RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	NUP85	P46673	744 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	SKP1	P52286	194 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	RTT10	Q08924	1013 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	LEU1	P07264	779 aa	Known RBP	4.7	□□□□□ -1.66
PHO88	YBR106W	CDC34	P14682	295 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	PPG1	P32838	368 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	YKL091C	P33324	310 aa	Known RBP	4.7	□□□□□ -1.66
PHO88	YBR106W	APM2	P38700	605 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	YNL165W	P53891	406 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	MSH6	Q03834	1242 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	UTP14	Q04500	899 aa	Known RBP	4.7	□□□□□ -1.66
PHO88	YBR106W	MET32	Q12041	191 aa		4.7	□□□□□ -1.66
PHO88	YBR106W	RPS31	P05759	152 aa	Known RBP	4.69	□□□□□ -1.66
PHO88	YBR106W	SQT1	P35184	431 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	SPC42	P36094	363 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	NCL1	P38205	684 aa	Known RBP	4.69	□□□□□ -1.66
PHO88	YBR106W	ENT3	P47160	408 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	UBP15	P50101	1230 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	NUT1	P53114	1132 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	RNH70	P53331	553 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	UBP2	Q01476	1272 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	YPL109C	Q02981	657 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	RPN4	Q03465	531 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	NSE3	Q05541	303 aa		4.69	□□□□□ -1.66
PHO88	YBR106W	SSF2	Q12153	453 aa	Predicted RBP	4.69	□□□□□ -1.66
PHO88	YBR106W	RGP1	P16664	663 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
PHO88	YBR106W	YIL165C	P40446	119 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	PTK2	P47116	818 aa	Known RBP	4.68	□□□□□ -1.66
PHO88	YBR106W	YGR053C	P53234	283 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	ULP1	Q02724	621 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	GDE1	Q02979	1223 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	HEH2	Q03281	663 aa		4.68	□□□□□ -1.66
PHO88	YBR106W	PDC6	P26263	563 aa	Known RBP	4.67	□□□□□ -1.66
PHO88	YBR106W	SAP155	P43612	1002 aa		4.67	□□□□□ -1.66
PHO88	YBR106W	YGL081W	P53156	320 aa		4.67	□□□□□ -1.66
PHO88	YBR106W	NAN1	Q02931	896 aa	Known RBP	4.67	□□□□□ -1.66
PHO88	YBR106W	EMG1	Q06287	252 aa	Known RBP	4.67	□□□□□ -1.66
PHO88	YBR106W	SPO75	Q07798	868 aa		4.67	□□□□□ -1.66
PHO88	YBR106W	CDC53	Q12018	815 aa	Known RBP	4.67	□□□□□ -1.66
PHO88	YBR106W	GRX1	P25373	110 aa	Known RBP	4.66	□□□□□ -1.66
PHO88	YBR106W	SLA1	P32790	1244 aa		4.66	□□□□□ -1.66
PHO88	YBR106W	GGA2	P38817	585 aa	Known RBP	4.66	□□□□□ -1.66
PHO88	YBR106W	FAA3	P39002	694 aa		4.66	□□□□□ -1.66
PHO88	YBR106W	YJR115W	P47152	169 aa		4.66	□□□□□ -1.66
PHO88	YBR106W	CUS1	Q02554	436 aa	Predicted RBP	4.66	□□□□□ -1.66
PHO88	YBR106W	MCM5	P29496	775 aa	Known RBP	4.65	□□□□□ -1.67
PHO88	YBR106W	YKL077W	P36081	392 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	SHM1	P37292	490 aa	Predicted RBP	4.65	□□□□□ -1.67
PHO88	YBR106W	YJR098C	P47139	656 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	RSM26	P47141	266 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	GCR2	Q01722	534 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	NOG1	Q02892	647 aa	Known RBP	4.65	□□□□□ -1.67
PHO88	YBR106W	TDA5	Q06417	326 aa	Known RBP	4.65	□□□□□ -1.67
PHO88	YBR106W	OPI10	Q08202	246 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	PSH1	Q12161	406 aa		4.65	□□□□□ -1.67
PHO88	YBR106W	PRP5	P21372	849 aa	Predicted RBP	4.64	□□□□□ -1.67
PHO88	YBR106W	PYC2	P32327	1180 aa	Known RBP	4.64	□□□□□ -1.67
PHO88	YBR106W	BSD2	P38356	321 aa		4.64	□□□□□ -1.67
PHO88	YBR106W	YER156C	P40093	338 aa	Known RBP	4.64	□□□□□ -1.67
PHO88	YBR106W	LEM3	P42838	414 aa		4.64	□□□□□ -1.67
PHO88	YBR106W	SPO20	Q04359	397 aa		4.64	□□□□□ -1.67
PHO88	YBR106W	POB3	Q04636	552 aa	Known RBP	4.64	□□□□□ -1.67
PHO88	YBR106W	DLD1	P32891	587 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	IOC3	P43596	787 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	ITC1	P53125	1264 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	MON1	P53129	644 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	KRE33	P53914	1056 aa	Known RBP	4.63	□□□□□ -1.67
PHO88	YBR106W	FAR11	P53917	953 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	CTR9	P89105	1077 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
PHO88	YBR106W	IOC4	Q04213	475 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	BDF2	Q07442	638 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	OSH2	Q12451	1283 aa		4.63	□□□□□ -1.67
PHO88	YBR106W	GCR1	P07261	785 aa		4.62	□□□□□ -1.67
PHO88	YBR106W	VMA4	P22203	233 aa	Known RBP	4.62	□□□□□ -1.67
PHO88	YBR106W	ARL1	P38116	183 aa	Known RBP	4.62	□□□□□ -1.67
PHO88	YBR106W	ATG14	P38270	344 aa		4.62	□□□□□ -1.67
PHO88	YBR106W	PEX28	P38848	579 aa		4.62	□□□□□ -1.67
PHO88	YBR106W	SPF1	P39986	1215 aa	Known RBP	4.62	□□□□□ -1.67
PHO88	YBR106W	SHE9	Q04172	456 aa		4.62	□□□□□ -1.67
PHO88	YBR106W	FAL1	Q12099	399 aa	Known RBP	4.62	□□□□□ -1.67
PHO88	YBR106W	TCB1	Q12466	1186 aa		4.62	□□□□□ -1.67
PHO88	YBR106W	MET6	P05694	767 aa	Known RBP	4.61	□□□□□ -1.67
PHO88	YBR106W	CIT2	P08679	460 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	FUS1	P11710	512 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	SEC23	P15303	768 aa	Known RBP	4.61	□□□□□ -1.67
PHO88	YBR106W	NPR1	P22211	790 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	AGP1	P25376	633 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	GAR1	P28007	205 aa	Known RBP	4.61	□□□□□ -1.67
PHO88	YBR106W	MRP8	P35719	219 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	MRPL16	P38064	232 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	BUD6	P41697	788 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	FAA4	P47912	694 aa	Known RBP	4.61	□□□□□ -1.67
PHO88	YBR106W	GUP1	P53154	560 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	ALG12	P53730	551 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	MRL1	Q06815	381 aa		4.61	□□□□□ -1.67
PHO88	YBR106W	RAD4	P14736	754 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	SBA1	P28707	216 aa	Known RBP	4.6	□□□□□ -1.67
PHO88	YBR106W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms