RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W DSE4P53753 1117 aa3.37□□□□□ -1.87
LCD1YDR499W FUR4P05316 633 aaKnown RBP3.36□□□□□ -1.87
LCD1YDR499W YKR073CP36153 106 aa3.36□□□□□ -1.87
LCD1YDR499W RAD55P38953 406 aa3.36□□□□□ -1.87
LCD1YDR499W TIF6Q12522 245 aaKnown RBP3.36□□□□□ -1.87
LCD1YDR499W FUS1P11710 512 aa3.36□□□□□ -1.87
LCD1YDR499W BOL3P39724 118 aa3.36□□□□□ -1.87
LCD1YDR499W MED7Q08278 222 aa3.36□□□□□ -1.87
LCD1YDR499W APC11Q12157 165 aa3.36□□□□□ -1.87
LCD1YDR499W LIP5P32875 414 aa3.35□□□□□ -1.87
LCD1YDR499W SAF1P38352 637 aa3.35□□□□□ -1.87
LCD1YDR499W NTA1P40354 457 aa3.35□□□□□ -1.87
LCD1YDR499W NEO1P40527 1151 aa3.35□□□□□ -1.87
LCD1YDR499W YGR130CP53278 816 aa3.35□□□□□ -1.87
LCD1YDR499W SOG2Q08817 791 aa3.35□□□□□ -1.87
LCD1YDR499W REC8Q12188 680 aa3.35□□□□□ -1.87
LCD1YDR499W CHS2P14180 963 aa3.35□□□□□ -1.87
LCD1YDR499W GUP1P53154 560 aa3.35□□□□□ -1.87
LCD1YDR499W SUB2Q07478 446 aaKnown RBP3.35□□□□□ -1.87
LCD1YDR499W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
LCD1YDR499W LSO1Q3E827 93 aa3.35□□□□□ -1.87
LCD1YDR499W TOS1P38288 455 aa3.34□□□□□ -1.87
LCD1YDR499W PSY2P40164 858 aa3.34□□□□□ -1.87
LCD1YDR499W SMC1P32908 1225 aa3.34□□□□□ -1.88
LCD1YDR499W MAE1P36013 669 aaKnown RBP3.34□□□□□ -1.88
LCD1YDR499W IRS4P36115 615 aaKnown RBP3.34□□□□□ -1.88
LCD1YDR499W POL5P39985 1022 aaKnown RBP3.34□□□□□ -1.88
LCD1YDR499W YJR124CP47159 448 aa3.34□□□□□ -1.88
LCD1YDR499W LEM3P42838 414 aa3.33□□□□□ -1.88
LCD1YDR499W YNR065CP53751 1116 aa3.33□□□□□ -1.88
LCD1YDR499W SPO71Q03868 1245 aa3.33□□□□□ -1.88
LCD1YDR499W ELG1Q12050 791 aa3.33□□□□□ -1.88
LCD1YDR499W ERS1P17261 260 aa3.32□□□□□ -1.88
LCD1YDR499W PYC2P32327 1180 aaKnown RBP3.32□□□□□ -1.88
LCD1YDR499W KIP3P53086 805 aaKnown RBP3.32□□□□□ -1.88
LCD1YDR499W HAS1Q03532 505 aaKnown RBP3.32□□□□□ -1.88
LCD1YDR499W GLO4Q12320 285 aa3.32□□□□□ -1.88
LCD1YDR499W CYC7P00045 113 aa3.31□□□□□ -1.88
LCD1YDR499W AVT1P47082 602 aa3.31□□□□□ -1.88
LCD1YDR499W CTH1P47976 325 aa3.31□□□□□ -1.88
LCD1YDR499W NCE103P53615 221 aa3.31□□□□□ -1.88
LCD1YDR499W RLF2Q12495 606 aa3.31□□□□□ -1.88
LCD1YDR499W GLO3P38682 493 aaKnown RBP3.31□□□□□ -1.88
LCD1YDR499W KAR5Q04746 504 aa3.31□□□□□ -1.88
LCD1YDR499W PUB1P32588 453 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
LCD1YDR499W FET4P40988 552 aa3.3□□□□□ -1.88
LCD1YDR499W RPL34AP87262 121 aaPredicted RBP3.3□□□□□ -1.88
LCD1YDR499W BRE4Q07660 1125 aa3.3□□□□□ -1.88
LCD1YDR499W SPO74P45819 413 aa3.29□□□□□ -1.88
LCD1YDR499W YMR074CQ04773 145 aa3.29□□□□□ -1.88
LCD1YDR499W HVG1P0CE11 249 aa3.29□□□□□ -1.88
LCD1YDR499W QDR1P40475 563 aa3.29□□□□□ -1.88
LCD1YDR499W IRC24P40580 263 aa3.29□□□□□ -1.88
LCD1YDR499W CTR9P89105 1077 aa3.28□□□□□ -1.88
LCD1YDR499W SDH1Q00711 640 aa3.28□□□□□ -1.88
LCD1YDR499W MAG2Q06436 670 aaKnown RBP3.28□□□□□ -1.88
LCD1YDR499W GIC2Q06648 383 aa3.28□□□□□ -1.88
LCD1YDR499W FAR11P53917 953 aa3.28□□□□□ -1.88
LCD1YDR499W COBP00163 385 aa3.27□□□□□ -1.89
LCD1YDR499W MSB1P21339 1137 aaKnown RBP3.27□□□□□ -1.89
LCD1YDR499W ECM2P38241 364 aaKnown RBP3.27□□□□□ -1.89
LCD1YDR499W SEA4P38164 1038 aa3.26□□□□□ -1.89
LCD1YDR499W UFD2P54860 961 aa3.26□□□□□ -1.89
LCD1YDR499W YOR223WQ12015 292 aa3.26□□□□□ -1.89
LCD1YDR499W GCD1P09032 578 aaPredicted RBP3.25□□□□□ -1.89
LCD1YDR499W WHI3P34761 661 aaKnown RBP3.25□□□□□ -1.89
LCD1YDR499W GPT2P36148 743 aa3.25□□□□□ -1.89
LCD1YDR499W DUR3P33413 735 aa3.25□□□□□ -1.89
LCD1YDR499W NPR1P22211 790 aa3.24□□□□□ -1.89
LCD1YDR499W ATG1P53104 897 aa3.24□□□□□ -1.89
LCD1YDR499W RSC4Q02206 625 aa3.24□□□□□ -1.89
LCD1YDR499W DOT1Q04089 582 aaKnown RBP3.24□□□□□ -1.89
LCD1YDR499W CMR1Q12510 522 aaKnown RBP3.24□□□□□ -1.89
LCD1YDR499W MMM1P41800 426 aa3.24□□□□□ -1.89
LCD1YDR499W RIM11P38615 370 aa3.23□□□□□ -1.89
LCD1YDR499W YHL008CP38750 627 aa3.23□□□□□ -1.89
LCD1YDR499W TRS120Q04183 1289 aa3.23□□□□□ -1.89
LCD1YDR499W ALG6Q12001 544 aaKnown RBP3.23□□□□□ -1.89
LCD1YDR499W HTS1P07263 546 aaKnown RBP3.23□□□□□ -1.89
LCD1YDR499W GRS1P38088 690 aaKnown RBP3.23□□□□□ -1.89
LCD1YDR499W YNL011CP53980 444 aa3.23□□□□□ -1.89
LCD1YDR499W BSC2Q05611 235 aa3.23□□□□□ -1.89
LCD1YDR499W LRG1P35688 1017 aa3.22□□□□□ -1.89
LCD1YDR499W POL12P38121 705 aaPredicted RBP3.22□□□□□ -1.89
LCD1YDR499W CIT3P43635 486 aa3.22□□□□□ -1.89
LCD1YDR499W ACF4P47129 309 aa3.22□□□□□ -1.89
LCD1YDR499W GCV1P48015 400 aa3.22□□□□□ -1.89
LCD1YDR499W YIG1Q08956 461 aa3.22□□□□□ -1.89
LCD1YDR499W YLL054CQ12244 843 aa3.22□□□□□ -1.89
LCD1YDR499W SSA1P10591 642 aaKnown RBP3.21□□□□□ -1.89
LCD1YDR499W RNQ1P25367 405 aa3.21□□□□□ -1.89
LCD1YDR499W AOS1Q06624 347 aa3.21□□□□□ -1.89
LCD1YDR499W MNL2Q12205 849 aa3.21□□□□□ -1.89
LCD1YDR499W NSI1Q12457 570 aa3.21□□□□□ -1.89
LCD1YDR499W SEG2P34250 1132 aa3.21□□□□□ -1.9
LCD1YDR499W UTP22P53254 1237 aaPredicted RBP3.21□□□□□ -1.9
LCD1YDR499W RCM1P53972 490 aa3.21□□□□□ -1.9
LCD1YDR499W FLP1P03870 423 aa3.2□□□□□ -1.9
LCD1YDR499W TRL1P09880 827 aaKnown RBP3.2□□□□□ -1.9
LCD1YDR499W ELM1P32801 640 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms