RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W PUN1Q06991 263 aa3.92□□□□□ -1.78
MCD1YDL003W RNQ1P25367 405 aa3.92□□□□□ -1.78
MCD1YDL003W BIO5P53744 561 aaKnown RBP3.92□□□□□ -1.78
MCD1YDL003W GIC2Q06648 383 aa3.92□□□□□ -1.78
MCD1YDL003W NSI1Q12457 570 aa3.92□□□□□ -1.78
MCD1YDL003W AIM46P38885 310 aa3.91□□□□□ -1.78
MCD1YDL003W NEO1P40527 1151 aa3.91□□□□□ -1.78
MCD1YDL003W NCE103P53615 221 aa3.91□□□□□ -1.78
MCD1YDL003W POL5P39985 1022 aaKnown RBP3.9□□□□□ -1.78
MCD1YDL003W ALD4P46367 519 aaKnown RBP3.9□□□□□ -1.78
MCD1YDL003W SDH1Q00711 640 aa3.9□□□□□ -1.78
MCD1YDL003W EMG1Q06287 252 aaKnown RBP3.9□□□□□ -1.78
MCD1YDL003W SOG2Q08817 791 aa3.9□□□□□ -1.78
MCD1YDL003W ELG1Q12050 791 aa3.9□□□□□ -1.78
MCD1YDL003W TTI1P36097 1038 aa3.9□□□□□ -1.79
MCD1YDL003W SEG2P34250 1132 aa3.89□□□□□ -1.79
MCD1YDL003W POL12P38121 705 aaPredicted RBP3.89□□□□□ -1.79
MCD1YDL003W HXT8P40886 569 aa3.88□□□□□ -1.79
MCD1YDL003W ECL1P48235 211 aa3.88□□□□□ -1.79
MCD1YDL003W KIP3P53086 805 aaKnown RBP3.88□□□□□ -1.79
MCD1YDL003W PUF6Q04373 656 aaKnown RBP3.88□□□□□ -1.79
MCD1YDL003W FUS1P11710 512 aa3.87□□□□□ -1.79
MCD1YDL003W LRG1P35688 1017 aa3.87□□□□□ -1.79
MCD1YDL003W FAR11P53917 953 aa3.87□□□□□ -1.79
MCD1YDL003W YKL222CP35995 705 aa3.87□□□□□ -1.79
MCD1YDL003W ALD3P54114 506 aa3.87□□□□□ -1.79
MCD1YDL003W YMR074CQ04773 145 aa3.87□□□□□ -1.79
MCD1YDL003W TFA2P36145 328 aa3.86□□□□□ -1.79
MCD1YDL003W NIT1P40447 199 aa3.86□□□□□ -1.79
MCD1YDL003W PRP43P53131 767 aaKnown RBP3.86□□□□□ -1.79
MCD1YDL003W DFG16Q99234 619 aa3.86□□□□□ -1.79
MCD1YDL003W GCD1P09032 578 aaPredicted RBP3.85□□□□□ -1.79
MCD1YDL003W SRS2P12954 1174 aa3.85□□□□□ -1.79
MCD1YDL003W ERS1P17261 260 aa3.85□□□□□ -1.79
MCD1YDL003W CPS1P27614 576 aa3.85□□□□□ -1.79
MCD1YDL003W RRN6P32786 894 aa3.85□□□□□ -1.79
MCD1YDL003W MMM1P41800 426 aa3.85□□□□□ -1.79
MCD1YDL003W YJR124CP47159 448 aa3.85□□□□□ -1.79
MCD1YDL003W SUT1P53032 299 aaKnown RBP3.84□□□□□ -1.79
MCD1YDL003W YNR065CP53751 1116 aa3.84□□□□□ -1.79
MCD1YDL003W GAS1P22146 559 aaKnown RBP3.84□□□□□ -1.8
MCD1YDL003W BOI1P38041 980 aaKnown RBP3.84□□□□□ -1.8
MCD1YDL003W CIT3P43635 486 aa3.84□□□□□ -1.8
MCD1YDL003W SEA4P38164 1038 aa3.83□□□□□ -1.8
MCD1YDL003W RGD2P43556 714 aa3.83□□□□□ -1.8
MCD1YDL003W YOR223WQ12015 292 aa3.83□□□□□ -1.8
MCD1YDL003W YLL054CQ12244 843 aa3.83□□□□□ -1.8
MCD1YDL003W WHI3P34761 661 aaKnown RBP3.82□□□□□ -1.8
MCD1YDL003W RAD55P38953 406 aa3.82□□□□□ -1.8
MCD1YDL003W RCM1P53972 490 aa3.82□□□□□ -1.8
MCD1YDL003W HAS1Q03532 505 aaKnown RBP3.82□□□□□ -1.8
MCD1YDL003W YCR015CP25616 317 aa3.81□□□□□ -1.8
MCD1YDL003W NTA1P40354 457 aa3.81□□□□□ -1.8
MCD1YDL003W FET4P40988 552 aa3.81□□□□□ -1.8
MCD1YDL003W YOR059CQ08448 450 aaKnown RBP3.81□□□□□ -1.8
MCD1YDL003W PUP1P25043 261 aa3.81□□□□□ -1.8
MCD1YDL003W GPT2P36148 743 aa3.81□□□□□ -1.8
MCD1YDL003W YHL008CP38750 627 aa3.81□□□□□ -1.8
MCD1YDL003W GLO4Q12320 285 aa3.8□□□□□ -1.8
MCD1YDL003W SMC1P32908 1225 aa3.79□□□□□ -1.8
MCD1YDL003W HSP78P33416 811 aa3.79□□□□□ -1.8
MCD1YDL003W IRS4P36115 615 aaKnown RBP3.79□□□□□ -1.8
MCD1YDL003W TIF6Q12522 245 aaKnown RBP3.79□□□□□ -1.8
MCD1YDL003W PSY2P40164 858 aa3.78□□□□□ -1.8
MCD1YDL003W DOT1Q04089 582 aaKnown RBP3.78□□□□□ -1.8
MCD1YDL003W ESC8Q08119 714 aa3.78□□□□□ -1.8
MCD1YDL003W PNP1Q05788 311 aa3.78□□□□□ -1.8
MCD1YDL003W ADP1P25371 1049 aa3.77□□□□□ -1.81
MCD1YDL003W PYC2P32327 1180 aaKnown RBP3.77□□□□□ -1.81
MCD1YDL003W ECM2P38241 364 aaKnown RBP3.77□□□□□ -1.81
MCD1YDL003W CWC15Q03772 175 aaKnown RBP3.77□□□□□ -1.81
MCD1YDL003W MSH6Q03834 1242 aa3.76□□□□□ -1.81
MCD1YDL003W HVG1P0CE11 249 aa3.75□□□□□ -1.81
MCD1YDL003W RPS4AP0CX35 261 aaKnown RBP3.75□□□□□ -1.81
MCD1YDL003W RPS4BP0CX36 261 aaKnown RBP3.75□□□□□ -1.81
MCD1YDL003W GIP4P39732 760 aa3.75□□□□□ -1.81
MCD1YDL003W FUR4P05316 633 aaKnown RBP3.75□□□□□ -1.81
MCD1YDL003W TAF1P46677 1066 aa3.74□□□□□ -1.81
MCD1YDL003W APC11Q12157 165 aa3.74□□□□□ -1.81
MCD1YDL003W GCV1P48015 400 aa3.73□□□□□ -1.81
MCD1YDL003W SSY1Q03770 852 aa3.73□□□□□ -1.81
MCD1YDL003W RPB10P22139 70 aa3.73□□□□□ -1.81
MCD1YDL003W SSA4P22202 642 aaKnown RBP3.73□□□□□ -1.81
MCD1YDL003W OYE3P41816 400 aaPredicted RBP3.73□□□□□ -1.81
MCD1YDL003W YML083CQ04526 418 aa3.73□□□□□ -1.81
MCD1YDL003W CDA2Q06703 312 aa3.73□□□□□ -1.81
MCD1YDL003W TRE1Q08919 783 aa3.73□□□□□ -1.81
MCD1YDL003W LSO1Q3E827 93 aa3.73□□□□□ -1.81
MCD1YDL003W PRO1P32264 428 aa3.71□□□□□ -1.82
MCD1YDL003W KTR2P33550 425 aa3.71□□□□□ -1.82
MCD1YDL003W DMA2P53924 522 aa3.71□□□□□ -1.82
MCD1YDL003W MEC3Q02574 474 aa3.71□□□□□ -1.82
MCD1YDL003W ALG6Q12001 544 aaKnown RBP3.71□□□□□ -1.82
MCD1YDL003W REI1P38344 393 aaPredicted RBP3.7□□□□□ -1.82
MCD1YDL003W MSH4P40965 878 aaPredicted RBP3.7□□□□□ -1.82
MCD1YDL003W HTS1P07263 546 aaKnown RBP3.7□□□□□ -1.82
MCD1YDL003W TSA1P34760 196 aaKnown RBP3.7□□□□□ -1.82
MCD1YDL003W YIG1Q08956 461 aa3.7□□□□□ -1.82
MCD1YDL003W NPR1P22211 790 aa3.69□□□□□ -1.82
MCD1YDL003W NFS1P25374 497 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms