RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 SOX12O15370 315 aa15.81■□□□□ 0.12
SPIN3-232ENST00000639956 PHACTR3Q96KR7 559 aa15.81■□□□□ 0.12
SPIN3-232ENST00000639956 TULP4Q9NRJ4 1543 aa15.81■□□□□ 0.12
SPIN3-232ENST00000639956 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
SPIN3-232ENST00000639956 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
SPIN3-232ENST00000639956 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
SPIN3-232ENST00000639956 EMILIN1Q9Y6C2 1016 aa15.8■□□□□ 0.12
SPIN3-232ENST00000639956 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
SPIN3-232ENST00000639956 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
SPIN3-232ENST00000639956 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
SPIN3-232ENST00000639956 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
SPIN3-232ENST00000639956 NINLQ9Y2I6 1382 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 YEATS2Q9ULM3 1422 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
SPIN3-232ENST00000639956 RRS1Q15050 365 aaKnown RBP15.77■□□□□ 0.12
SPIN3-232ENST00000639956 FAM83GA6ND36 823 aa15.77■□□□□ 0.11
SPIN3-232ENST00000639956 GLI2P10070 1586 aa15.76■□□□□ 0.11
SPIN3-232ENST00000639956 ANKRD45Q5TZF3 282 aa15.76■□□□□ 0.11
SPIN3-232ENST00000639956 ABCC3O15438 1527 aa15.76■□□□□ 0.11
SPIN3-232ENST00000639956 NME9Q86XW9 330 aa15.75■□□□□ 0.11
SPIN3-232ENST00000639956 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
SPIN3-232ENST00000639956 APBB1O00213 710 aa15.75■□□□□ 0.11
SPIN3-232ENST00000639956 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
SPIN3-232ENST00000639956 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
SPIN3-232ENST00000639956 ABCC11Q96J66 1382 aa15.74■□□□□ 0.11
SPIN3-232ENST00000639956 NLRP1Q9C000 1473 aa15.73■□□□□ 0.11
SPIN3-232ENST00000639956 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
SPIN3-232ENST00000639956 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
SPIN3-232ENST00000639956 PPLO60437 1756 aa15.73■□□□□ 0.11
SPIN3-232ENST00000639956 ATAD2Q6PL18 1390 aa15.73■□□□□ 0.11
SPIN3-232ENST00000639956 ZBTB40Q9NUA8 1239 aa15.72■□□□□ 0.11
SPIN3-232ENST00000639956 SLC52A1Q9NWF4 448 aa15.72■□□□□ 0.11
SPIN3-232ENST00000639956 SETBP1Q9Y6X0 1596 aa15.72■□□□□ 0.11
SPIN3-232ENST00000639956 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
SPIN3-232ENST00000639956 LMTK2Q8IWU2 1503 aa15.72■□□□□ 0.11
SPIN3-232ENST00000639956 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.11
SPIN3-232ENST00000639956 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
SPIN3-232ENST00000639956 MYO3AQ8NEV4 1616 aa15.71■□□□□ 0.11
SPIN3-232ENST00000639956 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
SPIN3-232ENST00000639956 MLH3Q9UHC1 1453 aa15.7■□□□□ 0.1
SPIN3-232ENST00000639956 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
SPIN3-232ENST00000639956 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
SPIN3-232ENST00000639956 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
SPIN3-232ENST00000639956 NSD2O96028 1365 aa15.69■□□□□ 0.1
SPIN3-232ENST00000639956 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
SPIN3-232ENST00000639956 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
SPIN3-232ENST00000639956 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 HECW2Q9P2P5 1572 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
SPIN3-232ENST00000639956 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 SMC5Q8IY18 1101 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
SPIN3-232ENST00000639956 FCHSD2O94868 740 aa15.67■□□□□ 0.1
SPIN3-232ENST00000639956 PANK2Q9BZ23 570 aa15.67■□□□□ 0.1
SPIN3-232ENST00000639956 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
SPIN3-232ENST00000639956 AAMPQ13685 434 aa15.67■□□□□ 0.1
SPIN3-232ENST00000639956 VAMP4O75379 141 aa15.66■□□□□ 0.1
SPIN3-232ENST00000639956 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
SPIN3-232ENST00000639956 MCM4P33991 863 aa15.66■□□□□ 0.1
SPIN3-232ENST00000639956 ARHGEF28Q8N1W1 1705 aaKnown RBP15.66■□□□□ 0.1
SPIN3-232ENST00000639956 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
SPIN3-232ENST00000639956 ZC3H13Q5T200 1668 aaKnown RBP15.65■□□□□ 0.1
SPIN3-232ENST00000639956 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
SPIN3-232ENST00000639956 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
SPIN3-232ENST00000639956 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
SPIN3-232ENST00000639956 NUCB1Q02818 461 aa15.65■□□□□ 0.1
SPIN3-232ENST00000639956 NFE2L2Q16236 605 aa15.65■□□□□ 0.1
SPIN3-232ENST00000639956 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
SPIN3-232ENST00000639956 CD163L1Q9NR16 1453 aa15.64■□□□□ 0.09
SPIN3-232ENST00000639956 CD2BP2O95400 341 aaKnown RBP15.64■□□□□ 0.09
SPIN3-232ENST00000639956 PUS7Q96PZ0 661 aaKnown RBP15.64■□□□□ 0.09
SPIN3-232ENST00000639956 ZBTB7BO15156 539 aaPredicted RBP15.64■□□□□ 0.09
SPIN3-232ENST00000639956 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
SPIN3-232ENST00000639956 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
SPIN3-232ENST00000639956 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
SPIN3-232ENST00000639956 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
SPIN3-232ENST00000639956 PTPRMP28827 1452 aa15.63■□□□□ 0.09
SPIN3-232ENST00000639956 MCM10Q7L590 875 aa15.63■□□□□ 0.09
SPIN3-232ENST00000639956 CHMP5Q9NZZ3 219 aa15.63■□□□□ 0.09
SPIN3-232ENST00000639956 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
SPIN3-232ENST00000639956 TRAK2O60296 914 aa15.62■□□□□ 0.09
SPIN3-232ENST00000639956 MYO5BQ9ULV0 1848 aa15.62■□□□□ 0.09
SPIN3-232ENST00000639956 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
SPIN3-232ENST00000639956 COG3Q96JB2 828 aa15.61■□□□□ 0.09
SPIN3-232ENST00000639956 SULT6B1Q6IMI4 303 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 NUDT16Q96DE0 195 aaKnown RBP15.6■□□□□ 0.09
SPIN3-232ENST00000639956 IL16Q14005 1332 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
SPIN3-232ENST00000639956 IL13P35225 146 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 GOLGA6L3A6NEY3 463 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 XRCC6P12956 609 aaKnown RBP eCLIP15.6■□□□□ 0.09
SPIN3-232ENST00000639956 ALDH1L2Q3SY69 923 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
SPIN3-232ENST00000639956 OTUD7AQ8TE49 926 aaPredicted RBP15.6■□□□□ 0.09
SPIN3-232ENST00000639956 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms