RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	VNX1	P42839	908 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	SPC105	P53148	917 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	SPP1	Q03012	353 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	RNH1	Q04740	348 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	YDR286C	Q05530	114 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	RAD59	Q12223	238 aa		5.09	□□□□□ -1.6
SBE2	YDR351W	NUP120	P35729	1037 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	TRZ1	P36159	838 aa	Predicted RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	PGC1	Q08959	321 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	RUD3	Q12234	484 aa	Known RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	ADR1	P07248	1323 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	SRS2	P12954	1174 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	YEF3	P16521	1044 aa	Known RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	RGP1	P16664	663 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	RPL8A	P17076	256 aa	Known RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	UBP1	P25037	809 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	MRM1	P25270	412 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	SPT5	P27692	1063 aa	Known RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	IMP2'	P32351	346 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	YHR020W	P38708	688 aa	Known RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	VPS41	P38959	992 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	NIT1	P40447	199 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	AIM20	P40451	204 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	ATP22	P50273	684 aa	Predicted RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	ERO1	Q03103	563 aa		5.08	□□□□□ -1.6
SBE2	YDR351W	ISA1	Q07821	250 aa	Predicted RBP	5.08	□□□□□ -1.6
SBE2	YDR351W	TUF1	P02992	437 aa	Known RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	PET111	P08468	800 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	KEL2	P50090	882 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	MED1	Q12321	566 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	SST2	P11972	698 aa	Known RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	RPL5	P26321	297 aa	Known RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	THI4	P32318	326 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	ARC19	P33204	171 aa	Known RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	CCT3	P39077	534 aa	Known RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	PEX21	P50091	288 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	SPN1	Q06505	410 aa	Predicted RBP	5.07	□□□□□ -1.6
SBE2	YDR351W	REH1	Q06709	432 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	WSC3	Q12215	556 aa		5.07	□□□□□ -1.6
SBE2	YDR351W	RDS2	P19541	446 aa	Known RBP	5.06	□□□□□ -1.6
SBE2	YDR351W	TPD3	P31383	635 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	MRS6	P32864	603 aa	Known RBP	5.06	□□□□□ -1.6
SBE2	YDR351W	MNR2	P35724	969 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	UBX7	P38349	436 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	GTT3	P39996	337 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	DPH6	Q12429	685 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	GAL2	P13181	574 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	VMA8	P32610	256 aa	Known RBP	5.06	□□□□□ -1.6
SBE2	YDR351W	RTT105	P40063	208 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	ALA1	P40825	983 aa	Known RBP	5.06	□□□□□ -1.6
SBE2	YDR351W	RAD17	P48581	401 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	PIP2	P52960	996 aa		5.06	□□□□□ -1.6
SBE2	YDR351W	MEF2	P39677	819 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	GCD10	P41814	478 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	YML131W	Q03102	365 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	BUL2	Q03758	920 aa	Known RBP	5.05	□□□□□ -1.6
SBE2	YDR351W	RAD33	Q04231	177 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	PSR2	Q07949	397 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	ALR1	Q08269	859 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	REC8	Q12188	680 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	EDS1	P38073	919 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
SBE2	YDR351W	MNT3	P40549	630 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	COG6	P53959	839 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	YLL054C	Q12244	843 aa		5.05	□□□□□ -1.6
SBE2	YDR351W	CDC60	P26637	1090 aa	Known RBP	5.04	□□□□□ -1.6
SBE2	YDR351W	IRR1	P40541	1150 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	FOX2	Q02207	900 aa	Known RBP	5.04	□□□□□ -1.6
SBE2	YDR351W	MDM38	Q08179	573 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	SDH5	Q08230	162 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	PGS1	P25578	521 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	PTH2	P34222	208 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	MOT2	P34909	587 aa	Known RBP	5.04	□□□□□ -1.6
SBE2	YDR351W	TBS1	P38114	1094 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	QDR1	P40475	563 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	SGM1	P47166	707 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	YGR237C	P50089	785 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	UBA2	P52488	636 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	YNL034W	P53963	612 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	YNL018C	P53976	612 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	PNP1	Q05788	311 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	MPD2	Q99316	277 aa		5.04	□□□□□ -1.6
SBE2	YDR351W	PHO4	P07270	312 aa	Known RBP	5.03	□□□□□ -1.6
SBE2	YDR351W	ATG19	P35193	415 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	RPC37	P36121	282 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	YGR130C	P53278	816 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SBE2	YDR351W	NSE5	Q03718	556 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	SAS4	Q04003	481 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	SMD2	Q06217	110 aa	Known RBP	5.03	□□□□□ -1.6
SBE2	YDR351W	ARV1	Q06541	321 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	ATG13	Q06628	738 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	ETT1	Q08421	412 aa	Known RBP	5.03	□□□□□ -1.6
SBE2	YDR351W	CLP1	Q08685	445 aa	Predicted RBP	5.03	□□□□□ -1.6
SBE2	YDR351W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SBE2	YDR351W	RRP36	Q12481	300 aa	Predicted RBP	5.03	□□□□□ -1.6
SBE2	YDR351W	DAL80	P26343	269 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	GUT1	P32190	709 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	YJL171C	P46992	396 aa		5.03	□□□□□ -1.6
SBE2	YDR351W	HST2	P53686	357 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms