RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YBL036C	P38197	257 aa		5.67	□□□□□ -1.5
SUP35	YDR172W	RRD1	P40454	393 aa	Known RBP	5.67	□□□□□ -1.5
SUP35	YDR172W	DOT5	P40553	215 aa		5.67	□□□□□ -1.5
SUP35	YDR172W	YBP2	P53169	641 aa		5.67	□□□□□ -1.5
SUP35	YDR172W	FOX2	Q02207	900 aa	Known RBP	5.67	□□□□□ -1.5
SUP35	YDR172W	COB	P00163	385 aa		5.66	□□□□□ -1.5
SUP35	YDR172W	PCT1	P13259	424 aa		5.66	□□□□□ -1.5
SUP35	YDR172W	RLF2	Q12495	606 aa		5.66	□□□□□ -1.5
SUP35	YDR172W	BOI2	P39969	1040 aa		5.65	□□□□□ -1.5
SUP35	YDR172W	HGH1	P48362	394 aa	Known RBP	5.65	□□□□□ -1.5
SUP35	YDR172W	RMT2	Q03305	412 aa		5.65	□□□□□ -1.5
SUP35	YDR172W	BIO2	P32451	375 aa		5.65	□□□□□ -1.51
SUP35	YDR172W	NUP133	P36161	1157 aa		5.65	□□□□□ -1.51
SUP35	YDR172W	SWI1	P09547	1314 aa		5.64	□□□□□ -1.51
SUP35	YDR172W	GCD7	P32502	381 aa	Predicted RBP	5.64	□□□□□ -1.51
SUP35	YDR172W	APL2	P36000	726 aa	Predicted RBP	5.64	□□□□□ -1.51
SUP35	YDR172W	BRN1	P38170	754 aa		5.64	□□□□□ -1.51
SUP35	YDR172W	DJP1	P40564	432 aa		5.64	□□□□□ -1.51
SUP35	YDR172W	VPS64	Q03944	604 aa		5.64	□□□□□ -1.51
SUP35	YDR172W	RAD50	P12753	1312 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	DLD1	P32891	587 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	PRP40	P33203	583 aa	Known RBP	5.63	□□□□□ -1.51
SUP35	YDR172W	DNM1	P54861	757 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	PUS5	Q06244	254 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	UTP10	P42945	1769 aa	Known RBP	5.63	□□□□□ -1.51
SUP35	YDR172W	YKR075C	P36155	307 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	YJL181W	P46987	611 aa		5.63	□□□□□ -1.51
SUP35	YDR172W	EAF7	P53911	425 aa	Known RBP	5.63	□□□□□ -1.51
SUP35	YDR172W	ECM16	Q04217	1267 aa	Known RBP	5.63	□□□□□ -1.51
SUP35	YDR172W	LPD1	P09624	499 aa	Known RBP	5.62	□□□□□ -1.51
SUP35	YDR172W	YJL007C	P47080	104 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	CLA4	P48562	842 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	GCR2	Q01722	534 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	GRX1	P25373	110 aa	Known RBP	5.62	□□□□□ -1.51
SUP35	YDR172W	HXT13	P39924	564 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	FIG4	P42837	879 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	RPN11	P43588	306 aa	Known RBP	5.62	□□□□□ -1.51
SUP35	YDR172W	HXT17	P53631	564 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	RMD1	Q03441	430 aa		5.62	□□□□□ -1.51
SUP35	YDR172W	CDC16	P09798	840 aa		5.61	□□□□□ -1.51
SUP35	YDR172W	CLC1	P17891	233 aa		5.61	□□□□□ -1.51
SUP35	YDR172W	UBP12	P39538	1254 aa		5.61	□□□□□ -1.51
SUP35	YDR172W	BIM1	P40013	344 aa		5.61	□□□□□ -1.51
SUP35	YDR172W	SSP2	Q08646	371 aa		5.61	□□□□□ -1.51
SUP35	YDR172W	YDJ1	P25491	409 aa	Known RBP	5.6	□□□□□ -1.51
SUP35	YDR172W	VAC17	P25591	423 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	YJR008W	P47085	338 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	YMR074C	Q04773	145 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	YPR204W	Q08995	1032 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	MDG1	P53885	366 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	NAF1	P53919	492 aa	Known RBP	5.6	□□□□□ -1.51
SUP35	YDR172W	FCP1	Q03254	732 aa		5.6	□□□□□ -1.51
SUP35	YDR172W	VAS1	P07806	1104 aa	Known RBP	5.59	□□□□□ -1.51
SUP35	YDR172W	SPT5	P27692	1063 aa	Known RBP	5.59	□□□□□ -1.51
SUP35	YDR172W	SLA1	P32790	1244 aa		5.59	□□□□□ -1.51
SUP35	YDR172W	SNF7	P39929	240 aa	Known RBP	5.59	□□□□□ -1.51
SUP35	YDR172W	ATG32	P40458	529 aa		5.59	□□□□□ -1.51
SUP35	YDR172W	YPR084W	Q06821	456 aa		5.59	□□□□□ -1.51
SUP35	YDR172W	SUP45	P12385	437 aa	Known RBP	5.59	□□□□□ -1.52
SUP35	YDR172W	UBP1	P25037	809 aa		5.59	□□□□□ -1.52
SUP35	YDR172W	YNL108C	P53929	270 aa		5.59	□□□□□ -1.52
SUP35	YDR172W	ROX1	P25042	368 aa		5.58	□□□□□ -1.52
SUP35	YDR172W	VPS24	P36095	224 aa	Known RBP	5.58	□□□□□ -1.52
SUP35	YDR172W	KTR3	P38130	404 aa	Predicted RBP	5.58	□□□□□ -1.52
SUP35	YDR172W	PKH1	Q03407	766 aa		5.58	□□□□□ -1.52
SUP35	YDR172W	NOT3	P06102	836 aa	Known RBP	5.57	□□□□□ -1.52
SUP35	YDR172W	SRS2	P12954	1174 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	TEC1	P18412	486 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	AIR1	P40507	360 aa	Known RBP	5.57	□□□□□ -1.52
SUP35	YDR172W	ITC1	P53125	1264 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	HED1	Q03937	162 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	PHM7	Q12252	991 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	TRL1	P09880	827 aa	Known RBP	5.57	□□□□□ -1.52
SUP35	YDR172W	ECM21	P38167	1117 aa	Known RBP	5.57	□□□□□ -1.52
SUP35	YDR172W	NPR2	P39923	615 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	YGL082W	P53155	381 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	ALO1	P54783	526 aa	Known RBP	5.57	□□□□□ -1.52
SUP35	YDR172W	SRC1	Q03707	834 aa		5.57	□□□□□ -1.52
SUP35	YDR172W	MSP1	P28737	362 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	PIB2	P53191	635 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	MRPS35	P53292	345 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	SYH1	Q02875	849 aa	Known RBP	5.56	□□□□□ -1.52
SUP35	YDR172W	PSH1	Q12161	406 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	NCB2	Q92317	146 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	PDR18	P53756	1333 aa		5.56	□□□□□ -1.52
SUP35	YDR172W	ENO2	P00925	437 aa	Known RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	TIF1	P10081	395 aa	Known RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	SER1	P33330	395 aa	Known RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	IXR1	P33417	597 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	NPA3	P47122	385 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	YGL242C	P53066	181 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	RIM20	Q12033	661 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	LSP1	Q12230	341 aa	Known RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	DUR1,2	P32528	1835 aa	Known RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	KIP2	P28743	706 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	VPS20	Q04272	221 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	FPR4	Q06205	392 aa	Predicted RBP	5.55	□□□□□ -1.52
SUP35	YDR172W	MCM16	Q12262	181 aa		5.55	□□□□□ -1.52
SUP35	YDR172W	AAP1	P37898	856 aa	Known RBP	5.54	□□□□□ -1.52
SUP35	YDR172W	SSF1	P38789	453 aa	Predicted RBP	5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 106.1 ms