.31□□□□□ -1.4
SFB3YHR098C ARD1P07347 238 aaPredicted RBP6.31□□□□□ -1.4
SFB3YHR098C PDI1P17967 522 aaKnown RBP6.31□□□□□ -1.4
SFB3YHR098C DPB3P27344 201 aa6.31□□□□□ -1.4
SFB3YHR098C GRX4P32642 244 aa6.31□□□□□ -1.4
SFB3YHR098C PSY4P38193 441 aa6.31□□□□□ -1.4
SFB3YHR098C HUL4P40985 892 aa6.31□□□□□ -1.4
SFB3YHR098C CAF130P53280 1122 aaPredicted RBP6.31□□□□□ -1.4
SFB3YHR098C NDL1Q06568 189 aa6.31□□□□□ -1.4
SFB3YHR098C SMC6Q12749 1114 aa6.31□□□□□ -1.4
SFB3YHR098C TY1B-NL2Q99337 1749 aaKnown RBP6.31□□□□□ -1.4
SFB3YHR098C SUP35P05453 685 aaKnown RBP6.3□□□□□ -1.4
SFB3YHR098C NUF2P33895 451 aa6.3□□□□□ -1.4
SFB3YHR098C IAH1P41734 238 aa6.3□□□□□ -1.4
SFB3YHR098C MSC6Q08818 692 aaKnown RBP6.3□□□□□ -1.4
SFB3YHR098C PMR1P13586 950 aa6.3□□□□□ -1.4
SFB3YHR098C AAP1P37898 856 aaKnown RBP6.3□□□□□ -1.4
SFB3YHR098C ERP5P38819 212 aa6.3□□□□□ -1.4
SFB3YHR098C LAM1P38851 1228 aa6.3□□□□□ -1.4
SFB3YHR098C TIF4632P39936 914 aaKnown RBP6.3□□□□□ -1.4
SFB3YHR098C MDJ2P42834 146 aa6.3□□□□□ -1.4
SFB3YHR098C YJR079WP47126 109 aa6.3□□□□□ -1.4
SFB3YHR098C ATF2P53296 535 aa6.3□□□□□ -1.4
SFB3YHR098C PSO2P30620 661 aa6.29□□□□□ -1.4
SFB3YHR098C STO1P34160 861 aaKnown RBP6.29□□□□□ -1.4
SFB3YHR098C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SFB3YHR098C CAJ1P39101 391 aa6.29□□□□□ -1.4
SFB3YHR098C MPH1P40562 993 aa6.29□□□□□ -1.4
SFB3YHR098C RTF1P53064 558 aa6.29□□□□□ -1.4
SFB3YHR098C SEC5P89102 971 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms