RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 EVI5O60447 810 aa10.39□□□□□ -0.75
SMAD4-210ENST00000590061 PPP1R15AO75807 674 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-210ENST00000590061 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
SMAD4-210ENST00000590061 FOSBP53539 338 aa10.38□□□□□ -0.75
SMAD4-210ENST00000590061 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
SMAD4-210ENST00000590061 PLA2R1Q13018 1463 aa10.37□□□□□ -0.75
SMAD4-210ENST00000590061 NLRP1Q9C000 1473 aa10.37□□□□□ -0.75
SMAD4-210ENST00000590061 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMAD4-210ENST00000590061 KIF1BO60333 1816 aa10.37□□□□□ -0.75
SMAD4-210ENST00000590061 CLTCQ00610 1675 aaKnown RBP10.37□□□□□ -0.75
SMAD4-210ENST00000590061 TNRQ92752 1358 aa10.37□□□□□ -0.75
SMAD4-210ENST00000590061 ERVK-7P63135 1459 aa10.36□□□□□ -0.75
SMAD4-210ENST00000590061 ARHGAP33O14559 1287 aa10.36□□□□□ -0.75
SMAD4-210ENST00000590061 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
SMAD4-210ENST00000590061 FER1L4A9Z1Z3 1794 aa10.36□□□□□ -0.75
SMAD4-210ENST00000590061 SPATA31D1Q6ZQQ2 1576 aa10.35□□□□□ -0.75
SMAD4-210ENST00000590061 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
SMAD4-210ENST00000590061 FBXO41Q8TF61 875 aa10.35□□□□□ -0.75
SMAD4-210ENST00000590061 PREX1Q8TCU6 1659 aa10.34□□□□□ -0.75
SMAD4-210ENST00000590061 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
SMAD4-210ENST00000590061 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
SMAD4-210ENST00000590061 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-210ENST00000590061 ZNF454Q8N9F8 522 aa10.34□□□□□ -0.75
SMAD4-210ENST00000590061 DCAF11Q8TEB1 546 aa10.34□□□□□ -0.75
SMAD4-210ENST00000590061 CFAP65Q6ZU64 1925 aaKnown RBP10.34□□□□□ -0.75
SMAD4-210ENST00000590061 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
SMAD4-210ENST00000590061 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 PTGER2P43116 358 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 PSEN2P49810 448 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 IDI1Q13907 227 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 ANKRD13DQ6ZTN6 518 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 UHRF1BP1Q6BDS2 1440 aa10.33□□□□□ -0.76
SMAD4-210ENST00000590061 ADAMTSL3P82987 1691 aa10.32□□□□□ -0.76
SMAD4-210ENST00000590061 DPYSL4O14531 572 aa10.32□□□□□ -0.76
SMAD4-210ENST00000590061 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
SMAD4-210ENST00000590061 EID1Q9Y6B2 187 aa10.32□□□□□ -0.76
SMAD4-210ENST00000590061 PIK3C2BO00750 1634 aa10.32□□□□□ -0.76
SMAD4-210ENST00000590061 CLTCL1P53675 1640 aa10.3□□□□□ -0.76
SMAD4-210ENST00000590061 MYT1Q01538 1121 aa10.3□□□□□ -0.76
SMAD4-210ENST00000590061 FBXO31Q5XUX0 539 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-210ENST00000590061 SIGLEC1Q9BZZ2 1709 aa10.3□□□□□ -0.76
SMAD4-210ENST00000590061 MYOM2P54296 1465 aa10.3□□□□□ -0.76
SMAD4-210ENST00000590061 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
SMAD4-210ENST00000590061 TK2O00142 265 aa10.29□□□□□ -0.76
SMAD4-210ENST00000590061 ADGRD1Q6QNK2 874 aa10.29□□□□□ -0.76
SMAD4-210ENST00000590061 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-210ENST00000590061 PTPRMP28827 1452 aa10.29□□□□□ -0.76
SMAD4-210ENST00000590061 SYNMO15061 1565 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 HRO43593 1189 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
SMAD4-210ENST00000590061 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 C3P01024 1663 aa10.28□□□□□ -0.76
SMAD4-210ENST00000590061 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
SMAD4-210ENST00000590061 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMAD4-210ENST00000590061 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
SMAD4-210ENST00000590061 A2ML1A8K2U0 1454 aa10.27□□□□□ -0.77
SMAD4-210ENST00000590061 PRAG1Q86YV5 1406 aa10.26□□□□□ -0.77
SMAD4-210ENST00000590061 RIMS1Q86UR5 1692 aaKnown RBP10.26□□□□□ -0.77
SMAD4-210ENST00000590061 PDIA6Q15084 440 aa10.26□□□□□ -0.77
SMAD4-210ENST00000590061 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
SMAD4-210ENST00000590061 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
SMAD4-210ENST00000590061 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
SMAD4-210ENST00000590061 KIAA1210Q9ULL0 1709 aa10.25□□□□□ -0.77
SMAD4-210ENST00000590061 E2F4Q16254 413 aa10.25□□□□□ -0.77
SMAD4-210ENST00000590061 ROCK2O75116 1388 aaKnown RBP10.25□□□□□ -0.77
SMAD4-210ENST00000590061 TMEM2Q9UHN6 1383 aa10.25□□□□□ -0.77
SMAD4-210ENST00000590061 RALGAPBQ86X10 1494 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 UGGT1Q9NYU2 1555 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 PHF14O94880 888 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-210ENST00000590061 ANKLE2Q86XL3 938 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 CARD11Q9BXL7 1154 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
SMAD4-210ENST00000590061 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
SMAD4-210ENST00000590061 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
SMAD4-210ENST00000590061 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
SMAD4-210ENST00000590061 GPRASP1Q5JY77 1395 aa10.23□□□□□ -0.77
SMAD4-210ENST00000590061 RIMS2Q9UQ26 1411 aa10.23□□□□□ -0.77
SMAD4-210ENST00000590061 LAMC1P11047 1609 aa10.22□□□□□ -0.77
SMAD4-210ENST00000590061 PTPREP23469 700 aa10.22□□□□□ -0.77
SMAD4-210ENST00000590061 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
SMAD4-210ENST00000590061 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
SMAD4-210ENST00000590061 PPLO60437 1756 aa10.21□□□□□ -0.77
SMAD4-210ENST00000590061 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.77
SMAD4-210ENST00000590061 TXNDC2Q86VQ3 553 aa10.21□□□□□ -0.77
SMAD4-210ENST00000590061 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
SMAD4-210ENST00000590061 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
SMAD4-210ENST00000590061 SLIT1O75093 1534 aa10.21□□□□□ -0.78
SMAD4-210ENST00000590061 NBPF8Q3BBV2 869 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 UBR1Q8IWV7 1749 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 BCANQ96GW7 911 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 IFT172Q9UG01 1749 aa10.2□□□□□ -0.78
SMAD4-210ENST00000590061 PLEKHG1Q9ULL1 1385 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms