RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C MNR2P35724 969 aa6.03□□□□□ -1.44
SHE3YBR130C RSC4Q02206 625 aa6.03□□□□□ -1.44
SHE3YBR130C RPP1AP05318 106 aaPredicted RBP6.02□□□□□ -1.45
SHE3YBR130C PET112P33893 541 aa6.02□□□□□ -1.45
SHE3YBR130C SKN7P38889 622 aa6.02□□□□□ -1.45
SHE3YBR130C RPS26AP39938 119 aaKnown RBP6.02□□□□□ -1.45
SHE3YBR130C RPS26BP39939 119 aaKnown RBP6.02□□□□□ -1.45
SHE3YBR130C SPR28Q04921 423 aa6.02□□□□□ -1.45
SHE3YBR130C MAG2Q06436 670 aaKnown RBP6.02□□□□□ -1.45
SHE3YBR130C PIN2Q12057 282 aa6.02□□□□□ -1.45
SHE3YBR130C WRS1Q12109 432 aaKnown RBP6.02□□□□□ -1.45
SHE3YBR130C YOL098CQ12496 1037 aa6.02□□□□□ -1.45
SHE3YBR130C RGP1P16664 663 aa6.01□□□□□ -1.45
SHE3YBR130C RPC31P17890 251 aa6.01□□□□□ -1.45
SHE3YBR130C BRN1P38170 754 aa6.01□□□□□ -1.45
SHE3YBR130C NTA1P40354 457 aa6.01□□□□□ -1.45
SHE3YBR130C SBE2P42223 864 aaKnown RBP6.01□□□□□ -1.45
SHE3YBR130C OSW7P43611 510 aa6.01□□□□□ -1.45
SHE3YBR130C YJL049WP47048 450 aa6.01□□□□□ -1.45
SHE3YBR130C KAR2P16474 682 aaKnown RBP6□□□□□ -1.45
SHE3YBR130C KTR2P33550 425 aa6□□□□□ -1.45
SHE3YBR130C IRS4P36115 615 aaKnown RBP6□□□□□ -1.45
SHE3YBR130C NMD2P38798 1089 aaKnown RBP6□□□□□ -1.45
SHE3YBR130C VAC8P39968 578 aa6□□□□□ -1.45
SHE3YBR130C SKP1P52286 194 aa6□□□□□ -1.45
SHE3YBR130C CWC24P53769 259 aa6□□□□□ -1.45
SHE3YBR130C ALD6P54115 500 aaKnown RBP6□□□□□ -1.45
SHE3YBR130C YMR187CQ03236 431 aa6□□□□□ -1.45
SHE3YBR130C VPS16Q03308 798 aa6□□□□□ -1.45
SHE3YBR130C TDA6Q06466 467 aa6□□□□□ -1.45
SHE3YBR130C YOR296WQ08748 1289 aa6□□□□□ -1.45
SHE3YBR130C MSN1P22148 382 aa5.99□□□□□ -1.45
SHE3YBR130C FPS1P23900 669 aa5.99□□□□□ -1.45
SHE3YBR130C MRPL16P38064 232 aa5.99□□□□□ -1.45
SHE3YBR130C ISW1P38144 1129 aa5.99□□□□□ -1.45
SHE3YBR130C GIP1P38229 639 aa5.99□□□□□ -1.45
SHE3YBR130C ECM2P38241 364 aaKnown RBP5.99□□□□□ -1.45
SHE3YBR130C MRPS18P42847 217 aa5.99□□□□□ -1.45
SHE3YBR130C NRD1P53617 575 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
SHE3YBR130C CUS1Q02554 436 aaPredicted RBP5.99□□□□□ -1.45
SHE3YBR130C MCD1Q12158 566 aa5.99□□□□□ -1.45
SHE3YBR130C RAD2P07276 1031 aa5.98□□□□□ -1.45
SHE3YBR130C CYC8P14922 966 aa5.98□□□□□ -1.45
SHE3YBR130C MCX1P38323 520 aaPredicted RBP5.98□□□□□ -1.45
SHE3YBR130C YHL008CP38750 627 aa5.98□□□□□ -1.45
SHE3YBR130C PSY2P40164 858 aa5.98□□□□□ -1.45
SHE3YBR130C GPM1P00950 247 aaKnown RBP5.97□□□□□ -1.45
SHE3YBR130C SRP40P32583 406 aaPredicted RBP5.97□□□□□ -1.45
SHE3YBR130C BSD2P38356 321 aa5.97□□□□□ -1.45
SHE3YBR130C YNR014WP53719 212 aa5.97□□□□□ -1.45
SHE3YBR130C DOS2P54858 310 aa5.97□□□□□ -1.45
SHE3YBR130C YCS4Q06156 1176 aa5.97□□□□□ -1.45
SHE3YBR130C INP54Q08227 384 aaKnown RBP5.97□□□□□ -1.45
SHE3YBR130C SBP1P10080 294 aaKnown RBP5.96□□□□□ -1.46
SHE3YBR130C PRE9P23638 258 aaKnown RBP5.96□□□□□ -1.46
SHE3YBR130C NCL1P38205 684 aaKnown RBP5.96□□□□□ -1.46
SHE3YBR130C YAF9P53930 226 aa5.96□□□□□ -1.46
SHE3YBR130C ALD3P54114 506 aa5.96□□□□□ -1.46
SHE3YBR130C DAL4Q04895 635 aa5.96□□□□□ -1.46
SHE3YBR130C APM2P38700 605 aa5.95□□□□□ -1.46
SHE3YBR130C RGD2P43556 714 aa5.95□□□□□ -1.46
SHE3YBR130C TIF6Q12522 245 aaKnown RBP5.95□□□□□ -1.46
SHE3YBR130C HXK1P04806 485 aaKnown RBP5.94□□□□□ -1.46
SHE3YBR130C AIM46P38885 310 aa5.94□□□□□ -1.46
SHE3YBR130C YOR131CQ12486 218 aa5.94□□□□□ -1.46
SHE3YBR130C FLP1P03870 423 aa5.93□□□□□ -1.46
SHE3YBR130C PPG1P32838 368 aa5.93□□□□□ -1.46
SHE3YBR130C PRP40P33203 583 aaKnown RBP5.93□□□□□ -1.46
SHE3YBR130C YKL091CP33324 310 aaKnown RBP5.93□□□□□ -1.46
SHE3YBR130C BOI2P39969 1040 aa5.93□□□□□ -1.46
SHE3YBR130C HEH2Q03281 663 aa5.93□□□□□ -1.46
SHE3YBR130C STI1P15705 589 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
SHE3YBR130C KNS1P32350 737 aaPredicted RBP5.92□□□□□ -1.46
SHE3YBR130C NAB2P32505 525 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46 RIP-Chip
SHE3YBR130C KRI1P42846 591 aaKnown RBP5.92□□□□□ -1.46
SHE3YBR130C ITC1P53125 1264 aa5.92□□□□□ -1.46
SHE3YBR130C SSF2Q12153 453 aaPredicted RBP5.92□□□□□ -1.46
SHE3YBR130C RRP14P36080 434 aaKnown RBP5.91□□□□□ -1.46
SHE3YBR130C FAA3P39002 694 aa5.91□□□□□ -1.46
SHE3YBR130C YIL165CP40446 119 aa5.91□□□□□ -1.46
SHE3YBR130C YNR040WP53736 256 aa5.91□□□□□ -1.46
SHE3YBR130C PDC5P16467 563 aaKnown RBP5.9□□□□□ -1.46
SHE3YBR130C SPC42P36094 363 aa5.9□□□□□ -1.46
SHE3YBR130C RVS167P39743 482 aaKnown RBP5.9□□□□□ -1.46
SHE3YBR130C YER156CP40093 338 aaKnown RBP5.9□□□□□ -1.46
SHE3YBR130C RNH70P53331 553 aa5.9□□□□□ -1.46
SHE3YBR130C YCK2P23292 546 aaKnown RBP5.89□□□□□ -1.47
SHE3YBR130C FPR3P38911 411 aaKnown RBP5.89□□□□□ -1.47
SHE3YBR130C GDE1Q02979 1223 aa5.89□□□□□ -1.47
SHE3YBR130C ADI1Q03677 179 aa5.89□□□□□ -1.47
SHE3YBR130C TY1A-DR2Q03964 440 aaKnown RBP5.89□□□□□ -1.47
SHE3YBR130C IOC4Q04213 475 aa5.89□□□□□ -1.47
SHE3YBR130C NSE3Q05541 303 aa5.89□□□□□ -1.47
SHE3YBR130C EMG1Q06287 252 aaKnown RBP5.89□□□□□ -1.47
SHE3YBR130C RSC2Q06488 889 aa5.89□□□□□ -1.47
SHE3YBR130C CDC53Q12018 815 aaKnown RBP5.89□□□□□ -1.47
SHE3YBR130C CDC34P14682 295 aa5.88□□□□□ -1.47
SHE3YBR130C SQT1P35184 431 aa5.88□□□□□ -1.47
SHE3YBR130C MSC7P38694 644 aa5.88□□□□□ -1.47
SHE3YBR130C YPL109CQ02981 657 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms