RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 RAPGEF6Q8TEU7 1601 aa9.23□□□□□ -0.93
DNMT1-220ENST00000589351 PTPRMP28827 1452 aa9.22□□□□□ -0.93
DNMT1-220ENST00000589351 WFS1O76024 890 aa9.22□□□□□ -0.93
DNMT1-220ENST00000589351 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
DNMT1-220ENST00000589351 GMPR2Q9P2T1 348 aaKnown RBP9.22□□□□□ -0.93
DNMT1-220ENST00000589351 EEA1Q15075 1411 aa9.22□□□□□ -0.93
DNMT1-220ENST00000589351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
DNMT1-220ENST00000589351 AVPP01185 164 aa9.21□□□□□ -0.94
DNMT1-220ENST00000589351 POGZQ7Z3K3 1410 aa9.21□□□□□ -0.94
DNMT1-220ENST00000589351 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-220ENST00000589351 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
DNMT1-220ENST00000589351 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
DNMT1-220ENST00000589351 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
DNMT1-220ENST00000589351 C11orf95C9JLR9 678 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-220ENST00000589351 AXIN1O15169 862 aa9.19□□□□□ -0.94
DNMT1-220ENST00000589351 RPIAP49247 311 aa9.19□□□□□ -0.94
DNMT1-220ENST00000589351 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
DNMT1-220ENST00000589351 AKNAQ7Z591 1439 aa9.19□□□□□ -0.94
DNMT1-220ENST00000589351 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-220ENST00000589351 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-220ENST00000589351 BCORL1Q5H9F3 1711 aa9.17□□□□□ -0.94
DNMT1-220ENST00000589351 CFAP74Q9C0B2 1584 aa9.17□□□□□ -0.94
DNMT1-220ENST00000589351 NUP153P49790 1475 aaKnown RBP9.17□□□□□ -0.94
DNMT1-220ENST00000589351 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
DNMT1-220ENST00000589351 CYP4X1Q8N118 509 aa9.17□□□□□ -0.94
DNMT1-220ENST00000589351 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
DNMT1-220ENST00000589351 ATP1B4Q9UN42 357 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-220ENST00000589351 FCF1Q9Y324 198 aaKnown RBP9.17□□□□□ -0.94
DNMT1-220ENST00000589351 FANCAO15360 1455 aa9.16□□□□□ -0.94
DNMT1-220ENST00000589351 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
DNMT1-220ENST00000589351 CTC1Q2NKJ3 1217 aa9.16□□□□□ -0.94
DNMT1-220ENST00000589351 FHOD3Q2V2M9 1422 aa9.15□□□□□ -0.94
DNMT1-220ENST00000589351 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-220ENST00000589351 MADDQ8WXG6 1647 aa9.15□□□□□ -0.94
DNMT1-220ENST00000589351 PCF11O94913 1555 aaKnown RBP9.15□□□□□ -0.95
DNMT1-220ENST00000589351 MAGI2Q86UL8 1455 aa9.15□□□□□ -0.95
DNMT1-220ENST00000589351 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
DNMT1-220ENST00000589351 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-220ENST00000589351 MLECQ14165 292 aa9.14□□□□□ -0.95
DNMT1-220ENST00000589351 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
DNMT1-220ENST00000589351 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
DNMT1-220ENST00000589351 THAP11Q96EK4 314 aa9.14□□□□□ -0.95
DNMT1-220ENST00000589351 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
DNMT1-220ENST00000589351 WIPF1O43516 503 aa9.13□□□□□ -0.95
DNMT1-220ENST00000589351 FCHSD2O94868 740 aa9.13□□□□□ -0.95
DNMT1-220ENST00000589351 OATP04181 439 aa9.13□□□□□ -0.95
DNMT1-220ENST00000589351 MORN1Q5T089 497 aa9.13□□□□□ -0.95
DNMT1-220ENST00000589351 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-220ENST00000589351 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
DNMT1-220ENST00000589351 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
DNMT1-220ENST00000589351 ARHGEF40Q8TER5 1519 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 RICTORQ6R327 1708 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 HSPA2P54652 639 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 RSPH4AQ5TD94 716 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 LMTK3Q96Q04 1460 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 RIMS1Q86UR5 1692 aaKnown RBP9.12□□□□□ -0.95
DNMT1-220ENST00000589351 PLCH2O75038 1416 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 SCAPERQ9BY12 1400 aa9.12□□□□□ -0.95
DNMT1-220ENST00000589351 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
DNMT1-220ENST00000589351 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-220ENST00000589351 FUT2Q10981 343 aa9.1□□□□□ -0.95
DNMT1-220ENST00000589351 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
DNMT1-220ENST00000589351 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
DNMT1-220ENST00000589351 FMN1Q68DA7 1419 aa9.1□□□□□ -0.95
DNMT1-220ENST00000589351 ZMYM4Q5VZL5 1548 aa9.1□□□□□ -0.95
DNMT1-220ENST00000589351 ATP10AO60312 1499 aa9.09□□□□□ -0.95
DNMT1-220ENST00000589351 INSM1Q01101 510 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-220ENST00000589351 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
DNMT1-220ENST00000589351 YEATS2Q9ULM3 1422 aa9.08□□□□□ -0.96
DNMT1-220ENST00000589351 FMNL1O95466 1100 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-220ENST00000589351 SNRPBP14678 240 aaKnown RBP9.08□□□□□ -0.96
DNMT1-220ENST00000589351 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
DNMT1-220ENST00000589351 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
DNMT1-220ENST00000589351 HECW1Q76N89 1606 aa9.08□□□□□ -0.96
DNMT1-220ENST00000589351 TTC37Q6PGP7 1564 aa9.07□□□□□ -0.96
DNMT1-220ENST00000589351 CLIP1P30622 1438 aa9.07□□□□□ -0.96
DNMT1-220ENST00000589351 SMPD1P17405 629 aa9.07□□□□□ -0.96
DNMT1-220ENST00000589351 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
DNMT1-220ENST00000589351 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
DNMT1-220ENST00000589351 C9orf84Q5VXU9 1444 aa9.06□□□□□ -0.96
DNMT1-220ENST00000589351 CDK13Q14004 1512 aaKnown RBP9.06□□□□□ -0.96
DNMT1-220ENST00000589351 FER1L4A9Z1Z3 1794 aa9.06□□□□□ -0.96
DNMT1-220ENST00000589351 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
DNMT1-220ENST00000589351 TERTO14746 1132 aaKnown RBP9.05□□□□□ -0.96
DNMT1-220ENST00000589351 ZBTB24O43167 697 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-220ENST00000589351 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
DNMT1-220ENST00000589351 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
DNMT1-220ENST00000589351 WNT7AO00755 349 aa9.04□□□□□ -0.96
DNMT1-220ENST00000589351 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-220ENST00000589351 BRICD5Q6PL45 260 aa9.04□□□□□ -0.96
DNMT1-220ENST00000589351 AFAP1Q8N556 730 aa9.04□□□□□ -0.96
DNMT1-220ENST00000589351 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
DNMT1-220ENST00000589351 NLRP7Q8WX94 980 aa9.04□□□□□ -0.96
DNMT1-220ENST00000589351 SETD1BQ9UPS6 1966 aaKnown RBP9.03□□□□□ -0.96
DNMT1-220ENST00000589351 KIF14Q15058 1648 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 J3QL48 77 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 SEMA3EO15041 775 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 FECHP22830 423 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms