RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YBL086CP38177 466 aa6.6□□□□□ -1.35
SKN1YGR143W ERC1P38767 581 aa6.6□□□□□ -1.35
SKN1YGR143W RTT107P38850 1070 aa6.6□□□□□ -1.35
SKN1YGR143W ADE16P54113 591 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W HEH2Q03281 663 aa6.6□□□□□ -1.35
SKN1YGR143W VMS1Q04311 632 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W SLX4Q12098 748 aa6.6□□□□□ -1.35
SKN1YGR143W SIR4P11978 1358 aa6.6□□□□□ -1.35
SKN1YGR143W CDC3P32457 520 aaKnown RBP6.59□□□□□ -1.35
SKN1YGR143W YEL1P34225 687 aa6.59□□□□□ -1.35
SKN1YGR143W MPE1P35728 441 aaKnown RBP6.59□□□□□ -1.35
SKN1YGR143W UBP13P38187 747 aa6.59□□□□□ -1.35
SKN1YGR143W GDT1P38301 280 aaPredicted RBP6.59□□□□□ -1.35
SKN1YGR143W SPR3P41901 512 aa6.59□□□□□ -1.35
SKN1YGR143W ADE12P80210 433 aaKnown RBP6.59□□□□□ -1.35
SKN1YGR143W UBX2Q04228 584 aa6.59□□□□□ -1.35
SKN1YGR143W CDC45Q08032 650 aa6.59□□□□□ -1.35
SKN1YGR143W YJL181WP46987 611 aa6.59□□□□□ -1.36
SKN1YGR143W IST1P53843 298 aaPredicted RBP6.59□□□□□ -1.36
SKN1YGR143W ARP5P53946 755 aa6.59□□□□□ -1.36
SKN1YGR143W NUP145P49687 1317 aa6.59□□□□□ -1.36
SKN1YGR143W SEC14P24280 304 aaKnown RBP6.58□□□□□ -1.36
SKN1YGR143W UGA3P26370 528 aa6.58□□□□□ -1.36
SKN1YGR143W CIR2Q08822 631 aa6.58□□□□□ -1.36
SKN1YGR143W SGT2Q12118 346 aaKnown RBP6.58□□□□□ -1.36
SKN1YGR143W MSM1P22438 575 aa6.58□□□□□ -1.36
SKN1YGR143W GRX4P32642 244 aa6.58□□□□□ -1.36
SKN1YGR143W STE5P32917 917 aa6.58□□□□□ -1.36
SKN1YGR143W PEX5P35056 612 aa6.58□□□□□ -1.36
SKN1YGR143W SAP1P39955 897 aaKnown RBP6.58□□□□□ -1.36
SKN1YGR143W RIO2P40160 425 aaKnown RBP6.58□□□□□ -1.36
SKN1YGR143W YIR042CP40586 236 aa6.58□□□□□ -1.36
SKN1YGR143W RIM15P43565 1770 aa6.57□□□□□ -1.36
SKN1YGR143W RPA135P22138 1203 aaKnown RBP6.57□□□□□ -1.36
SKN1YGR143W RME1P32338 300 aaKnown RBP6.57□□□□□ -1.36
SKN1YGR143W PRP40P33203 583 aaKnown RBP6.57□□□□□ -1.36
SKN1YGR143W ARC19P33204 171 aaKnown RBP6.57□□□□□ -1.36
SKN1YGR143W FAF1P40546 346 aaPredicted RBP6.57□□□□□ -1.36
SKN1YGR143W CTH1P47976 325 aa6.57□□□□□ -1.36
SKN1YGR143W TEA1P47988 759 aa6.57□□□□□ -1.36
SKN1YGR143W OCA1P50946 238 aaPredicted RBP6.57□□□□□ -1.36
SKN1YGR143W SFI1Q12369 946 aa6.57□□□□□ -1.36
SKN1YGR143W CEX1Q12453 761 aa6.57□□□□□ -1.36
SKN1YGR143W BUD14P27637 709 aa6.56□□□□□ -1.36
SKN1YGR143W SPC42P36094 363 aa6.56□□□□□ -1.36
SKN1YGR143W SHC1P39000 512 aa6.56□□□□□ -1.36
SKN1YGR143W RPL17BP46990 184 aaKnown RBP6.56□□□□□ -1.36
SKN1YGR143W YNL058CP53947 316 aa6.56□□□□□ -1.36
SKN1YGR143W APC5Q08683 685 aa6.56□□□□□ -1.36
SKN1YGR143W RPO41P13433 1351 aaKnown RBP6.56□□□□□ -1.36
SKN1YGR143W SAC3P46674 1301 aa6.56□□□□□ -1.36
SKN1YGR143W TRK1P12685 1235 aa6.56□□□□□ -1.36
SKN1YGR143W ILV3P39522 585 aaKnown RBP6.56□□□□□ -1.36
SKN1YGR143W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
SKN1YGR143W KAR2P16474 682 aaKnown RBP6.55□□□□□ -1.36
SKN1YGR143W BFA1P47113 574 aa6.55□□□□□ -1.36
SKN1YGR143W DSL1P53847 754 aa6.55□□□□□ -1.36
SKN1YGR143W ELA1P53861 379 aaPredicted RBP6.55□□□□□ -1.36
SKN1YGR143W CTF4Q01454 927 aa6.55□□□□□ -1.36
SKN1YGR143W VPS20Q04272 221 aa6.55□□□□□ -1.36
SKN1YGR143W LCD1Q04377 747 aa6.55□□□□□ -1.36
SKN1YGR143W MCM2P29469 868 aa6.55□□□□□ -1.36
SKN1YGR143W ATG14P38270 344 aa6.55□□□□□ -1.36
SKN1YGR143W MAM1P40065 302 aa6.55□□□□□ -1.36
SKN1YGR143W MEC3Q02574 474 aa6.55□□□□□ -1.36
SKN1YGR143W YML020WQ03722 664 aa6.55□□□□□ -1.36
SKN1YGR143W PCL8Q08966 492 aa6.55□□□□□ -1.36
SKN1YGR143W TRS33Q99394 268 aa6.55□□□□□ -1.36
SKN1YGR143W ACP1P32463 125 aa6.54□□□□□ -1.36
SKN1YGR143W RRP1P35178 278 aaPredicted RBP6.54□□□□□ -1.36
SKN1YGR143W PES4P39684 611 aa6.54□□□□□ -1.36
SKN1YGR143W HOT1Q03213 719 aa6.54□□□□□ -1.36
SKN1YGR143W YPR097WQ06839 1073 aa6.54□□□□□ -1.36
SKN1YGR143W RKM4Q12504 494 aa6.54□□□□□ -1.36
SKN1YGR143W VPS41P38959 992 aa6.54□□□□□ -1.36
SKN1YGR143W SMD2Q06217 110 aaKnown RBP6.54□□□□□ -1.36
SKN1YGR143W YDL144CQ07589 356 aa6.54□□□□□ -1.36
SKN1YGR143W INP54Q08227 384 aaKnown RBP6.54□□□□□ -1.36
SKN1YGR143W NPL4P33755 580 aa6.53□□□□□ -1.36
SKN1YGR143W COY1P34237 679 aa6.53□□□□□ -1.36
SKN1YGR143W RPC37P36121 282 aa6.53□□□□□ -1.36
SKN1YGR143W CIC1P38779 376 aaKnown RBP6.53□□□□□ -1.36
SKN1YGR143W PET100P38958 111 aa6.53□□□□□ -1.36
SKN1YGR143W YMR111CQ04461 462 aaPredicted RBP6.53□□□□□ -1.36
SKN1YGR143W HMG1P12683 1054 aa6.53□□□□□ -1.36
SKN1YGR143W UBP12P39538 1254 aa6.53□□□□□ -1.36
SKN1YGR143W KEL2P50090 882 aa6.53□□□□□ -1.36
SKN1YGR143W RSM28Q03430 361 aa6.53□□□□□ -1.36
SKN1YGR143W OPI1P21957 404 aa6.52□□□□□ -1.37
SKN1YGR143W CDC48P25694 835 aaKnown RBP6.52□□□□□ -1.37
SKN1YGR143W HIR2P32480 875 aa6.52□□□□□ -1.37
SKN1YGR143W YME2P32843 850 aa6.52□□□□□ -1.37
SKN1YGR143W UGA2P38067 497 aa6.52□□□□□ -1.37
SKN1YGR143W SSZ1P38788 538 aaKnown RBP6.52□□□□□ -1.37
SKN1YGR143W SDS3P40505 327 aa6.52□□□□□ -1.37
SKN1YGR143W KRE28Q04431 385 aa6.52□□□□□ -1.37
SKN1YGR143W OSM1P21375 501 aaKnown RBP6.51□□□□□ -1.37
SKN1YGR143W GGA2P38817 585 aaKnown RBP6.51□□□□□ -1.37
SKN1YGR143W GTT3P39996 337 aa6.51□□□□□ -1.37
SKN1YGR143W ATG13Q06628 738 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms