RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RHBDL3P58872 404 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 NFKBIBQ15653 356 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 JADE2Q9NQC1 790 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 NPHP1O15259 732 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 FMNL3Q8IVF7 1028 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 RAB11FIP3O75154 756 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 EEA1Q15075 1411 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 CHAF1AQ13111 956 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 MFSD4BQ5TF39 518 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CCAR1Q8IX12 1150 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 STK24Q9Y6E0 443 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 POU5F1Q01860 360 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 RETREG2Q8NC44 543 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ERBB3P21860 1342 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 SF3A1Q15459 793 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 TACO1Q9BSH4 297 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 RASSF4Q9H2L5 321 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CTDP1Q9Y5B0 961 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 KCNV2Q8TDN2 545 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ECM2O94769 699 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 CHGAP10645 457 aaKnown RBP5.19□□□□□ -1.58
SCN3A-209ENST00000639244 ATP6V1AP38606 617 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 AP1ARQ63HQ0 302 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL10Q6JEL2 608 aa5.19□□□□□ -1.58
SCN3A-209ENST00000639244 FAM200BP0CF97 657 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 BECN1Q14457 450 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 EVI5LQ96CN4 794 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 RSPH14Q9UHP6 348 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 PDCD2Q16342 344 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CWC25Q9NXE8 425 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 SYAP1Q96A49 352 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 NAP1L4Q99733 375 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CPSF2Q9P2I0 782 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 LCA5Q86VQ0 697 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 ANKRD20A12PQ8NF67 263 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 NOL10Q9BSC4 688 aaKnown RBP5.18□□□□□ -1.58
SCN3A-209ENST00000639244 CHMP4CQ96CF2 233 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 UQCRHLA0A096LP55 91 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 UQCRHP07919 91 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 PPP2R5AQ15172 486 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 JAKMIP3Q5VZ66 844 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 WWC2Q6AWC2 1192 aa5.18□□□□□ -1.58
SCN3A-209ENST00000639244 SHTN1A0MZ66 631 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 PSMD2Q13200 908 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL23Q8NBE8 558 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KIF2CQ99661 725 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CSB-PGBD3P0DP91 1061 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 EP400NLQ6ZTU2 488 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 IQCGQ9H095 443 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 DNAJC5Q9H3Z4 198 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SWAP70Q9UH65 585 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 KLHL33A6NCF5 533 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 IBSPP21815 317 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC73Q6ZRK6 1079 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SENP3-EIF4A1A0A087X0R7 540 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 BICDL2A1A5D9 508 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC92Q53HC0 331 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SF3B2Q13435 895 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 MEX3CQ5U5Q3 659 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 SLC24A3Q9HC58 644 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 FBXO9Q9UK97 447 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 COQ9O75208 318 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 DCAF11Q8TEB1 546 aa5.17□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC47Q96A33 483 aaKnown RBP5.17□□□□□ -1.58
SCN3A-209ENST00000639244 TSR1Q2NL82 804 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IRAK4Q9NWZ3 460 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 PABPN1LA6NDY0 278 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TTLL5Q6EMB2 1281 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 MRE11P49959 708 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SESN3P58005 492 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 CACTIN-AS1Q8N1I8 211 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 RGL2O15211 777 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 FILIP1LQ4L180 1135 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TRIM29Q14134 588 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 OFD1O75665 1012 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 HDLBPQ00341 1268 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 RBBP5Q15291 538 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 INF2Q27J81 1249 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 SUFUQ9UMX1 484 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 C1orf131Q8NDD1 294 aaKnown RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TBC1D22AQ8WUA7 517 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 MPP4Q96JB8 637 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 TEX13AQ9BXU3 409 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IL16Q14005 1332 aa5.16□□□□□ -1.58
SCN3A-209ENST00000639244 IRX1P78414 480 aaPredicted RBP5.15□□□□□ -1.58
SCN3A-209ENST00000639244 MAP2K2P36507 400 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ZC3H4Q9UPT8 1303 aaKnown RBP5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ATICP31939 592 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 USP8P40818 1118 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 ARHGEF10LQ9HCE6 1279 aa5.15□□□□□ -1.58
SCN3A-209ENST00000639244 CD151P48509 253 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 MCM6Q14566 821 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 VPS37AQ8NEZ2 397 aa5.15□□□□□ -1.59
SCN3A-209ENST00000639244 C17orf50Q8WW18 174 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms