RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene SLD5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD5	YDR489W	YHL050C	P38721	697 aa		5.01	□□□□□ -1.61
SLD5	YDR489W	YHR219W	P38900	624 aa		5.01	□□□□□ -1.61
SLD5	YDR489W	NUT2	Q06213	157 aa		5.01	□□□□□ -1.61
SLD5	YDR489W	MSC6	Q08818	692 aa	Known RBP	5.01	□□□□□ -1.61
SLD5	YDR489W	SLP1	Q12232	587 aa		5.01	□□□□□ -1.61
SLD5	YDR489W	FRT1	Q99332	602 aa		5.01	□□□□□ -1.61
SLD5	YDR489W	SEC20	P28791	383 aa		5	□□□□□ -1.61
SLD5	YDR489W	CHS2	P14180	963 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	RPC31	P17890	251 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	VMA3	P25515	160 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	ELM1	P32801	640 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	SAF1	P38352	637 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	IPL1	P38991	367 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	YGR130C	P53278	816 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	RRP15	Q06511	250 aa	Predicted RBP	4.99	□□□□□ -1.61
SLD5	YDR489W	BRE4	Q07660	1125 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	WHI5	Q12416	295 aa		4.99	□□□□□ -1.61
SLD5	YDR489W	TY4B-P	A0A0B7P3V8	1104 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	IDI1	P15496	288 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	HEM3	P28789	327 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	TRS120	Q04183	1289 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	MNL2	Q12205	849 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	TY4A-H	Q6Q5P6	413 aa		4.98	□□□□□ -1.61
SLD5	YDR489W	TY1A-NL1	Q12391	440 aa	Known RBP	4.97	□□□□□ -1.61
SLD5	YDR489W	QDR2	P40474	542 aa		4.96	□□□□□ -1.62
SLD5	YDR489W	GPI13	Q07830	1017 aa		4.96	□□□□□ -1.62
SLD5	YDR489W	NAM7	P30771	971 aa	Known RBP	4.95	□□□□□ -1.62
SLD5	YDR489W	GIP2	P40036	548 aa		4.95	□□□□□ -1.62
SLD5	YDR489W	TED1	P40533	473 aa		4.95	□□□□□ -1.62
SLD5	YDR489W	UFD2	P54860	961 aa		4.95	□□□□□ -1.62
SLD5	YDR489W	MAG2	Q06436	670 aa	Known RBP	4.95	□□□□□ -1.62
SLD5	YDR489W	MET4	P32389	672 aa		4.94	□□□□□ -1.62
SLD5	YDR489W	DYS1	P38791	387 aa		4.94	□□□□□ -1.62
SLD5	YDR489W	SUT1	P53032	299 aa	Known RBP	4.94	□□□□□ -1.62
SLD5	YDR489W	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
SLD5	YDR489W	CYC7	P00045	113 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	MSN1	P22148	382 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	LDH1	P38139	375 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	AKR1	P39010	764 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	UBP5	P39944	805 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	YER156C	P40093	338 aa	Known RBP	4.93	□□□□□ -1.62
SLD5	YDR489W	HXT8	P40886	569 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	RGD2	P43556	714 aa		4.93	□□□□□ -1.62
SLD5	YDR489W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SLD5	YDR489W	ATE1	P16639	503 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	SMC1	P32908	1225 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	NTA1	P40354	457 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	SPO74	P45819	413 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	SOK2	P53438	785 aa	Predicted RBP	4.92	□□□□□ -1.62
SLD5	YDR489W	DSE4	P53753	1117 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	RSC4	Q02206	625 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	YOR296W	Q08748	1289 aa		4.92	□□□□□ -1.62
SLD5	YDR489W	PHO4	P07270	312 aa	Known RBP	4.91	□□□□□ -1.62
SLD5	YDR489W	BSD2	P38356	321 aa		4.91	□□□□□ -1.62
SLD5	YDR489W	ASF1	P32447	279 aa		4.9	□□□□□ -1.63
SLD5	YDR489W	FIR1	P40020	876 aa		4.9	□□□□□ -1.63
SLD5	YDR489W	CDC55	Q00362	526 aa		4.9	□□□□□ -1.63
SLD5	YDR489W	REC8	Q12188	680 aa		4.9	□□□□□ -1.63
SLD5	YDR489W	RNQ1	P25367	405 aa		4.89	□□□□□ -1.63
SLD5	YDR489W	GIP1	P38229	639 aa		4.89	□□□□□ -1.63
SLD5	YDR489W	RAD55	P38953	406 aa		4.89	□□□□□ -1.63
SLD5	YDR489W	POL32	P47110	350 aa		4.89	□□□□□ -1.63
SLD5	YDR489W	YJR107W	P47145	328 aa		4.89	□□□□□ -1.63
SLD5	YDR489W	TIF6	Q12522	245 aa	Known RBP	4.89	□□□□□ -1.63
SLD5	YDR489W	IRS4	P36115	615 aa	Known RBP	4.88	□□□□□ -1.63
SLD5	YDR489W	ISW1	P38144	1129 aa		4.88	□□□□□ -1.63
SLD5	YDR489W	PSY2	P40164	858 aa		4.88	□□□□□ -1.63
SLD5	YDR489W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
SLD5	YDR489W	YBR287W	P38355	427 aa		4.87	□□□□□ -1.63
SLD5	YDR489W	PAM1	P37304	830 aa	Known RBP	4.86	□□□□□ -1.63
SLD5	YDR489W	THI12	P42883	340 aa		4.86	□□□□□ -1.63
SLD5	YDR489W	THI5	P43534	340 aa		4.86	□□□□□ -1.63
SLD5	YDR489W	THI11	P47183	340 aa		4.86	□□□□□ -1.63
SLD5	YDR489W	EMG1	Q06287	252 aa	Known RBP	4.86	□□□□□ -1.63
SLD5	YDR489W	RSC2	Q06488	889 aa		4.86	□□□□□ -1.63
SLD5	YDR489W	THI13	Q07748	340 aa		4.86	□□□□□ -1.63
SLD5	YDR489W	COB	P00163	385 aa		4.85	□□□□□ -1.63
SLD5	YDR489W	YIL165C	P40446	119 aa		4.85	□□□□□ -1.63
SLD5	YDR489W	YJL181W	P46987	611 aa		4.85	□□□□□ -1.63
SLD5	YDR489W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
SLD5	YDR489W	MSB1	P21339	1137 aa	Known RBP	4.84	□□□□□ -1.63
SLD5	YDR489W	VPS35	P34110	944 aa		4.84	□□□□□ -1.63
SLD5	YDR489W	FYV10	P40492	516 aa		4.84	□□□□□ -1.63
SLD5	YDR489W	DAK2	P43550	591 aa		4.84	□□□□□ -1.63
SLD5	YDR489W	SNU71	P53207	620 aa	Known RBP	4.84	□□□□□ -1.63
SLD5	YDR489W	BSC2	Q05611	235 aa		4.84	□□□□□ -1.63
SLD5	YDR489W	FLP1	P03870	423 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	GCD6	P32501	712 aa	Known RBP	4.83	□□□□□ -1.64
SLD5	YDR489W	SEG2	P34250	1132 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	PAN5	P38787	379 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	AIM46	P38885	310 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	SAM37	P50110	327 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	TOS4	Q06266	489 aa		4.83	□□□□□ -1.64
SLD5	YDR489W	LRG1	P35688	1017 aa		4.82	□□□□□ -1.64
SLD5	YDR489W	SEA4	P38164	1038 aa		4.82	□□□□□ -1.64
SLD5	YDR489W	PPT1	P53043	513 aa		4.82	□□□□□ -1.64
SLD5	YDR489W	MSH6	Q03834	1242 aa		4.82	□□□□□ -1.64
SLD5	YDR489W	PYC2	P32327	1180 aa	Known RBP	4.81	□□□□□ -1.64
SLD5	YDR489W	SEC8	P32855	1065 aa		4.81	□□□□□ -1.64
SLD5	YDR489W	RPT1	P33299	467 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms