RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W SIS2P36024 562 aa2.46□□□□□ -2.01
TRM3YDL112W APC1P53886 1748 aa2.46□□□□□ -2.01
TRM3YDL112W CDC4P07834 779 aa2.46□□□□□ -2.02
TRM3YDL112W PEP12P32854 288 aa2.46□□□□□ -2.02
TRM3YDL112W EMW1P42842 904 aaKnown RBP2.46□□□□□ -2.02
TRM3YDL112W GCR2Q01722 534 aa2.46□□□□□ -2.02
TRM3YDL112W ENT1Q12518 454 aa2.46□□□□□ -2.02
TRM3YDL112W RAD9P14737 1309 aa2.46□□□□□ -2.02
TRM3YDL112W RRN6P32786 894 aa2.46□□□□□ -2.02
TRM3YDL112W TCB1Q12466 1186 aa2.46□□□□□ -2.02
TRM3YDL112W QDR1P40475 563 aa2.46□□□□□ -2.02
TRM3YDL112W YEF3P16521 1044 aaKnown RBP2.45□□□□□ -2.02
TRM3YDL112W NAP1P25293 417 aaKnown RBP2.45□□□□□ -2.02
TRM3YDL112W PAF1P38351 445 aa2.45□□□□□ -2.02
TRM3YDL112W BOL3P39724 118 aa2.45□□□□□ -2.02
TRM3YDL112W PRP43P53131 767 aaKnown RBP2.45□□□□□ -2.02
TRM3YDL112W YIL177CP40434 1758 aa2.45□□□□□ -2.02
TRM3YDL112W YJL225CP40889 1758 aa2.45□□□□□ -2.02
TRM3YDL112W UBP1P25037 809 aa2.45□□□□□ -2.02
TRM3YDL112W RIM15P43565 1770 aa2.45□□□□□ -2.02
TRM3YDL112W BRE2P43132 505 aa2.45□□□□□ -2.02
TRM3YDL112W RSF2P46974 1380 aa2.45□□□□□ -2.02
TRM3YDL112W MLF3P32047 452 aa2.44□□□□□ -2.02
TRM3YDL112W AAD14P42884 376 aa2.44□□□□□ -2.02
TRM3YDL112W STB3Q12427 513 aa2.44□□□□□ -2.02
TRM3YDL112W YLL066CQ99208 1374 aa2.44□□□□□ -2.02
TRM3YDL112W FIR1P40020 876 aa2.44□□□□□ -2.02
TRM3YDL112W LSC2P53312 427 aa2.44□□□□□ -2.02
TRM3YDL112W POL32P47110 350 aa2.44□□□□□ -2.02
TRM3YDL112W YLR419WQ06698 1435 aaKnown RBP2.43□□□□□ -2.02
TRM3YDL112W YBL086CP38177 466 aa2.43□□□□□ -2.02
TRM3YDL112W QDR2P40474 542 aa2.43□□□□□ -2.02
TRM3YDL112W CWC24P53769 259 aa2.43□□□□□ -2.02
TRM3YDL112W OYE2Q03558 400 aaKnown RBP2.43□□□□□ -2.02
TRM3YDL112W MON1P53129 644 aa2.43□□□□□ -2.02
TRM3YDL112W CAF120P53836 1060 aa2.43□□□□□ -2.02
TRM3YDL112W SRS2P12954 1174 aa2.42□□□□□ -2.02
TRM3YDL112W MCM2P29469 868 aa2.42□□□□□ -2.02
TRM3YDL112W SCT1P32784 759 aa2.42□□□□□ -2.02
TRM3YDL112W ESL2P36168 1195 aa2.42□□□□□ -2.02
TRM3YDL112W SSF1P38789 453 aaPredicted RBP2.42□□□□□ -2.02
TRM3YDL112W YHL008CP38750 627 aa2.42□□□□□ -2.02
TRM3YDL112W YNL165WP53891 406 aa2.42□□□□□ -2.02
TRM3YDL112W CAB1Q04430 367 aa2.42□□□□□ -2.02
TRM3YDL112W YLR346CQ06139 101 aa2.42□□□□□ -2.02
TRM3YDL112W SPT7P35177 1332 aa2.42□□□□□ -2.02
TRM3YDL112W DED1P06634 604 aaKnown RBP2.41□□□□□ -2.02
TRM3YDL112W BSD2P38356 321 aa2.41□□□□□ -2.02
TRM3YDL112W SUM1P46676 1062 aa2.41□□□□□ -2.02
TRM3YDL112W YMR265CQ03508 461 aaKnown RBP2.41□□□□□ -2.02
TRM3YDL112W PUF6Q04373 656 aaKnown RBP2.41□□□□□ -2.02
TRM3YDL112W SIR4P11978 1358 aa2.41□□□□□ -2.02
TRM3YDL112W PRP5P21372 849 aaPredicted RBP2.41□□□□□ -2.02
TRM3YDL112W BOI1P38041 980 aaKnown RBP2.41□□□□□ -2.02
TRM3YDL112W MRPL16P38064 232 aa2.41□□□□□ -2.02
TRM3YDL112W UGA2P38067 497 aa2.41□□□□□ -2.02
TRM3YDL112W LDH1P38139 375 aa2.41□□□□□ -2.02
TRM3YDL112W YBR197CP38306 217 aa2.41□□□□□ -2.02
TRM3YDL112W AFT1P22149 690 aa2.4□□□□□ -2.02
TRM3YDL112W SCW11P53189 542 aa2.4□□□□□ -2.02
TRM3YDL112W OPT2Q06593 877 aa2.4□□□□□ -2.02
TRM3YDL112W MLP1Q02455 1875 aaKnown RBP2.4□□□□□ -2.02
TRM3YDL112W YJR098CP47139 656 aa2.4□□□□□ -2.03
TRM3YDL112W ALD2P47771 506 aa2.4□□□□□ -2.03
TRM3YDL112W RPT1P33299 467 aaKnown RBP2.4□□□□□ -2.03
TRM3YDL112W YDR444WQ04093 687 aa2.4□□□□□ -2.03
TRM3YDL112W YNR063WP53749 607 aa2.39□□□□□ -2.03
TRM3YDL112W SPR28Q04921 423 aa2.39□□□□□ -2.03
TRM3YDL112W NUT2Q06213 157 aa2.39□□□□□ -2.03
TRM3YDL112W SLM3Q12093 417 aa2.39□□□□□ -2.03
TRM3YDL112W UTP10P42945 1769 aaKnown RBP2.39□□□□□ -2.03
TRM3YDL112W STE6P12866 1290 aa2.39□□□□□ -2.03
TRM3YDL112W MET1P36150 593 aa2.39□□□□□ -2.03
TRM3YDL112W STM1P39015 273 aaKnown RBP2.39□□□□□ -2.03
TRM3YDL112W NPR2P39923 615 aa2.39□□□□□ -2.03
TRM3YDL112W DOT5P40553 215 aa2.39□□□□□ -2.03
TRM3YDL112W NOP7P53261 605 aaKnown RBP2.39□□□□□ -2.03
TRM3YDL112W CWC15Q03772 175 aaKnown RBP2.39□□□□□ -2.03
TRM3YDL112W FRT1Q99332 602 aa2.39□□□□□ -2.03
TRM3YDL112W PRP45P28004 379 aaPredicted RBP2.38□□□□□ -2.03
TRM3YDL112W IRE1P32361 1115 aa2.38□□□□□ -2.03
TRM3YDL112W SUV3P32580 737 aa2.38□□□□□ -2.03
TRM3YDL112W RAD55P38953 406 aa2.38□□□□□ -2.03
TRM3YDL112W JJJ2P46997 583 aa2.38□□□□□ -2.03
TRM3YDL112W MTR4P47047 1073 aaKnown RBP2.38□□□□□ -2.03
TRM3YDL112W TAF5P38129 798 aa2.38□□□□□ -2.03
TRM3YDL112W MGE1P38523 228 aa2.38□□□□□ -2.03
TRM3YDL112W CTH1P47976 325 aa2.38□□□□□ -2.03
TRM3YDL112W KRE33P53914 1056 aaKnown RBP2.38□□□□□ -2.03
TRM3YDL112W VMA3P25515 160 aa2.37□□□□□ -2.03
TRM3YDL112W PRP40P33203 583 aaKnown RBP2.37□□□□□ -2.03
TRM3YDL112W MAD1P40957 749 aa2.37□□□□□ -2.03
TRM3YDL112W UTP13Q05946 817 aaKnown RBP2.37□□□□□ -2.03
TRM3YDL112W MRPL33P20084 86 aa2.37□□□□□ -2.03
TRM3YDL112W PPH3P32345 308 aa2.37□□□□□ -2.03
TRM3YDL112W YKR075CP36155 307 aa2.37□□□□□ -2.03
TRM3YDL112W MDJ2P42834 146 aa2.37□□□□□ -2.03
TRM3YDL112W RPN11P43588 306 aaKnown RBP2.37□□□□□ -2.03
TRM3YDL112W ADE12P80210 433 aaKnown RBP2.37□□□□□ -2.03
TRM3YDL112W RPS9BP05755 195 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms