RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W PRT1P06103 763 aaKnown RBP8.19□□□□□ -1.1
SNU71YGR013W KAR1P11927 433 aa8.19□□□□□ -1.1
SNU71YGR013W DAT1P13483 248 aaKnown RBP8.19□□□□□ -1.1
SNU71YGR013W MRC1P25588 1096 aa8.19□□□□□ -1.1
SNU71YGR013W PAT1P25644 796 aaKnown RBP8.19□□□□□ -1.1
SNU71YGR013W RAD27P26793 382 aa8.19□□□□□ -1.1
SNU71YGR013W MCM5P29496 775 aaKnown RBP8.19□□□□□ -1.1
SNU71YGR013W STE5P32917 917 aa8.19□□□□□ -1.1
SNU71YGR013W RAD55P38953 406 aa8.19□□□□□ -1.1
SNU71YGR013W EMW1P42842 904 aaKnown RBP8.19□□□□□ -1.1
SNU71YGR013W YPQ2Q06328 317 aa8.19□□□□□ -1.1
SNU71YGR013W IOC2Q12072 812 aa8.19□□□□□ -1.1
SNU71YGR013W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SNU71YGR013W GCR1P07261 785 aa8.18□□□□□ -1.1
SNU71YGR013W BAS1P22035 811 aa8.18□□□□□ -1.1
SNU71YGR013W SCD5P34758 872 aa8.18□□□□□ -1.1
SNU71YGR013W TBS1P38114 1094 aa8.18□□□□□ -1.1
SNU71YGR013W YBR184WP38299 523 aa8.18□□□□□ -1.1
SNU71YGR013W PIC2P40035 300 aa8.18□□□□□ -1.1
SNU71YGR013W RGD2P43556 714 aa8.18□□□□□ -1.1
SNU71YGR013W MCM1P11746 286 aa8.17□□□□□ -1.1
SNU71YGR013W RPL8AP17076 256 aaKnown RBP8.17□□□□□ -1.1
SNU71YGR013W RTT10Q08924 1013 aa8.17□□□□□ -1.1
SNU71YGR013W CAN1P04817 590 aa8.17□□□□□ -1.1
SNU71YGR013W GAL11P19659 1081 aa8.17□□□□□ -1.1
SNU71YGR013W FBP26P32604 452 aa8.17□□□□□ -1.1
SNU71YGR013W NTA1P40354 457 aa8.17□□□□□ -1.1
SNU71YGR013W PEX8P53248 589 aa8.17□□□□□ -1.1
SNU71YGR013W EEB1Q02891 456 aa8.17□□□□□ -1.1
SNU71YGR013W NTG2Q08214 380 aa8.17□□□□□ -1.1
SNU71YGR013W FLP1P03870 423 aa8.16□□□□□ -1.1
SNU71YGR013W FUI1P38196 639 aa8.16□□□□□ -1.1
SNU71YGR013W TIF11P38912 153 aaKnown RBP8.16□□□□□ -1.1
SNU71YGR013W TIF6Q12522 245 aaKnown RBP8.16□□□□□ -1.1
SNU71YGR013W RPL8BP29453 256 aaKnown RBP8.15□□□□□ -1.1
SNU71YGR013W ULP1Q02724 621 aa8.15□□□□□ -1.1
SNU71YGR013W ADI1Q03677 179 aa8.15□□□□□ -1.1
SNU71YGR013W OSH2Q12451 1283 aa8.15□□□□□ -1.1
SNU71YGR013W ATG2P53855 1592 aa8.15□□□□□ -1.11
SNU71YGR013W VPS24P36095 224 aaKnown RBP8.15□□□□□ -1.11
SNU71YGR013W LDH1P38139 375 aa8.15□□□□□ -1.11
SNU71YGR013W VNX1P42839 908 aa8.15□□□□□ -1.11
SNU71YGR013W MDG1P53885 366 aa8.15□□□□□ -1.11
SNU71YGR013W SPO75Q07798 868 aa8.15□□□□□ -1.11
SNU71YGR013W WTM2Q12206 467 aa8.15□□□□□ -1.11
SNU71YGR013W YPR015CQ12531 247 aa8.15□□□□□ -1.11
SNU71YGR013W KAR2P16474 682 aaKnown RBP8.14□□□□□ -1.11
SNU71YGR013W VMA4P22203 233 aaKnown RBP8.14□□□□□ -1.11
SNU71YGR013W PWP2P25635 923 aaKnown RBP8.14□□□□□ -1.11
SNU71YGR013W MSH2P25847 964 aa8.14□□□□□ -1.11
SNU71YGR013W IRS4P36115 615 aaKnown RBP8.14□□□□□ -1.11
SNU71YGR013W GGA2P38817 585 aaKnown RBP8.14□□□□□ -1.11
SNU71YGR013W PSY2P40164 858 aa8.14□□□□□ -1.11
SNU71YGR013W RPA135P22138 1203 aaKnown RBP8.13□□□□□ -1.11
SNU71YGR013W MSN1P22148 382 aa8.13□□□□□ -1.11
SNU71YGR013W YDR344CQ05510 147 aa8.13□□□□□ -1.11
SNU71YGR013W YBL029C-AQ3E756 94 aa8.13□□□□□ -1.11
SNU71YGR013W REV3P14284 1504 aa8.13□□□□□ -1.11
SNU71YGR013W CIT1P00890 479 aa8.13□□□□□ -1.11
SNU71YGR013W HSP60P19882 572 aaKnown RBP8.13□□□□□ -1.11
SNU71YGR013W SPT16P32558 1035 aaKnown RBP8.13□□□□□ -1.11
SNU71YGR013W BOI2P39969 1040 aa8.13□□□□□ -1.11
SNU71YGR013W ARH1P48360 493 aa8.13□□□□□ -1.11
SNU71YGR013W SEC61P32915 480 aa8.12□□□□□ -1.11
SNU71YGR013W CEF1Q03654 590 aaPredicted RBP8.12□□□□□ -1.11
SNU71YGR013W FMP25Q08023 583 aa8.12□□□□□ -1.11
SNU71YGR013W YOR378WQ08902 515 aa8.12□□□□□ -1.11
SNU71YGR013W TRX2P22803 104 aaKnown RBP8.11□□□□□ -1.11
SNU71YGR013W RTG1P32607 177 aa8.11□□□□□ -1.11
SNU71YGR013W MKS1P34072 584 aa8.11□□□□□ -1.11
SNU71YGR013W BNI4P53858 892 aa8.11□□□□□ -1.11
SNU71YGR013W ESC2Q06340 456 aa8.11□□□□□ -1.11
SNU71YGR013W TMA17Q12513 150 aa8.11□□□□□ -1.11
SNU71YGR013W THS1P04801 734 aaKnown RBP8.11□□□□□ -1.11
SNU71YGR013W DYS1P38791 387 aa8.11□□□□□ -1.11
SNU71YGR013W FIR1P40020 876 aa8.11□□□□□ -1.11
SNU71YGR013W UTP7P40055 554 aaKnown RBP8.11□□□□□ -1.11
SNU71YGR013W STE6P12866 1290 aa8.1□□□□□ -1.11
SNU71YGR013W SFP1P32432 683 aa8.1□□□□□ -1.11
SNU71YGR013W CDC11P32458 415 aa8.1□□□□□ -1.11
SNU71YGR013W MON1P53129 644 aa8.1□□□□□ -1.11
SNU71YGR013W CTR9P89105 1077 aa8.1□□□□□ -1.11
SNU71YGR013W ATG13Q06628 738 aa8.1□□□□□ -1.11
SNU71YGR013W MRL1Q06815 381 aa8.1□□□□□ -1.11
SNU71YGR013W YDL129WQ07555 291 aa8.1□□□□□ -1.11
SNU71YGR013W TMA46Q12000 345 aaKnown RBP8.1□□□□□ -1.11
SNU71YGR013W PFD1P46988 109 aa8.09□□□□□ -1.11
SNU71YGR013W RTA1P53047 317 aa8.09□□□□□ -1.11
SNU71YGR013W TMA64Q04600 565 aaKnown RBP8.09□□□□□ -1.11
SNU71YGR013W Q0182Q9ZZW1 134 aa8.09□□□□□ -1.11
SNU71YGR013W QDR2P40474 542 aa8.09□□□□□ -1.12
SNU71YGR013W SUM1P46676 1062 aa8.09□□□□□ -1.12
SNU71YGR013W YJR120WP47157 116 aa8.09□□□□□ -1.12
SNU71YGR013W GNP1P48813 663 aa8.09□□□□□ -1.12
SNU71YGR013W YNL165WP53891 406 aa8.09□□□□□ -1.12
SNU71YGR013W UTP4Q06679 776 aaKnown RBP8.09□□□□□ -1.12
SNU71YGR013W SLX4Q12098 748 aa8.09□□□□□ -1.12
SNU71YGR013W COBP00163 385 aa8.08□□□□□ -1.12
SNU71YGR013W AGP1P25376 633 aa8.08□□□□□ -1.12
SNU71YGR013W KRE33P53914 1056 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms