RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeast

Gene RUB1, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUB1	YDR139C	CDC55	Q00362	526 aa		5.89	□□□□□ -1.47
RUB1	YDR139C	THI13	Q07748	340 aa		5.89	□□□□□ -1.47
RUB1	YDR139C	PRK1	P40494	810 aa		5.88	□□□□□ -1.47
RUB1	YDR139C	GPM1	P00950	247 aa	Known RBP	5.87	□□□□□ -1.47
RUB1	YDR139C	HEM3	P28789	327 aa		5.87	□□□□□ -1.47
RUB1	YDR139C	PPT1	P53043	513 aa		5.87	□□□□□ -1.47
RUB1	YDR139C	BSC2	Q05611	235 aa		5.87	□□□□□ -1.47
RUB1	YDR139C	GPI13	Q07830	1017 aa		5.87	□□□□□ -1.47
RUB1	YDR139C	WHI5	Q12416	295 aa		5.87	□□□□□ -1.47
RUB1	YDR139C	PDC5	P16467	563 aa	Known RBP	5.86	□□□□□ -1.47
RUB1	YDR139C	KNS1	P32350	737 aa	Predicted RBP	5.86	□□□□□ -1.47
RUB1	YDR139C	BOI2	P39969	1040 aa		5.86	□□□□□ -1.47
RUB1	YDR139C	PRY1	P47032	299 aa		5.86	□□□□□ -1.47
RUB1	YDR139C	SAM37	P50110	327 aa		5.85	□□□□□ -1.47
RUB1	YDR139C	MET4	P32389	672 aa		5.84	□□□□□ -1.47
RUB1	YDR139C	MCX1	P38323	520 aa	Predicted RBP	5.84	□□□□□ -1.47
RUB1	YDR139C	NOC3	Q07896	663 aa	Predicted RBP	5.84	□□□□□ -1.47
RUB1	YDR139C	PYC2	P32327	1180 aa	Known RBP	5.83	□□□□□ -1.48
RUB1	YDR139C	GCD6	P32501	712 aa	Known RBP	5.83	□□□□□ -1.48
RUB1	YDR139C	ECM2	P38241	364 aa	Known RBP	5.83	□□□□□ -1.48
RUB1	YDR139C	CIC1	P38779	376 aa	Known RBP	5.83	□□□□□ -1.48
RUB1	YDR139C	YJL181W	P46987	611 aa		5.83	□□□□□ -1.48
RUB1	YDR139C	FUS1	P11710	512 aa		5.82	□□□□□ -1.48
RUB1	YDR139C	YHL008C	P38750	627 aa		5.82	□□□□□ -1.48
RUB1	YDR139C	LSB6	P42951	607 aa		5.82	□□□□□ -1.48
RUB1	YDR139C	PHO4	P07270	312 aa	Known RBP	5.81	□□□□□ -1.48
RUB1	YDR139C	ASF1	P32447	279 aa		5.81	□□□□□ -1.48
RUB1	YDR139C	VPS35	P34110	944 aa		5.81	□□□□□ -1.48
RUB1	YDR139C	INP51	P40559	946 aa	Known RBP	5.81	□□□□□ -1.48
RUB1	YDR139C	POL32	P47110	350 aa		5.81	□□□□□ -1.48
RUB1	YDR139C	CTR9	P89105	1077 aa		5.81	□□□□□ -1.48
RUB1	YDR139C	MRP10	O75012	95 aa		5.8	□□□□□ -1.48
RUB1	YDR139C	FLP1	P03870	423 aa		5.8	□□□□□ -1.48
RUB1	YDR139C	MET1	P36150	593 aa		5.8	□□□□□ -1.48
RUB1	YDR139C	ALD3	P54114	506 aa		5.8	□□□□□ -1.48
RUB1	YDR139C	INP54	Q08227	384 aa	Known RBP	5.8	□□□□□ -1.48
RUB1	YDR139C	ALO1	P54783	526 aa	Known RBP	5.79	□□□□□ -1.48
RUB1	YDR139C	COB	P00163	385 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	NAR1	P23503	491 aa	Known RBP	5.78	□□□□□ -1.48
RUB1	YDR139C	ALG14	P38242	237 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	MGE1	P38523	228 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	DAK2	P43550	591 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	BIO5	P53744	561 aa	Known RBP	5.78	□□□□□ -1.48
RUB1	YDR139C	MSH6	Q03834	1242 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	GIS4	Q04233	774 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	SOG2	Q08817	791 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	GLO4	Q12320	285 aa		5.78	□□□□□ -1.48
RUB1	YDR139C	PGM2	P37012	569 aa	Known RBP	5.77	□□□□□ -1.49
RUB1	YDR139C	OXR1	Q08952	273 aa		5.77	□□□□□ -1.49
RUB1	YDR139C	SLP1	Q12232	587 aa		5.77	□□□□□ -1.49
RUB1	YDR139C	ATE1	P16639	503 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	RPT1	P33299	467 aa	Known RBP	5.76	□□□□□ -1.49
RUB1	YDR139C	TFA2	P36145	328 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	LEM3	P42838	414 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	GUP1	P53154	560 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	YCS4	Q06156	1176 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	RRP15	Q06511	250 aa	Predicted RBP	5.76	□□□□□ -1.49
RUB1	YDR139C	NHA1	Q99271	985 aa		5.76	□□□□□ -1.49
RUB1	YDR139C	YJR124C	P47159	448 aa		5.75	□□□□□ -1.49
RUB1	YDR139C	NUT1	P53114	1132 aa		5.75	□□□□□ -1.49
RUB1	YDR139C	SOK2	P53438	785 aa	Predicted RBP	5.75	□□□□□ -1.49
RUB1	YDR139C	PMT7	Q06644	662 aa		5.75	□□□□□ -1.49
RUB1	YDR139C	HVG1	P0CE11	249 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	DUR3	P33413	735 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	TAT1	P38085	619 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	RIM11	P38615	370 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	GIP2	P40036	548 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	FET4	P40988	552 aa		5.74	□□□□□ -1.49
RUB1	YDR139C	KAR2	P16474	682 aa	Known RBP	5.73	□□□□□ -1.49
RUB1	YDR139C	MAC1	P35192	417 aa		5.73	□□□□□ -1.49
RUB1	YDR139C	RVS167	P39743	482 aa	Known RBP	5.73	□□□□□ -1.49
RUB1	YDR139C	SAP155	P43612	1002 aa		5.73	□□□□□ -1.49
RUB1	YDR139C	MON1	P53129	644 aa		5.73	□□□□□ -1.49
RUB1	YDR139C	CMR1	Q12510	522 aa	Known RBP	5.73	□□□□□ -1.49
RUB1	YDR139C	NPR1	P22211	790 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	PRP40	P33203	583 aa	Known RBP	5.72	□□□□□ -1.49
RUB1	YDR139C	NEO1	P40527	1151 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	TED1	P40533	473 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	YJR107W	P47145	328 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	YNR065C	P53751	1116 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	DAL4	Q04895	635 aa		5.72	□□□□□ -1.49
RUB1	YDR139C	PRP5	P21372	849 aa	Predicted RBP	5.71	□□□□□ -1.5
RUB1	YDR139C	MCM5	P29496	775 aa	Known RBP	5.71	□□□□□ -1.5
RUB1	YDR139C	YAF9	P53930	226 aa		5.71	□□□□□ -1.5
RUB1	YDR139C	PAN5	P38787	379 aa		5.7	□□□□□ -1.5
RUB1	YDR139C	HAS1	Q03532	505 aa	Known RBP	5.7	□□□□□ -1.5
RUB1	YDR139C	SPO71	Q03868	1245 aa		5.7	□□□□□ -1.5
RUB1	YDR139C	TY4B-P	A0A0B7P3V8	1104 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	SAC7	P17121	654 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	SEC8	P32855	1065 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	YGR122W	P53272	402 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	TOS4	Q06266	489 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	TY4A-H	Q6Q5P6	413 aa		5.69	□□□□□ -1.5
RUB1	YDR139C	HXK1	P04806	485 aa	Known RBP	5.68	□□□□□ -1.5
RUB1	YDR139C	RRM3	P38766	723 aa		5.68	□□□□□ -1.5
RUB1	YDR139C	SHU2	P38957	223 aa		5.68	□□□□□ -1.5
RUB1	YDR139C	FAA3	P39002	694 aa		5.68	□□□□□ -1.5
RUB1	YDR139C	ULP1	Q02724	621 aa		5.68	□□□□□ -1.5
RUB1	YDR139C	YPL034W	Q03083	165 aa		5.68	□□□□□ -1.5
RUB1	YDR139C	OYE2	Q03558	400 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms