RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 IQGAP1P46940 1657 aa16.48■□□□□ 0.23
PSME3-217ENST00000622892 TMEM131LA2VDJ0 1609 aa16.48■□□□□ 0.23
PSME3-217ENST00000622892 NGEFQ8N5V2 710 aa16.48■□□□□ 0.23
PSME3-217ENST00000622892 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
PSME3-217ENST00000622892 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
PSME3-217ENST00000622892 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
PSME3-217ENST00000622892 LTKP29376 864 aa16.47■□□□□ 0.23
PSME3-217ENST00000622892 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
PSME3-217ENST00000622892 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
PSME3-217ENST00000622892 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
PSME3-217ENST00000622892 MYOM1P52179 1685 aa16.46■□□□□ 0.23
PSME3-217ENST00000622892 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.22
PSME3-217ENST00000622892 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
PSME3-217ENST00000622892 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
PSME3-217ENST00000622892 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
PSME3-217ENST00000622892 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
PSME3-217ENST00000622892 TRAK2O60296 914 aa16.44■□□□□ 0.22
PSME3-217ENST00000622892 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
PSME3-217ENST00000622892 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
PSME3-217ENST00000622892 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
PSME3-217ENST00000622892 NAP1L5Q96NT1 182 aaPredicted RBP16.44■□□□□ 0.22
PSME3-217ENST00000622892 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
PSME3-217ENST00000622892 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
PSME3-217ENST00000622892 DZIP1LQ8IYY4 767 aaKnown RBP16.43■□□□□ 0.22
PSME3-217ENST00000622892 METP08581 1390 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
PSME3-217ENST00000622892 VIRMAQ69YN4 1812 aaKnown RBP16.41■□□□□ 0.22
PSME3-217ENST00000622892 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
PSME3-217ENST00000622892 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
PSME3-217ENST00000622892 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
PSME3-217ENST00000622892 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
PSME3-217ENST00000622892 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
PSME3-217ENST00000622892 EVC2Q86UK5 1308 aa16.4■□□□□ 0.22
PSME3-217ENST00000622892 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
PSME3-217ENST00000622892 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
PSME3-217ENST00000622892 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
PSME3-217ENST00000622892 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
PSME3-217ENST00000622892 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
PSME3-217ENST00000622892 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
PSME3-217ENST00000622892 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 TRIM27P14373 513 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.38■□□□□ 0.21
PSME3-217ENST00000622892 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 AAMPQ13685 434 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 QRICH2Q9H0J4 1663 aa16.38■□□□□ 0.21
PSME3-217ENST00000622892 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
PSME3-217ENST00000622892 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
PSME3-217ENST00000622892 FER1L4A9Z1Z3 1794 aa16.37■□□□□ 0.21
PSME3-217ENST00000622892 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
PSME3-217ENST00000622892 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
PSME3-217ENST00000622892 FBLN1P23142 703 aa16.36■□□□□ 0.21
PSME3-217ENST00000622892 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
PSME3-217ENST00000622892 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
PSME3-217ENST00000622892 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
PSME3-217ENST00000622892 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
PSME3-217ENST00000622892 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
PSME3-217ENST00000622892 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
PSME3-217ENST00000622892 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
PSME3-217ENST00000622892 PTPRMP28827 1452 aa16.35■□□□□ 0.21
PSME3-217ENST00000622892 C3P01024 1663 aa16.34■□□□□ 0.21
PSME3-217ENST00000622892 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
PSME3-217ENST00000622892 RIMS1Q86UR5 1692 aaKnown RBP16.33■□□□□ 0.21
PSME3-217ENST00000622892 SOX12O15370 315 aa16.33■□□□□ 0.21
PSME3-217ENST00000622892 GRPEL1Q9HAV7 217 aa16.33■□□□□ 0.21
PSME3-217ENST00000622892 MRE11P49959 708 aa16.33■□□□□ 0.2
PSME3-217ENST00000622892 CCDC27Q2M243 656 aa16.33■□□□□ 0.2
PSME3-217ENST00000622892 CLCN1P35523 988 aa16.32■□□□□ 0.2
PSME3-217ENST00000622892 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
PSME3-217ENST00000622892 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
PSME3-217ENST00000622892 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
PSME3-217ENST00000622892 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
PSME3-217ENST00000622892 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
PSME3-217ENST00000622892 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
PSME3-217ENST00000622892 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
PSME3-217ENST00000622892 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
PSME3-217ENST00000622892 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
PSME3-217ENST00000622892 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
PSME3-217ENST00000622892 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
PSME3-217ENST00000622892 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
PSME3-217ENST00000622892 GAS2L3Q86XJ1 694 aa16.3■□□□□ 0.2
PSME3-217ENST00000622892 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
PSME3-217ENST00000622892 HSP90AA1P07900 732 aaKnown RBP16.3■□□□□ 0.2
PSME3-217ENST00000622892 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
PSME3-217ENST00000622892 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
PSME3-217ENST00000622892 SHPRHQ149N8 1683 aa16.29■□□□□ 0.2
PSME3-217ENST00000622892 SMC5Q8IY18 1101 aa16.29■□□□□ 0.2
PSME3-217ENST00000622892 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
PSME3-217ENST00000622892 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
PSME3-217ENST00000622892 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
PSME3-217ENST00000622892 CD2BP2O95400 341 aaKnown RBP16.28■□□□□ 0.2
PSME3-217ENST00000622892 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
PSME3-217ENST00000622892 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.2
PSME3-217ENST00000622892 ROBO2Q9HCK4 1378 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms