RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	RCF1	Q03713	159 aa		4.64	□□□□□ -1.67
SPI1	YER150W	SND1	Q04007	877 aa		4.64	□□□□□ -1.67
SPI1	YER150W	TSR2	Q06672	205 aa	Known RBP	4.64	□□□□□ -1.67
SPI1	YER150W	CIT1	P00890	479 aa		4.63	□□□□□ -1.67
SPI1	YER150W	CDC31	P06704	161 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	RDS2	P19541	446 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	MSM1	P22438	575 aa		4.63	□□□□□ -1.67
SPI1	YER150W	KRR1	P25586	316 aa	Predicted RBP	4.63	□□□□□ -1.67
SPI1	YER150W	MRS6	P32864	603 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	RPT1	P33299	467 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	PET112	P33893	541 aa		4.63	□□□□□ -1.67
SPI1	YER150W	NIT1	P40447	199 aa		4.63	□□□□□ -1.67
SPI1	YER150W	FOX2	Q02207	900 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	HEL2	Q05580	639 aa	Known RBP	4.63	□□□□□ -1.67
SPI1	YER150W	IRC3	Q06683	689 aa		4.63	□□□□□ -1.67
SPI1	YER150W	CFT2	Q12102	859 aa	Predicted RBP	4.63	□□□□□ -1.67
SPI1	YER150W	CEX1	Q12453	761 aa		4.63	□□□□□ -1.67
SPI1	YER150W	MSH2	P25847	964 aa		4.62	□□□□□ -1.67
SPI1	YER150W	YJU3	P28321	313 aa		4.62	□□□□□ -1.67
SPI1	YER150W	SFP1	P32432	683 aa		4.62	□□□□□ -1.67
SPI1	YER150W	VPH1	P32563	840 aa	Known RBP	4.62	□□□□□ -1.67
SPI1	YER150W	STE5	P32917	917 aa		4.62	□□□□□ -1.67
SPI1	YER150W	PTH2	P34222	208 aa		4.62	□□□□□ -1.67
SPI1	YER150W	YHR218W	P38899	603 aa		4.62	□□□□□ -1.67
SPI1	YER150W	CAJ1	P39101	391 aa		4.62	□□□□□ -1.67
SPI1	YER150W	RSC1	P53236	928 aa		4.62	□□□□□ -1.67
SPI1	YER150W	NIS1	P53939	407 aa		4.62	□□□□□ -1.67
SPI1	YER150W	YNL058C	P53947	316 aa		4.62	□□□□□ -1.67
SPI1	YER150W	NAN1	Q02931	896 aa	Known RBP	4.62	□□□□□ -1.67
SPI1	YER150W	VTI1	Q04338	217 aa		4.62	□□□□□ -1.67
SPI1	YER150W	RRP9	Q06506	573 aa	Known RBP	4.62	□□□□□ -1.67
SPI1	YER150W	SGT2	Q12118	346 aa	Known RBP	4.62	□□□□□ -1.67
SPI1	YER150W	REC8	Q12188	680 aa		4.62	□□□□□ -1.67
SPI1	YER150W	TOM70	P07213	617 aa	Known RBP	4.61	□□□□□ -1.67
SPI1	YER150W	PHO4	P07270	312 aa	Known RBP	4.61	□□□□□ -1.67
SPI1	YER150W	HOM3	P10869	527 aa		4.61	□□□□□ -1.67
SPI1	YER150W	RPL8A	P17076	256 aa	Known RBP	4.61	□□□□□ -1.67
SPI1	YER150W	SIT4	P20604	311 aa		4.61	□□□□□ -1.67
SPI1	YER150W	MEF1	P25039	761 aa		4.61	□□□□□ -1.67
SPI1	YER150W	URA1	P28272	314 aa	Predicted RBP	4.61	□□□□□ -1.67
SPI1	YER150W	YKL050C	P35736	922 aa		4.61	□□□□□ -1.67
SPI1	YER150W	TRZ1	P36159	838 aa	Predicted RBP	4.61	□□□□□ -1.67
SPI1	YER150W	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
SPI1	YER150W	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
SPI1	YER150W	NDE1	P40215	560 aa		4.61	□□□□□ -1.67
SPI1	YER150W	GPP1	P41277	250 aa	Known RBP	4.61	□□□□□ -1.67
SPI1	YER150W	YGR016W	P53209	190 aa		4.61	□□□□□ -1.67
SPI1	YER150W	HOL1	P53389	586 aa		4.61	□□□□□ -1.67
SPI1	YER150W	PSR2	Q07949	397 aa		4.61	□□□□□ -1.67
SPI1	YER150W	CLF1	Q12309	687 aa	Predicted RBP	4.61	□□□□□ -1.67
SPI1	YER150W	SCJ1	P25303	377 aa		4.6	□□□□□ -1.67
SPI1	YER150W	CDC60	P26637	1090 aa	Known RBP	4.6	□□□□□ -1.67
SPI1	YER150W	MRF1	P30775	413 aa	Predicted RBP	4.6	□□□□□ -1.67
SPI1	YER150W	SMY2	P32909	740 aa	Known RBP	4.6	□□□□□ -1.67
SPI1	YER150W	YKL100C	P34248	587 aa		4.6	□□□□□ -1.67
SPI1	YER150W	RXT2	P38255	430 aa		4.6	□□□□□ -1.67
SPI1	YER150W	RPS26A	P39938	119 aa	Known RBP	4.6	□□□□□ -1.67
SPI1	YER150W	RPS26B	P39939	119 aa	Known RBP	4.6	□□□□□ -1.67
SPI1	YER150W	SAP185	P40856	1058 aa		4.6	□□□□□ -1.67
SPI1	YER150W	VTC2	P43585	828 aa		4.6	□□□□□ -1.67
SPI1	YER150W	YJR120W	P47157	116 aa		4.6	□□□□□ -1.67
SPI1	YER150W	YGR237C	P50089	785 aa		4.6	□□□□□ -1.67
SPI1	YER150W	SPC105	P53148	917 aa		4.6	□□□□□ -1.67
SPI1	YER150W	ERO1	Q03103	563 aa		4.6	□□□□□ -1.67
SPI1	YER150W	PUN1	Q06991	263 aa		4.6	□□□□□ -1.67
SPI1	YER150W	ENV9	Q08651	330 aa		4.6	□□□□□ -1.67
SPI1	YER150W	SST2	P11972	698 aa	Known RBP	4.59	□□□□□ -1.67
SPI1	YER150W	PHO87	P25360	923 aa		4.59	□□□□□ -1.67
SPI1	YER150W	RAD54	P32863	898 aa		4.59	□□□□□ -1.67
SPI1	YER150W	STO1	P34160	861 aa	Known RBP	4.59	□□□□□ -1.67
SPI1	YER150W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SPI1	YER150W	ORC6	P38826	435 aa		4.59	□□□□□ -1.67
SPI1	YER150W	PMT3	P47190	753 aa		4.59	□□□□□ -1.67
SPI1	YER150W	SAM37	P50110	327 aa		4.59	□□□□□ -1.67
SPI1	YER150W	ATP22	P50273	684 aa	Predicted RBP	4.59	□□□□□ -1.67
SPI1	YER150W	ENV11	P53246	860 aa		4.59	□□□□□ -1.67
SPI1	YER150W	NAF1	P53919	492 aa	Known RBP	4.59	□□□□□ -1.67
SPI1	YER150W	TDA5	Q06417	326 aa	Known RBP	4.59	□□□□□ -1.67
SPI1	YER150W	PSR1	Q07800	427 aa		4.59	□□□□□ -1.67
SPI1	YER150W	FLC1	Q08967	793 aa		4.59	□□□□□ -1.67
SPI1	YER150W	SPT7	P35177	1332 aa		4.58	□□□□□ -1.68
SPI1	YER150W	NAT1	P12945	854 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	RGR1	P19263	1082 aa		4.58	□□□□□ -1.68
SPI1	YER150W	ACE2	P21192	770 aa		4.58	□□□□□ -1.68
SPI1	YER150W	RAD51	P25454	400 aa		4.58	□□□□□ -1.68
SPI1	YER150W	AAD3	P25612	363 aa		4.58	□□□□□ -1.68
SPI1	YER150W	GAR1	P28007	205 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	YHR020W	P38708	688 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	RSP5	P39940	809 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	ALA1	P40825	983 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	HLJ1	P48353	224 aa		4.58	□□□□□ -1.68
SPI1	YER150W	PIP2	P52960	996 aa		4.58	□□□□□ -1.68
SPI1	YER150W	TYW3	P53177	273 aa		4.58	□□□□□ -1.68
SPI1	YER150W	BTN2	P53286	410 aa		4.58	□□□□□ -1.68
SPI1	YER150W	BNI5	P53890	448 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	BUL2	Q03758	920 aa	Known RBP	4.58	□□□□□ -1.68
SPI1	YER150W	TRS120	Q04183	1289 aa		4.58	□□□□□ -1.68
SPI1	YER150W	YSH1	Q06224	779 aa	Predicted RBP	4.58	□□□□□ -1.68
SPI1	YER150W	BUD20	Q08004	166 aa	Predicted RBP	4.58	□□□□□ -1.68
SPI1	YER150W	NTG2	Q08214	380 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms