RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 AMPHP49418 695 aa12.25□□□□□ -0.45
CUL4A-212ENST00000617546 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
CUL4A-212ENST00000617546 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
CUL4A-212ENST00000617546 TNMDQ9H2S6 317 aa12.25□□□□□ -0.45
CUL4A-212ENST00000617546 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 SDF4Q9BRK5 362 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 G3BP1Q13283 466 aaKnown RBP eCLIP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 NEXNQ0ZGT2 675 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 RPAP2Q8IXW5 612 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 H0YHG0 523 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 ERC1Q8IUD2 1116 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 GBP3Q9H0R5 595 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
CUL4A-212ENST00000617546 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
CUL4A-212ENST00000617546 DEF6Q9H4E7 631 aa12.23□□□□□ -0.45
CUL4A-212ENST00000617546 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
CUL4A-212ENST00000617546 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
CUL4A-212ENST00000617546 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
CUL4A-212ENST00000617546 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
CUL4A-212ENST00000617546 MTHFSP49914 203 aa12.23□□□□□ -0.45
CUL4A-212ENST00000617546 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
CUL4A-212ENST00000617546 CAVIN2O95810 425 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 FILIP1LQ4L180 1135 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
CUL4A-212ENST00000617546 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 TRDNQ13061 729 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 CCDC191Q8NCU4 936 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
CUL4A-212ENST00000617546 MYO6Q9UM54 1294 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 PPP6R1Q9UPN7 881 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 DHX16O60231 1041 aaKnown RBP12.22□□□□□ -0.45
CUL4A-212ENST00000617546 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 SNX21Q969T3 373 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 CYP46A1Q9Y6A2 500 aa12.22□□□□□ -0.45
CUL4A-212ENST00000617546 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
CUL4A-212ENST00000617546 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.45
CUL4A-212ENST00000617546 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
CUL4A-212ENST00000617546 SMAP1Q8IYB5 467 aaPredicted RBP12.21□□□□□ -0.45
CUL4A-212ENST00000617546 PAXBP1Q9Y5B6 917 aa12.21□□□□□ -0.45
CUL4A-212ENST00000617546 PTPRGP23470 1445 aa12.21□□□□□ -0.45
CUL4A-212ENST00000617546 SMTNL1A8MU46 457 aa12.21□□□□□ -0.46
CUL4A-212ENST00000617546 SMC2O95347 1197 aa12.21□□□□□ -0.46
CUL4A-212ENST00000617546 GNAI2P04899 355 aa12.21□□□□□ -0.46
CUL4A-212ENST00000617546 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.46
CUL4A-212ENST00000617546 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.46
CUL4A-212ENST00000617546 PES1O00541 588 aaKnown RBP12.21□□□□□ -0.46
CUL4A-212ENST00000617546 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.46
CUL4A-212ENST00000617546 SOX12O15370 315 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 FIBPO43427 364 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 CEP57L1Q8IYX8 460 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 OFD1O75665 1012 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 TUBB4AP04350 444 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
CUL4A-212ENST00000617546 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
CUL4A-212ENST00000617546 INSRP06213 1382 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 KIAA0754O94854 1291 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 SPC24Q8NBT2 197 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 SYCE3A1L190 88 aa12.2□□□□□ -0.46
CUL4A-212ENST00000617546 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
CUL4A-212ENST00000617546 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
CUL4A-212ENST00000617546 KIF18AQ8NI77 898 aa12.19□□□□□ -0.46
CUL4A-212ENST00000617546 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
CUL4A-212ENST00000617546 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
CUL4A-212ENST00000617546 CCDC30Q5VVM6 783 aa12.19□□□□□ -0.46
CUL4A-212ENST00000617546 MCM3P25205 808 aa12.19□□□□□ -0.46
CUL4A-212ENST00000617546 UBXN4Q92575 508 aa12.19□□□□□ -0.46
CUL4A-212ENST00000617546 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 LRRCC1Q9C099 1032 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 CTAGE5O15320 804 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 RARSP54136 660 aaKnown RBP12.18□□□□□ -0.46
CUL4A-212ENST00000617546 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
CUL4A-212ENST00000617546 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
CUL4A-212ENST00000617546 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-212ENST00000617546 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 ZSCAN12O43309 604 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 XPCQ01831 940 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-212ENST00000617546 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 CAGE1Q8TC20 777 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 CCDC94Q9BW85 323 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-212ENST00000617546 GSDMDP57764 484 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 CBX1P83916 185 aa12.17□□□□□ -0.46
CUL4A-212ENST00000617546 TEFQ10587 303 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms