RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 HSPA2P54652 639 aa17.74■□□□□ 0.43
KCNMA1-236ENST00000638506 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
KCNMA1-236ENST00000638506 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
KCNMA1-236ENST00000638506 RRP7AQ9Y3A4 280 aaKnown RBP17.74■□□□□ 0.43
KCNMA1-236ENST00000638506 KCNA6P17658 529 aa17.73■□□□□ 0.43
KCNMA1-236ENST00000638506 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
KCNMA1-236ENST00000638506 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
KCNMA1-236ENST00000638506 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
KCNMA1-236ENST00000638506 FYB1O15117 783 aa17.72■□□□□ 0.43
KCNMA1-236ENST00000638506 BCAR3O75815 825 aa17.72■□□□□ 0.43
KCNMA1-236ENST00000638506 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
KCNMA1-236ENST00000638506 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
KCNMA1-236ENST00000638506 CABP1Q9NZU7 370 aa17.71■□□□□ 0.43
KCNMA1-236ENST00000638506 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.42
KCNMA1-236ENST00000638506 MS4A1P11836 297 aa17.71■□□□□ 0.42
KCNMA1-236ENST00000638506 WDR63Q8IWG1 891 aa17.71■□□□□ 0.42
KCNMA1-236ENST00000638506 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
KCNMA1-236ENST00000638506 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
KCNMA1-236ENST00000638506 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
KCNMA1-236ENST00000638506 DIP2AQ14689 1571 aa17.69■□□□□ 0.42
KCNMA1-236ENST00000638506 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
KCNMA1-236ENST00000638506 ERICH6Q7L0X2 663 aa17.69■□□□□ 0.42
KCNMA1-236ENST00000638506 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
KCNMA1-236ENST00000638506 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
KCNMA1-236ENST00000638506 ANKRD26Q9UPS8 1709 aa17.68■□□□□ 0.42
KCNMA1-236ENST00000638506 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
KCNMA1-236ENST00000638506 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
KCNMA1-236ENST00000638506 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
KCNMA1-236ENST00000638506 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
KCNMA1-236ENST00000638506 PDE4AP27815 886 aa17.66■□□□□ 0.42
KCNMA1-236ENST00000638506 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-236ENST00000638506 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-236ENST00000638506 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
KCNMA1-236ENST00000638506 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
KCNMA1-236ENST00000638506 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
KCNMA1-236ENST00000638506 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
KCNMA1-236ENST00000638506 ADGRB2O60241 1585 aa17.64■□□□□ 0.41
KCNMA1-236ENST00000638506 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.41
KCNMA1-236ENST00000638506 BACH2Q9BYV9 841 aa17.63■□□□□ 0.41
KCNMA1-236ENST00000638506 ATP7BP35670 1465 aa17.63■□□□□ 0.41
KCNMA1-236ENST00000638506 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 KIF20BQ96Q89 1820 aa17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
KCNMA1-236ENST00000638506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
KCNMA1-236ENST00000638506 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
KCNMA1-236ENST00000638506 DIAPH1O60610 1272 aaKnown RBP17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 PRKCSHP14314 528 aaPredicted RBP17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
KCNMA1-236ENST00000638506 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
KCNMA1-236ENST00000638506 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
KCNMA1-236ENST00000638506 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
KCNMA1-236ENST00000638506 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
KCNMA1-236ENST00000638506 PANK1Q8TE04 598 aa17.58■□□□□ 0.4
KCNMA1-236ENST00000638506 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.4
KCNMA1-236ENST00000638506 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
KCNMA1-236ENST00000638506 FBLN1P23142 703 aa17.57■□□□□ 0.4
KCNMA1-236ENST00000638506 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
KCNMA1-236ENST00000638506 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
KCNMA1-236ENST00000638506 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
KCNMA1-236ENST00000638506 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 CDC42BPGQ6DT37 1551 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
KCNMA1-236ENST00000638506 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-236ENST00000638506 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 NME9Q86XW9 330 aa17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
KCNMA1-236ENST00000638506 ACEP12821 1306 aa17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 CT47B1P0C2W7 299 aaPredicted RBP17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 MON2Q7Z3U7 1717 aa17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 FCHSD2O94868 740 aa17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 RIPK4P57078 832 aa17.53■□□□□ 0.4
KCNMA1-236ENST00000638506 IL16Q14005 1332 aa17.52■□□□□ 0.4
KCNMA1-236ENST00000638506 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.4
KCNMA1-236ENST00000638506 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
KCNMA1-236ENST00000638506 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.39
KCNMA1-236ENST00000638506 IGHDP01880 384 aa17.51■□□□□ 0.39
KCNMA1-236ENST00000638506 AAMPQ13685 434 aa17.51■□□□□ 0.39
KCNMA1-236ENST00000638506 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
KCNMA1-236ENST00000638506 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
KCNMA1-236ENST00000638506 RLBP1P12271 317 aa17.5■□□□□ 0.39
KCNMA1-236ENST00000638506 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
KCNMA1-236ENST00000638506 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
KCNMA1-236ENST00000638506 PROSER2Q86WR7 435 aaPredicted RBP17.49■□□□□ 0.39
KCNMA1-236ENST00000638506 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
KCNMA1-236ENST00000638506 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms