RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W SRT1Q03175 343 aa6.24□□□□□ -1.41
VID30YGL227W CDC45Q08032 650 aa6.24□□□□□ -1.41
VID30YGL227W SNU66Q12420 587 aaPredicted RBP6.24□□□□□ -1.41
VID30YGL227W SNA3P14359 133 aa6.23□□□□□ -1.41
VID30YGL227W PAH1P32567 862 aa6.23□□□□□ -1.41
VID30YGL227W BOI2P39969 1040 aa6.23□□□□□ -1.41
VID30YGL227W THI22Q06490 572 aa6.23□□□□□ -1.41
VID30YGL227W FLO11P08640 1367 aa6.23□□□□□ -1.41
VID30YGL227W FBP1P09201 348 aa6.23□□□□□ -1.41
VID30YGL227W MAL31P38156 614 aa6.23□□□□□ -1.41
VID30YGL227W YJL007CP47080 104 aa6.22□□□□□ -1.41
VID30YGL227W TIF1P10081 395 aaKnown RBP6.22□□□□□ -1.41
VID30YGL227W CWC22P53333 577 aaKnown RBP6.22□□□□□ -1.41
VID30YGL227W ZDS2P54786 942 aa6.22□□□□□ -1.41
VID30YGL227W AIM44Q99299 758 aa6.22□□□□□ -1.41
VID30YGL227W GRS1P38088 690 aaKnown RBP6.21□□□□□ -1.41
VID30YGL227W VPS27P40343 622 aaKnown RBP6.21□□□□□ -1.41
VID30YGL227W YGR125WP53273 1036 aa6.21□□□□□ -1.41
VID30YGL227W SYN8P31377 255 aa6.21□□□□□ -1.42
VID30YGL227W BIO2P32451 375 aa6.21□□□□□ -1.42
VID30YGL227W PRY3P47033 881 aa6.21□□□□□ -1.42
VID30YGL227W YJL045WP47052 634 aa6.21□□□□□ -1.42
VID30YGL227W TPO2P53283 614 aa6.21□□□□□ -1.42
VID30YGL227W MRF1P30775 413 aaPredicted RBP6.2□□□□□ -1.42
VID30YGL227W FCP1Q03254 732 aa6.2□□□□□ -1.42
VID30YGL227W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
VID30YGL227W CST26P38226 397 aa6.2□□□□□ -1.42
VID30YGL227W RPT4P53549 437 aaKnown RBP6.2□□□□□ -1.42
VID30YGL227W TOM71P38825 639 aaKnown RBP6.2□□□□□ -1.42
VID30YGL227W SET4P42948 560 aa6.2□□□□□ -1.42
VID30YGL227W ALD6P54115 500 aaKnown RBP6.2□□□□□ -1.42
VID30YGL227W IRC4Q03036 179 aa6.2□□□□□ -1.42
VID30YGL227W THI3Q07471 609 aa6.2□□□□□ -1.42
VID30YGL227W ULP1Q02724 621 aa6.19□□□□□ -1.42
VID30YGL227W PUS6P53294 404 aa6.19□□□□□ -1.42
VID30YGL227W MOT1P32333 1867 aa6.19□□□□□ -1.42
VID30YGL227W OPI1P21957 404 aa6.18□□□□□ -1.42
VID30YGL227W VPS62P53285 467 aa6.18□□□□□ -1.42
VID30YGL227W YVH1Q02256 364 aaKnown RBP6.18□□□□□ -1.42
VID30YGL227W IDI1P15496 288 aa6.18□□□□□ -1.42
VID30YGL227W PSF2P40359 213 aa6.18□□□□□ -1.42
VID30YGL227W SIS2P36024 562 aa6.17□□□□□ -1.42
VID30YGL227W PRE10P21242 288 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
VID30YGL227W KSP1P38691 1029 aaKnown RBP6.17□□□□□ -1.42
VID30YGL227W MDM1Q01846 1127 aa6.17□□□□□ -1.42
VID30YGL227W JIP4Q03361 876 aa6.17□□□□□ -1.42
VID30YGL227W ISA1Q07821 250 aaPredicted RBP6.17□□□□□ -1.42
VID30YGL227W KEL1P38853 1164 aaKnown RBP6.16□□□□□ -1.42
VID30YGL227W RSC8P43609 557 aaKnown RBP6.16□□□□□ -1.42
VID30YGL227W FAR11P53917 953 aa6.16□□□□□ -1.42
VID30YGL227W PMA1P05030 918 aaKnown RBP6.16□□□□□ -1.42
VID30YGL227W ADP1P25371 1049 aa6.15□□□□□ -1.42
VID30YGL227W BRL1P38770 471 aa6.15□□□□□ -1.42
VID30YGL227W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
VID30YGL227W PIP2P52960 996 aa6.15□□□□□ -1.42
VID30YGL227W PKH1Q03407 766 aa6.15□□□□□ -1.42
VID30YGL227W EUG1P32474 517 aa6.15□□□□□ -1.43
VID30YGL227W GPT2P36148 743 aa6.15□□□□□ -1.43
VID30YGL227W STB5P38699 743 aa6.15□□□□□ -1.43
VID30YGL227W SGD1Q06132 899 aa6.14□□□□□ -1.43
VID30YGL227W MCD4P36051 919 aa6.14□□□□□ -1.43
VID30YGL227W RTT109Q07794 436 aa6.14□□□□□ -1.43
VID30YGL227W ECM29P38737 1868 aa6.13□□□□□ -1.43
VID30YGL227W GAP1P19145 602 aaPredicted RBP6.13□□□□□ -1.43
VID30YGL227W ACA1P39970 489 aa6.13□□□□□ -1.43
VID30YGL227W ENP2P48234 707 aaKnown RBP6.13□□□□□ -1.43
VID30YGL227W FKS1P38631 1876 aaKnown RBP6.13□□□□□ -1.43
VID30YGL227W BOI1P38041 980 aaKnown RBP6.13□□□□□ -1.43
VID30YGL227W MMR1Q06324 491 aa6.13□□□□□ -1.43
VID30YGL227W PHR1P05066 565 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
VID30YGL227W ASF1P32447 279 aa6.12□□□□□ -1.43
VID30YGL227W STV1P37296 890 aa6.12□□□□□ -1.43
VID30YGL227W HAL5P38970 855 aaKnown RBP6.12□□□□□ -1.43
VID30YGL227W MMF1P40185 145 aaKnown RBP6.12□□□□□ -1.43
VID30YGL227W LSB6P42951 607 aa6.12□□□□□ -1.43
VID30YGL227W YGR130CP53278 816 aa6.12□□□□□ -1.43
VID30YGL227W SPE3Q12074 293 aaKnown RBP6.12□□□□□ -1.43
VID30YGL227W RAD59Q12223 238 aa6.12□□□□□ -1.43
VID30YGL227W MAM3Q12296 706 aa6.12□□□□□ -1.43
VID30YGL227W PFK2P16862 959 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
VID30YGL227W RTS1P38903 757 aa6.12□□□□□ -1.43
VID30YGL227W MCM6P53091 1017 aaKnown RBP6.12□□□□□ -1.43
VID30YGL227W NGR1P32831 672 aaKnown RBP6.11□□□□□ -1.43
VID30YGL227W YAP1801P38856 637 aa6.11□□□□□ -1.43
VID30YGL227W VPS53P47061 822 aa6.11□□□□□ -1.43
VID30YGL227W MLC1P53141 149 aa6.11□□□□□ -1.43
VID30YGL227W PRE8P23639 250 aa6.11□□□□□ -1.43
VID30YGL227W FUB1P25659 250 aa6.11□□□□□ -1.43
VID30YGL227W PAM1P37304 830 aaKnown RBP6.11□□□□□ -1.43
VID30YGL227W HMF1P40037 129 aaKnown RBP6.11□□□□□ -1.43
VID30YGL227W SEN54Q02825 467 aaPredicted RBP6.11□□□□□ -1.43
VID30YGL227W VPS64Q03944 604 aa6.11□□□□□ -1.43
VID30YGL227W RAD61Q99359 647 aa6.11□□□□□ -1.43
VID30YGL227W NUP133P36161 1157 aa6.1□□□□□ -1.43
VID30YGL227W KAR5Q04746 504 aa6.1□□□□□ -1.43
VID30YGL227W NCB2Q92317 146 aa6.1□□□□□ -1.43
VID30YGL227W RAD2P07276 1031 aa6.1□□□□□ -1.43
VID30YGL227W GUA1P38625 525 aaKnown RBP6.1□□□□□ -1.43
VID30YGL227W VPS4P52917 437 aa6.1□□□□□ -1.43
VID30YGL227W ATG1P53104 897 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms