RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C REC8Q12188 680 aa8.26□□□□□ -1.09
NEM1YHR004C PUB1P32588 453 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
NEM1YHR004C AVT1P47082 602 aa8.25□□□□□ -1.09
NEM1YHR004C CWC15Q03772 175 aaKnown RBP8.25□□□□□ -1.09
NEM1YHR004C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
NEM1YHR004C MAE1P36013 669 aaKnown RBP8.24□□□□□ -1.09
NEM1YHR004C FUS1P11710 512 aa8.23□□□□□ -1.09
NEM1YHR004C NAM7P30771 971 aaKnown RBP8.23□□□□□ -1.09
NEM1YHR004C SPO71Q03868 1245 aa8.23□□□□□ -1.09
NEM1YHR004C SPO74P45819 413 aa8.22□□□□□ -1.09
NEM1YHR004C PNP1Q05788 311 aa8.22□□□□□ -1.09
NEM1YHR004C BRE4Q07660 1125 aa8.21□□□□□ -1.1
NEM1YHR004C CYC7P00045 113 aa8.2□□□□□ -1.1
NEM1YHR004C POL5P39985 1022 aaKnown RBP8.2□□□□□ -1.1
NEM1YHR004C NTA1P40354 457 aa8.2□□□□□ -1.1
NEM1YHR004C ALD3P54114 506 aa8.2□□□□□ -1.1
NEM1YHR004C SUT1P53032 299 aaKnown RBP8.19□□□□□ -1.1
NEM1YHR004C MSB1P21339 1137 aaKnown RBP8.18□□□□□ -1.1
NEM1YHR004C RGD2P43556 714 aa8.18□□□□□ -1.1
NEM1YHR004C SMC1P32908 1225 aa8.17□□□□□ -1.1
NEM1YHR004C TFA2P36145 328 aa8.17□□□□□ -1.1
NEM1YHR004C RAD55P38953 406 aa8.17□□□□□ -1.1
NEM1YHR004C CTH1P47976 325 aa8.17□□□□□ -1.1
NEM1YHR004C ELG1Q12050 791 aa8.17□□□□□ -1.1
NEM1YHR004C APC11Q12157 165 aa8.17□□□□□ -1.1
NEM1YHR004C NEO1P40527 1151 aa8.16□□□□□ -1.1
NEM1YHR004C NCE103P53615 221 aa8.16□□□□□ -1.1
NEM1YHR004C YML083CQ04526 418 aa8.16□□□□□ -1.1
NEM1YHR004C IRS4P36115 615 aaKnown RBP8.14□□□□□ -1.11
NEM1YHR004C MAG2Q06436 670 aaKnown RBP8.14□□□□□ -1.11
NEM1YHR004C AOS1Q06624 347 aa8.14□□□□□ -1.11
NEM1YHR004C NOB1Q08444 459 aaKnown RBP8.14□□□□□ -1.11
NEM1YHR004C FUR4P05316 633 aaKnown RBP8.13□□□□□ -1.11
NEM1YHR004C FAR11P53917 953 aa8.13□□□□□ -1.11
NEM1YHR004C LSO1Q3E827 93 aa8.13□□□□□ -1.11
NEM1YHR004C YJR124CP47159 448 aa8.12□□□□□ -1.11
NEM1YHR004C YNR065CP53751 1116 aa8.12□□□□□ -1.11
NEM1YHR004C GIC2Q06648 383 aa8.12□□□□□ -1.11
NEM1YHR004C BOI1P38041 980 aaKnown RBP8.11□□□□□ -1.11
NEM1YHR004C PSY2P40164 858 aa8.11□□□□□ -1.11
NEM1YHR004C TIF6Q12522 245 aaKnown RBP8.11□□□□□ -1.11
NEM1YHR004C ELM1P32801 640 aa8.09□□□□□ -1.11
NEM1YHR004C KTR2P33550 425 aa8.08□□□□□ -1.12
NEM1YHR004C FET4P40988 552 aa8.08□□□□□ -1.12
NEM1YHR004C KIP3P53086 805 aaKnown RBP8.08□□□□□ -1.12
NEM1YHR004C HAS1Q03532 505 aaKnown RBP8.08□□□□□ -1.12
NEM1YHR004C GLO4Q12320 285 aa8.08□□□□□ -1.12
NEM1YHR004C ERS1P17261 260 aa8.07□□□□□ -1.12
NEM1YHR004C HVG1P0CE11 249 aa8.06□□□□□ -1.12
NEM1YHR004C RPB10P22139 70 aa8.06□□□□□ -1.12
NEM1YHR004C YLL054CQ12244 843 aa8.06□□□□□ -1.12
NEM1YHR004C NSI1Q12457 570 aa8.06□□□□□ -1.12
NEM1YHR004C PYC2P32327 1180 aaKnown RBP8.04□□□□□ -1.12
NEM1YHR004C YMR074CQ04773 145 aa8.04□□□□□ -1.12
NEM1YHR004C YOR223WQ12015 292 aa8.04□□□□□ -1.12
NEM1YHR004C MMM1P41800 426 aa8.02□□□□□ -1.13
NEM1YHR004C ECM2P38241 364 aaKnown RBP8□□□□□ -1.13
NEM1YHR004C SDH1Q00711 640 aa8□□□□□ -1.13
NEM1YHR004C YOR059CQ08448 450 aaKnown RBP8□□□□□ -1.13
NEM1YHR004C CIT3P43635 486 aa7.99□□□□□ -1.13
NEM1YHR004C BOL3P39724 118 aa7.98□□□□□ -1.13
NEM1YHR004C UBP5P39944 805 aa7.98□□□□□ -1.13
NEM1YHR004C ECL1P48235 211 aa7.98□□□□□ -1.13
NEM1YHR004C GCV1P48015 400 aa7.97□□□□□ -1.13
NEM1YHR004C UFD2P54860 961 aa7.96□□□□□ -1.14
NEM1YHR004C GPT2P36148 743 aa7.95□□□□□ -1.14
NEM1YHR004C GCD1P09032 578 aaPredicted RBP7.94□□□□□ -1.14
NEM1YHR004C POL12P38121 705 aaPredicted RBP7.94□□□□□ -1.14
NEM1YHR004C NIT1P40447 199 aa7.94□□□□□ -1.14
NEM1YHR004C DOT1Q04089 582 aaKnown RBP7.94□□□□□ -1.14
NEM1YHR004C WHI3P34761 661 aaKnown RBP7.93□□□□□ -1.14
NEM1YHR004C RCM1P53972 490 aa7.93□□□□□ -1.14
NEM1YHR004C SUB2Q07478 446 aaKnown RBP7.93□□□□□ -1.14
NEM1YHR004C YIG1Q08956 461 aa7.93□□□□□ -1.14
NEM1YHR004C SEG2P34250 1132 aa7.92□□□□□ -1.14
NEM1YHR004C CTR9P89105 1077 aa7.92□□□□□ -1.14
NEM1YHR004C RSC4Q02206 625 aa7.92□□□□□ -1.14
NEM1YHR004C RNQ1P25367 405 aa7.91□□□□□ -1.14
NEM1YHR004C SEA4P38164 1038 aa7.91□□□□□ -1.14
NEM1YHR004C GLO3P38682 493 aaKnown RBP7.91□□□□□ -1.14
NEM1YHR004C DFG16Q99234 619 aa7.91□□□□□ -1.14
NEM1YHR004C NPR1P22211 790 aa7.9□□□□□ -1.14
NEM1YHR004C LRG1P35688 1017 aa7.9□□□□□ -1.14
NEM1YHR004C PRP43P53131 767 aaKnown RBP7.9□□□□□ -1.14
NEM1YHR004C HTS1P07263 546 aaKnown RBP7.89□□□□□ -1.15
NEM1YHR004C RPL34AP87262 121 aaPredicted RBP7.89□□□□□ -1.15
NEM1YHR004C KAR5Q04746 504 aa7.89□□□□□ -1.15
NEM1YHR004C MEC3Q02574 474 aa7.88□□□□□ -1.15
NEM1YHR004C RIM11P38615 370 aa7.87□□□□□ -1.15
NEM1YHR004C PRP5P21372 849 aaPredicted RBP7.86□□□□□ -1.15
NEM1YHR004C QDR1P40475 563 aa7.86□□□□□ -1.15
NEM1YHR004C RLF2Q12495 606 aa7.86□□□□□ -1.15
NEM1YHR004C CMR1Q12510 522 aaKnown RBP7.86□□□□□ -1.15
NEM1YHR004C UTP22P53254 1237 aaPredicted RBP7.85□□□□□ -1.15
NEM1YHR004C RPS4AP0CX35 261 aaKnown RBP7.84□□□□□ -1.15
NEM1YHR004C RPS4BP0CX36 261 aaKnown RBP7.84□□□□□ -1.15
NEM1YHR004C YNL011CP53980 444 aa7.84□□□□□ -1.15
NEM1YHR004C COBP00163 385 aa7.83□□□□□ -1.16
NEM1YHR004C ADP1P25371 1049 aa7.83□□□□□ -1.16
NEM1YHR004C HSP78P33416 811 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms