RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 TATP17735 454 aaPredicted RBP7.87□□□□□ -1.15
PDE4D-228ENST00000636120 NECTIN2Q92692 538 aa7.87□□□□□ -1.15
PDE4D-228ENST00000636120 MEX3CQ5U5Q3 659 aaKnown RBP7.87□□□□□ -1.15
PDE4D-228ENST00000636120 C22orf23Q9BZE7 217 aa7.87□□□□□ -1.15
PDE4D-228ENST00000636120 SPG7Q9UQ90 795 aa7.87□□□□□ -1.15
PDE4D-228ENST00000636120 MAPKBP1O60336 1514 aa7.87□□□□□ -1.15
PDE4D-228ENST00000636120 ADGBQ8N7X0 1667 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 TRIM29Q14134 588 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 RASSF8Q8NHQ8 419 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 GNAI2P04899 355 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 TRDNQ13061 729 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
PDE4D-228ENST00000636120 SAMD9Q5K651 1589 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 PSMA5P28066 241 aa7.86□□□□□ -1.15
PDE4D-228ENST00000636120 DDX49Q9Y6V7 483 aaKnown RBP7.86□□□□□ -1.15
PDE4D-228ENST00000636120 KIF6Q6ZMV9 814 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
PDE4D-228ENST00000636120 KCNH5Q8NCM2 988 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 LNPKQ9C0E8 428 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 GSE1Q14687 1217 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 NUTM2GQ5VZR2 741 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 NUDT16Q96DE0 195 aaKnown RBP7.85□□□□□ -1.15
PDE4D-228ENST00000636120 NOS1P29475 1434 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 ARHGEF12Q9NZN5 1544 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 MCM2P49736 904 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 ASXL2Q76L83 1435 aa7.85□□□□□ -1.15
PDE4D-228ENST00000636120 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 SULT6B1Q6IMI4 303 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 VPS37DQ86XT2 251 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 CCDC61Q9Y6R9 512 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 ABCC2Q92887 1545 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 A2MP01023 1474 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 NKTRP30414 1462 aaKnown RBP7.84□□□□□ -1.15
PDE4D-228ENST00000636120 ERICH2A1L162 156 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 CLSTN1O94985 981 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 MVPQ14764 893 aaKnown RBP7.84□□□□□ -1.15
PDE4D-228ENST00000636120 HOOK1Q9UJC3 728 aaKnown RBP7.84□□□□□ -1.15
PDE4D-228ENST00000636120 SLFN5Q08AF3 891 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.15
PDE4D-228ENST00000636120 ATF7IPQ6VMQ6 1270 aa7.84□□□□□ -1.16
PDE4D-228ENST00000636120 CLASRPQ8N2M8 674 aaKnown RBP7.84□□□□□ -1.16
PDE4D-228ENST00000636120 SYTL4Q96C24 671 aaPredicted RBP7.84□□□□□ -1.16
PDE4D-228ENST00000636120 TPM2P07951 284 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.83□□□□□ -1.16
PDE4D-228ENST00000636120 SMC3Q9UQE7 1217 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 CFAP74Q9C0B2 1584 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 ABCC10Q5T3U5 1492 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 GOLGA6L19H0YKK7 550 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 SRCIN1Q9C0H9 1055 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 C14orf93Q9H972 538 aaKnown RBP7.83□□□□□ -1.16
PDE4D-228ENST00000636120 PDZRN3Q9UPQ7 1066 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 MARCH6O60337 910 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 TRIM34Q9BYJ4 488 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 CPLX1O14810 134 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 IFT57Q9NWB7 429 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 ANKRD36BQ8N2N9 1353 aa7.83□□□□□ -1.16
PDE4D-228ENST00000636120 MAST1Q9Y2H9 1570 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
PDE4D-228ENST00000636120 ASXL1Q8IXJ9 1541 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 GCC2Q8IWJ2 1684 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 APPP05067 770 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 HMGB2P26583 209 aaKnown RBP7.82□□□□□ -1.16
PDE4D-228ENST00000636120 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
PDE4D-228ENST00000636120 RABEP1Q15276 862 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
PDE4D-228ENST00000636120 CABP4P57796 275 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 FOXD4L4Q8WXT5 416 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 CCDC47Q96A33 483 aaKnown RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 ADGRL2O95490 1459 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 GNAT3A8MTJ3 354 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 TPD52L1Q16890 204 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 ADGRF5Q8IZF2 1346 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 PRAG1Q86YV5 1406 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 MCTP1Q6DN14 999 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 BCAR3O75815 825 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 LETM1O95202 739 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 TPM1P09493 284 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 RBM33Q96EV2 1170 aaKnown RBP7.81□□□□□ -1.16
PDE4D-228ENST00000636120 LRRCC1Q9C099 1032 aa7.81□□□□□ -1.16
PDE4D-228ENST00000636120 WASLO00401 505 aaPredicted RBP7.8□□□□□ -1.16
PDE4D-228ENST00000636120 SURF6O75683 361 aaKnown RBP7.8□□□□□ -1.16
PDE4D-228ENST00000636120 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 NFXL1Q6ZNB6 911 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 TTC21BQ7Z4L5 1316 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 RALYLQ86SE5 291 aaKnown RBP7.8□□□□□ -1.16
PDE4D-228ENST00000636120 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 LRPPRCP42704 1394 aaKnown RBP7.8□□□□□ -1.16
PDE4D-228ENST00000636120 BECN2A8MW95 431 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 NEUROD6Q96NK8 337 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 FSD1Q9BTV5 496 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 TPM3P06753 285 aa7.8□□□□□ -1.16
PDE4D-228ENST00000636120 SAFBQ15424 915 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDE4D-228ENST00000636120 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms